BGIOSGA001619

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Revision as of 10:23, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA001619| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA001619, complete gene.| tag = OsI_019...")
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Gene Name

BGIOSGA001619

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA001619, complete gene.

LocusTag

OsI_01976

Ensembl Transcript ID

BGIOSGA001619-TA

Ensembl Protein ID

BGIOSGA001619-PA

Length

7469

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:17053237..17060705

Sequence Coding Region

17060490..17060705,17057996..17058114,17057653..17057759,17057430..17057538,17055779..17055785
,17053237..17053701

Genome Context

<gbrowseImage1> name=IndicaChromosome01:17053237..17060705 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:17053237..17060705 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGAGCCGCACGAAGAAGATGAAGTCGAAGATGCCGAAGAGTTTGAAGAGGTGTTCACCGTGGAAGACTTAATCGTAGAGGATGATATTTTTGAAGAAATAGTAGCAGAGGGATTCAAGGCCGACATGGACAGAGAAGCATCGAAGCATCGACTGTACATCGCCGACGTCGACAGAGTGGACCAAGGAGGTACATACCAAGGAATCGAGAACAAGGTTTTTTCCTCCATCGTCATCGGCCCATCAATGGCAGTTCGTCCCACATCGATTGCCATATTGGCAGCATCAATACATAGCATCATCTCGATGGTCTGCGAGCTCGAGCTCGAGATGTGTTACATAGTTCAAGTCGTCATTCATTACTTCGACAAACAGTCTGCCGAGTTCATCAACTCAGCTGCTGGGGCCATCACCGTCTCCTACGTCATGCAGCTACTGACTGGGAGGATATGCATAATGTGCTTTTTACAGAGGGACAATGTTCTAGGTGTTTGCAAAAAAGCACGTGTGAGGGCACAAATCCATACTAAGGCAGATCGCCAACTTATACTGTTGATGCTCAAGATCAACTACTACCCGAGGTGCCCGCGGCCTGACCTCGCCGTCGGCGTCGAGGCACACACCGACGTCAGCGCGCTCTCCTTCATCCTCCACAACGGCGTGCCGGGGCTGCAGGTGCACCACGCCGGGAGCTGGGTCACCGCGCGCCCCGAGCCGGGCACCATCGTCGTCCACGTCGGCGACGCCCTGGAGATCCTCACCAACGGCCGGTACACCAGCGTGCTCCACCGCGGCCTCGTCAGCCGCGACGCCGTGCGCCTCTCCTGGGTCGTCTTCTGCGAGCCGCCGCCTGAGTCCGTGCTGCTGCAGCCGGTGCCGGAGCTGCTCGCCGACGGCGCCGACAAGCCGCTCTTCGCGCCGCGCACATTCAAGCAGCACGTGCAACGCAAGCTGTTCGAGAAGCTCAAGGATCAGCAAGACAACAATGCCGCAGCTGCATCGAACGGAATGAGAACTAAATAA</cdnaseq>

Protein Sequence

<aaseq>MEPHEEDEVEDAEEFEEVFTVEDLIVEDDIFEEIVAEGFKADMDREASKHRLYIADVDRVDQGGTYQGIENKVFSSIVIGPSMAVRPTSIAILAASIHSIISMVCELELEMCYIVQVVIHYFDKQSAEFINSAAGAITVSYVMQLLTGRICIMCFLQRDNVLGVCKKARVRAQIHTKADRQLILLMLKINYYPRCPRPDLAVGVEAHTDVSALSFILHNGVPGLQVHHAGSWVTARPEPGTIVVHVGDALEILTNGRYTSVLHRGLVSRDAVRLSWVVFCEPPPESVLLQPVPELLADGADKPLFAPRTFKQHVQRKLFEKLKDQQDNNAAAASNGMRTK</aaseq>

