BGIOSGA001705

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Revision as of 10:25, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA001705| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA001705, complete gene.| tag = P0440D1...")
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Gene Name

BGIOSGA001705

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA001705, complete gene.

LocusTag

P0440D10.6

Ensembl Transcript ID

BGIOSGA001705-TA

Ensembl Protein ID

BGIOSGA001705-PA

Length

3982

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:15279281..15283262

Sequence Coding Region

15282990..15283262,15282206..15282601,15281840..15282121,15280715..15281223,15280110..15280240
,15279873..15280015,15279281..15279763

Genome Context

<gbrowseImage1> name=IndicaChromosome01:15279281..15283262 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:15279281..15283262 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGTCCGGCCCCGGCGGGCGGGAGCGGGAGGCGGCGGGGCCCGCGTTCTCCTTCTCCGTCGACCTCGCGGCGGCCGCGCGCCGGCTGCTCGCGCTCCTCCGCTCCGGGGACGGGGAGCGGGGTGGAGCTGGGGTGGTGGGGCCGCGGTCCGTGCGGAGGTACGAGGAGCTGTGGATGCCGCTCGTGGCGGCGGAGGGGGCGGGAGGGGAGGCGCCGATGCTGGTGCCGCCGCCAGACGTGCGGCTCGTCTGGCTCTGCCACTGCTTCCACCATGAGAGCTATGCTGCTTACTGTGCATCAAGGTTTGGACGCCTCATCAACCGTCCGTCGATCCTTGATGCTGATAATGAAGAATATGCCGCTGACCACTGTCGGGATGTCTGGGCTGCACACTATCCATCGGAGCCATTTGATCTTGAAGATAATGAAACTGAAGGAAACAGTAGTAATGACAAATCTGCTAGTGAAATTATCGAAATGGTTCAAAGATATACTGGCCTAGCAGCCCGCTTTGCCTCACCCTTCATCTCAGAAGGTGTCTATCATGTTGCTGCTAGGCGGAGATACATGCGTTTCCTTGAACTTATCAAGAAAATTGTGAGTACAACCCAAGGAAACACGCGGCTGGTGCCTAGCCTGGACATACTGCTAATGTGGCTTGCTCACCAGAGTTTCCCAGTGAGCTATTACGCAGACATGGCAGCGATGGCCGTCAAGGATAATGTTGCAAAAATAGTTGTGGGTTATGGGGAAGTGGTGAGTGAAGAGATGGTGGAGAGAACAAGGGTATTGTGGGAGGAGGCATACGATGAACCATACGATATGGCTGGATCGGAGATTGATAAAGCAGAAGTTGATGCAGCGAGAGAAGCATTCTATTGGGAGACAGCAGCATCAGAAGAGGATGCCAATCGACTGTACAAAGGGCTGCAACCTAGGTTCATTATGGAGGTATATGTGTTCCTGAAAGGAGAATTTGACAGTGAACACACCAGTAAGGAATTCTTACGTTTGCGGACACAGAGGTGTTACAGATCACTAAAGCTCAACATACCACTGTTCAATTTATCCTGCAAAAACTGGCAAAAAACATGGCACCTATATTGTGAGTTTTCAACAAGAGGCCTCATCATTGAGGTCAGACGCAGCACAAGTGGGTGCTTCAGGAACAGCAAGCTCATCAAGAACATCTCATTCTCATGGAGTGATATGTTGCATGAGAAATCCCTCATGCTTACAGAGGAGCTTGATGTTAGGATGAAAGCAATGGCATCAATCACCCCTCCAGTTCAAGCTCCATACTTGTTGAAGTGCGTACCTGACCGAGTCACCGATGATGGTGGGGCTATGATTTCTGATGTCATATTGCGGACAAAAGGTTACCGTCCACAAGAAGGACGATGGCTGACTCGCACGGTGCTCGATCATAGTGGGAAAGAATGTTTTGTCATTCGGATGAGAATAGGCAGAGGGTTTTGGCGGAGAGGTGCTGAAACTCCCATAGCAGTGAAATGGGAGGACAGAATCATTGAGATTAGAGAGGGTTCATGGTCATACATTGCAAATGCAAGCTCCATCGGTTATGCTCCTGAGAAGGTGGTGGGAACAGCAACCCCAGAAAAAGATCAACAGGACAACAAGGTGGTTTGGCGCTTTTCAACTGGAGATGTACTGACGGTAAAGTTGGGAGACGACTTAAACTTTCATCTTCGAAATGAAAGCTCAGGAGAAGAGGCAAGGCTTCTTGTAGGGAGGAGATTGAACTACAGAATAAACAAGGAAAGCACATTAAATGACCGCAATGATGAGGAGGAATACCTTACCCTAGTTCGTACATCACCTGATCATCTAGGTGACAGAGCAACTATGCTCCTCAACTGGAAACTACTTGCGGTAGAATTCTTACCTGAAGAGGATGCAGTTTTTGCGCTTCTCCTGTGCATGGCAATCGCACGAACCATGACAGAGATTAGGAGAGAAGATGTATCTGGGCTTTTGGTACGACGAAGAATATGTGAAACGAAGGTTGGGCAGAGAGACTGGGGTTCAGTGATGCTCCCAAACTCACCTTCTCTTGATCCTCATTTGCAACCGTGGTATCGAAATGCAGCGCATGTATTAAGCTCTGCAGAAACAGCGTCTAACGGGGTGATGCTTATGAAGTATTCACCTGCTGATGGCAAGGATGAGTTGTACAGGAAAGCTCTTATACCTTGA</cdnaseq>