Gene Sequence

<dnaseqindica>1..216#2592..2710#2947..3053#3168..3276#4921..4927#7005..7469#ATGGAGCCGCACGAAGAAGATGAAGTCGAAGATGCCGAAGAGTTTGAAGAGGTGTTCACCGTGGAAGACTTAATCGTAGAGGATGATATTTTTGAAGAAATAGTAGCAGAGGGATTCAAGGCCGACATGGACAGAGAAGCATCGAAGCATCGACTGTACATCGCCGACGTCGACAGAGTGGACCAAGGAGGTACATACCAAGGAATCGAGAACAAGGTCATGATGATCTTGTTGCTAATTATTTTTCCGCAAATCTGCTAATTATTTTTCCGCAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGAGACGTTATCAACATTAGGCAAGCTTGTGTTATCCTTCACAATATGATAGTTGAAGATGAGAAGGACTCAGTTAGGGATGTCTTGGATTTGAATGAAAATCCAAGTGCGACGATAGTGATCCCACCAGAAGTGCGTACAAATGATGACCCTAATCCAAGCTTTGCAGAGGCACTTCGTAGAAATTCGGCTATCAAAGCTCGACCAACACATAGGCAACTTAAGAAGGATCTAATCGAGCACATATGGCAACGCTACGGAAACAAAGAAAATTAGACAAAAAGCATTGTAACTATATATAATATAATTATTATATATATGGTTTCTAAAAATTATTGTAATCGCGTTTCTATTATTTAATCTTCATATTTATTCTATCAATTAGCCACACAATGGTACATACAAATACATTTATAGTTGATCTAAGCTACATGCAAAGCATTAAACAGCTTACAGATGGCCCCTCTGTTTGTGGGTTGTATGAGCTGTCTTTATATCTATCTGTATGAGAATTTCGAGTTTCTGCAGACGACCCACCGTCTGTGGGTTGTACATGCCCTTATGAGAAAGTGGCCGCGCGACCAGCTAGTTTGCGTGCCTTATGAGTGCACGAACCACGGAACCAGCTGATTTAAGAATCTTTGATGCATGTTTTGTTTTCGTCACCACTATTACAATACGGTTTTTTTTCGTGATAGTTAAAATAGGTTTTAACAGGCTGTCAATAGGGTCACCAGAGACCAAAGGCCAAAAAAAGAAACATAATTTTCACTGATCGATCAAGTTTTCTCGAAATAAATTGCCGGTTACGTTCAGCATCTCCAATTAATTAAGGTGCACGTACAGATATCTATAAACGCGAATATTAGAGAATGGCCTAATATTAAATAATTAGAAAATATGAGACTTTGAACTCAGGTCGTTTAGCTCACCATCTTGTAGAGCTAGCTAGAATATCCCTAGGTATTTCTAGTACATATCTCTTGGCACTACTACAAAATAGGGATTCGGTGCTGGTTGGGAAACCCCCTTCAGTGCCGGTTTTCCTAATCGGCACCATGAAGGCGACACAAATCACAGGAGATTAAAGATGCCGGCTTCAAAACCAGCACCTTTGAGACGCACACGAACCAAAAAAAGATCGGCCGATGCATCAAGCCGTCAAGCCGATCCCAAATAATACCTAAATCCCAAAATTGCATCAAATCCATGAACACATGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTGCCACCTCCGCCGGCTAGCCGCCAACCGCGGGAGAGAAGGGAGGGAGAGAGAGGAAAGGGATGGAGAGAGAGAGAGGACGCGAGTGGATGCATGGATGAGGAGGGACCGAGGGAGTTGAACCTTATCGATCGCCTCATGCTGGAGGGGCCCACCGGCTCGGCTCAATTCATAAGTGTCGGTTTTTAATTTACCGACACCTATAATATATTAAAGGTATCGGTTTTTTAAGAAAACCAACACCTATAGAATAGGTGTCGGTTCTTATTTAGAGCCGTTTTTTGCGATTTCAACCCATGGAAGTGGGAAAAGGCTTATAGGTGCTGGTTTTAGCACTTCCGGCACCTATAGTGCCGACACATATTTGATGTTTTATAGCTGTGGGAGGACGGTTAAGTTTTCTAAAAAAAAATTTGCAGGTTACATTGAGCATCTCCAAAATATTAATCTCTCTAAACGTCGTGGGAGTGCTGGAAAATTTGGGCGCCACGTCATTGGTTTTTTTTTCCAAAAACACCCCGTTCTTCCGGTTAATCACGTCCGAGTTTCACCTACCATGGCGCCGTTCGATGCCGCATTGGGATCGATCCAGTCGTCCACCTGGCCTACGGTGCCGGTTCTTCCACCACCATCAGATCGATGAGAGGACAACAGACGGTCAAGATCTTCCCAACATATCCCCACACAGCCAAAACCCTAGCAGCGCTCGCGGCCCGCTCGCATATGGCCTCATCCGCCGCCACGCTGCTGTAGCCCTCTCACGGGCGGACGGCGACGCATCGGCGCACGCAGCCGGGCGCCGGTTCCCGGCTCACGCAACGGAGTGAGGGCATGGCGTGCGTTCCCCTCTCTTTCCCTCCCCTTCTCTTCTTCTCACTCTTCTTGCGCCCTCGCAGGTTTTTTCCTCCATCGTCATCGGCCCATCAATGGCAGTTCGTCCCACATCGATTGCCATATTGGCAGCATCAATACATAGCATCATCTCGATGGTCTGCGAGCTCGAGCTCGAGATGTGGTATTTACCCATATCATGCGAATCATTTGAGCCTTCCGGATCCCAACTCCTGAAGCGTCCAGGGCGTATCTGTCTCCATCGTTAGGCGCTGCTGTTGTTCAGACAAGCTGATCTACCGTCTCTCCTTTCAAGGTGAACACCTATGCCCACTCTTCCCTTCCAACCCCGTTTCTTCTACTTCACCCTCACTCCATCATTCCCCATTTGCATGAATAGTTGAATACCATTTTGTTCAGTTACATAGTTCAAGTCGTCATTCATTACTTCGACAAACAGTCTGCCGAGTTCATCAACTCAGCTGCTGGGGCCATCACCGTCTCCTACGTCATGCAGCTACTGACTGGTACCATCTTTATCCATCATTAAATAAAAATCTGGATCGATCTATGAATATCCCCTGATCCTAATTTTGCATCTTAATATTGAATCAACAATTTATTTTCTAAACTTGCTGCAGGGAGGATATGCATAATGTGCTTTTTACAGAGGGACAATGTTCTAGGTGTTTGCAAAAAAGCACGTGTGAGGGCACAAATCCATACTAAGGCAGATCGCCAACTTATACTGTCAGGACATATGTGTTTTGGTACTGTTGCTGCTTTCAAATTTATTGGTTAACTGAACTTAAAGCTGTTTTGCATTGATAATACTTCACTACTGTTTGACATATTATATTTTCCTACATGGAAGCAATTGTACGAACTAGCCGACTGATATGTTCTATTTTTCAAATTCAGCATCGAAATAAAAATAGCATATGCTTATGTTACCATTTTTCTATTATGTGGACAAGTCATAGCAAAAAAATGTGTTGCAATTCTACATAAAGTCATATCATTCAAATGGGACATTTCAAATTGCATGCTATGTAACGTCAGAGGAGCTCTTATAGATAATGTACAGACAATATGTGTTTTGAAGCTCTTTGTATTTCAAGCATTAGGTAGGCTTTTAGTCACTTACTGATTAGCATTTTTCTTTGTGTGTTTGCTCTCACTGCCCACTTAGTTCTTAATGTAGTTTCTAGATGACTTAGATTTGGCACTAATAGAACTAGATTTTAAGTTAAATGGATGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCAGTTACATAGTTCAAGTCGTCATTCATTACTTCGACAAACAGTCTGCCGAGTTCATCAACTCAGCTGCTGGGGCCATCACCGTCTCCTACATCATGCAGCTACTGACTGGTACCATCTTTATCCATCATTAAATAAAAATCTGGATCAATCTATGAATATCCCCTGATCCCAATTTTGCATCTTAATATTGAATCAGCAATTTATTTTCTAAACTTGGCTGCAAGGAGGATATGCATAATGTGCTTTTTAAAGAGGGACAATGTTCTAGGTGTTTGCAAAGAGCACGTGTGAGGGCACAAATCCATACTAAGGCAGATCGCCAACTTATACTGTCAGGACATATGTGTTTTGGTACTGTTGCTACTTTCAAATTTATTGGTTAACTGAACTTAAAGCTGTTTTGATAATACTTCACTATTGTTTGACATATTGTATTTTCCTACATGGAAGCAATTGTACGAACTAGCCGACTGATATGTTCTATTTTTCAAATTCAGCATCGAAATAAAAATTTGTTACTTAATTAGTTTTCTCAAATATGTAGAGTAAATTACCCCATAGCTAAAGTTTTCCAATCCAACCATATGCCTATCCATTTTCTTCTCTTAAATGCGGAAAACACTTTTACTAGCACTAGCACCTCAAAATTTGAGCAAGAAAAGTTATTTTGGCATCGCAACTGCGTGGTTGTTCCTTTCACCCTACTATTGATAACTTGATATGACAGAGAGATAACAGAGCTCCCAAAAGGTGTTGTAATTTTGACTGAATGTAGGATAACTGTAGTATACTTTCCTATGGGATTGTAAAATTCATTGCTTAATTTGTCAACCTTCAAACCATTGTCATCAGCAAGCATAGACTAATCTTCTTTCTTTTACTGTTGTAGGACTACTTGGGAGGGAGTTTTCAGCAGTAATATATGCAACACAAAGTATATCCGATATACTTTCCATCAGTGGGGGAGAGTAGTTTAGATGTTGGGTGAGTGCATTTCATTGCTGGAGTGTACCAGTGTAAAATGTGCTGAAATTATTTCGTAACTAATAAAACAAATTTACAACCTTTTGTTTTGTATACAGGTTGATGGTAATTAGTAAGCCTCTGTGACGTGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTTCTCTTGGACCTTAGAGCAATTATATATTAATTACCTGGGATTTATGGGCTCCAACAGCTACCCAAACCAGTCCCTAATTCTTCTGTGCCTCCGAAACCATAGAGAAATGAAGCCAGAAGAAGGGAAGGCTTAGGCGAGACCAGGGTTACCGGAGGGTCCTGTAAAAAGAAAACCACGGCAATCTCCTTAAATTCAAATAAATTTTAAAAATAATTTAAAATTTTGATAAATTTTATACAGTTTTCGTACGGTTTGCCACGGCGCGGTTACCATGGTAACTCTGGCCCTGGTGGTTTGGGAAACCCTGGGCGAGGCGCCTCCAATTCCAATCTTGTCTTCGCACGTGGGACGAGACGCTGCTCCCGTAGGAAAGGGCTTCCGCGTCGCTAGCCAACGCCGCCTCCGGTCCGCCGTCATACACCTGTTGCGTCCGCTCTAACAGCCGGCGCAGCCTCCACTCATCTCACCGTCCCCGTCCACTTCGGCCGCTAGCACAATATATTGCTCTGTCCATCGACTGTCTCCATACGCTATCTGTCTTTCACTACTGGAGAAACCATCTTTGTCTGGTCGGCCAAAATTCACAATAGTTCCGGTTCATTAAAAAAACCGGGACTAAAAATCATATTTAGCCCCGGTTGAAAAGCCCATAGCATTTTATGATCTTTAGTCCCGGTTGGTATCTTTTTACTCCCGGTAAAAAGATGAAGTGGAAGGATGAAAGCATTTGGATAATACCCAGGAGGAGGAGGAGGTGCTGAGCTTGAGCTAGCTCCAGGATGAGAGGAGGGCGCCGCCCTAGGAGCACGGGGAGCTCCAAGCTAAAGGCGGGGCTTGTACTGCTTGTGCTTCTTCAAATTTTGCCCAGCAGCCCCAAGCTTGTCTTGAATCAACCTCATGATGTAAGGGGCATAATAGATTCCCTAAGTGAAGGTCCCCTTGGAGATGGAATCTCTTGCATCATAAGAGACACAATGTCGAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCGACCTGCTCCTTCAGCTCAAGATCAACTACTACCCGAGGTGCCCGCGGCCTGACCTCGCCGTCGGCGTCGAGGCACACACCGACGTCAGCGCGCTCTCCTTCATCCTCCACAACGGCGTGCCGGGGCTGCAGGTGCACCACGCCGGGAGCTGGGTCACCGCGCGCCCCGAGCCGGGCACCATCGTCGTCCACGTCGGCGACGCCCTGGAGATCCTCACCAACGGCCGGTACACCAGCGTGCTCCACCGCGGCCTCGTCAGCCGCGACGCCGTGCGCCTCTCCTGGGTCGTCTTCTGCGAGCCGCCGCCTGAGTCCGTGCTGCTGCAGCCGGTGCCGGAGCTGCTCGCCGACGGCGCCGACAAGCCGCTCTTCGCGCCGCGCACATTCAAGCAGCACGTGCAACGCAAGCTGTTCGAGAAGCTCAAGGATCAGCAAGACAACAATGCCGCAGCTGCATCGAACGGAATGAGAACTAAATAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA001619