Protein Sequence

<aaseq>MSGPGGREREAAGPAFSFSVDLAAAARRLLALLRSGDGERGGAGVVGPRSVRRYEELWMPLVAAEGAGGEAPMLVPPPDVRLVWLCHCFHHESYAAYCASRFGRLINRPSILDADNEEYAADHCRDVWAAHYPSEPFDLEDNETEGNSSNDKSASEIIEMVQRYTGLAARFASPFISEGVYHVAARRRYMRFLELIKKIVSTTQGNTRLVPSLDILLMWLAHQSFPVSYYADMAAMAVKDNVAKIVVGYGEVVSEEMVERTRVLWEEAYDEPYDMAGSEIDKAEVDAAREAFYWETAASEEDANRLYKGLQPRFIMEVYVFLKGEFDSEHTSKEFLRLRTQRCYRSLKLNIPLFNLSCKNWQKTWHLYCEFSTRGLIIEVRRSTSGCFRNSKLIKNISFSWSDMLHEKSLMLTEELDVRMKAMASITPPVQAPYLLKCVPDRVTDDGGAMISDVILRTKGYRPQEGRWLTRTVLDHSGKECFVIRMRIGRGFWRRGAETPIAVKWEDRIIEIREGSWSYIANASSIGYAPEKVVGTATPEKDQQDNKVVWRFSTGDVLTVKLGDDLNFHLRNESSGEEARLLVGRRLNYRINKESTLNDRNDEEEYLTLVRTSPDHLGDRATMLLNWKLLAVEFLPEEDAVFALLLCMAIARTMTEIRREDVSGLLVRRRICETKVGQRDWGSVMLPNSPSLDPHLQPWYRNAAHVLSSAETASNGVMLMKYSPADGKDELYRKALIP</aaseq>

Gene Sequence

<dnaseqindica>1..273#662..1057#1142..1423#2040..2548#3023..3153#3248..3390#3500..3982#ATGTCCGGCCCCGGCGGGCGGGAGCGGGAGGCGGCGGGGCCCGCGTTCTCCTTCTCCGTCGACCTCGCGGCGGCCGCGCGCCGGCTGCTCGCGCTCCTCCGCTCCGGGGACGGGGAGCGGGGTGGAGCTGGGGTGGTGGGGCCGCGGTCCGTGCGGAGGTACGAGGAGCTGTGGATGCCGCTCGTGGCGGCGGAGGGGGCGGGAGGGGAGGCGCCGATGCTGGTGCCGCCGCCAGACGTGCGGCTCGTCTGGCTCTGCCACTGCTTCCACCATGTGAGAGCTTTACCTGCCACCTTGGTCGCTTCAGTAAATGCGTCAGATCTTTGGGGGACTAAATGCTCGATTCCGTGGAGATATCTTCTCAACTGAGAAGCTAACCTTGTTTAATCAATATATAGTGTTTGTGCTCAATGTCATTTACTAATTGTGATCTTGAAAGACCGTATTGAGAAAAAATCAGTAATGGTATATTCACCGTACAGACTACCGTGCTTACTCTTACGGAAATTCTATGTTTTCAGATAAATCTCTGAATTGTACATCATTTCTGTATAAAAAGTCCCACAATTTTGGAAATTCAGATATACCACTTATACTGTGATTGTGGCTCATGAAACTTTCGCATGAAATGTGCCATCTCAAGTTTTCTCCTGTTCCCCAGGAGAGCTATGCTGCTTACTGTGCATCAAGGTTTGGACGCCTCATCAACCGTCCGTCGATCCTTGATGCTGATAATGAAGAATATGCCGCTGACCACTGTCGGGATGTCTGGGCTGCACACTATCCATCGGAGCCATTTGATCTTGAAGATAATGAAACTGAAGGAAACAGTAGTAATGACAAATCTGCTAGTGAAATTATCGAAATGGTTCAAAGATATACTGGCCTAGCAGCCCGCTTTGCCTCACCCTTCATCTCAGAAGGTGTCTATCATGTTGCTGCTAGGCGGAGATACATGCGTTTCCTTGAACTTATCAAGAAAATTGTGAGTACAACCCAAGGAAACACGCGGCTGGTGCCTAGCCTGGACATACTGCTAATGTGGCTTGCTCACCAGGTATGCATAGGCATGGCATCCTATGAAGCAAAACAATGCATTATGGATGTTTTAATTGACACTGTTATTATGTATCCTTCGCAGAGTTTCCCAGTGAGCTATTACGCAGACATGGCAGCGATGGCCGTCAAGGATAATGTTGCAAAAATAGTTGTGGGTTATGGGGAAGTGGTGAGTGAAGAGATGGTGGAGAGAACAAGGGTATTGTGGGAGGAGGCATACGATGAACCATACGATATGGCTGGATCGGAGATTGATAAAGCAGAAGTTGATGCAGCGAGAGAAGCATTCTATTGGGAGACAGCAGCATCAGAAGAGGATGCCAATCGACTGTACAAAGGGCTGCAACCTAGGTTCATTATGGAGGTATATCCAAGGCTAAGATTTCCTATTGTTGATTCCTCAAGTAGTTGGTGTACAGGTAACTGGCTAATCATGTTCATTTATTTACTTTGTTGTGGCCATCAAGCCTGTACCAGATATAATGATTTTAACATCGATATAATATCTGACCAAAAGGTTCTATAACTACAATTTCCACACTCAAAATTGATATTAGATGTGCTTCTATGCTATCCTTATACAAGACTAGTGCAGACTTTTTCAACCACTTGATGAGTTTATTTCCCTCTAGCCATTAGCAATTGCAACCGCTTTATAATCGCGGGATACTCTTCGAGGAAAACACAAACACCCTTTTGTAGTTTTCATTGCTTAAAAAAATATACATATCAGAAACAGCCTGAAAGTCTCAAACTTCTTACAAATGGTTTGATGCTAACTTCAGCTCACACACCCACTGAAAATTCGAAAAAAATCTAAATAAGACATAGTGTACCTCCTTAAGAGTAAAATGAAGTTTTCCTTCTAAATTCGTTATATGATCATGCAAGGGAATTCTCACAAAATGTTTTGTCTTTCTATCGTAACTAATATATTCCTTATATATTGGTAATATGATATAAATTATTCTTGATTGCAGGTATATGTGTTCCTGAAAGGAGAATTTGACAGTGAACACACCAGTAAGGAATTCTTACGTTTGCGGACACAGAGGTGTTACAGATCACTAAAGCTCAACATACCACTGTTCAATTTATCCTGCAAAAACTGGCAAAAAACATGGCACCTATATTGTGAGTTTTCAACAAGAGGCCTCATCATTGAGGTCAGACGCAGCACAAGTGGGTGCTTCAGGAACAGCAAGCTCATCAAGAACATCTCATTCTCATGGAGTGATATGTTGCATGAGAAATCCCTCATGCTTACAGAGGAGCTTGATGTTAGGATGAAAGCAATGGCATCAATCACCCCTCCAGTTCAAGCTCCATACTTGTTGAAGTGCGTACCTGACCGAGTCACCGATGATGGTGGGGCTATGATTTCTGATGTCATATTGCGGACAAAAGGTTACCGTCCACAAGAAGGACGATGGCTGACTCGCACGGTGCTCGATCATAGTGGGAAAGAATGTTTTGTCATTCGGATGAGGTACTGTTCAGGAAAATGTGCCAGTAAAATGCATTTGATACACCTTCAGGTTCTACTGCTGAAGTTTTTCTTGGTGGACTATCCCATGCATTGCAACAGGTTTCAAATAAATATATCATAAATTATAAACATAAAAATGTATATAAAACAAATAATAGTATTACAAACCACATCTGTAAATGACCAGTTGTCCACAAAGATCGTACTGACTCAAGAGGTGATGCTGGGATGATAGGCTCACTACTACTACTAGGTTGCTTTTACATAGTAGTGATAATAAGCGTTTTGTTTGTTCATTTGAGTTCATATCATATCCAAATGAACCATGCAAACCAGACTTAAATATTTTCCGTTTATATCAAGTTGAGATCATATGCTGAATTTTGACACTGGCATGCTTAATCTTTGGAGGGGAATGATGTTTTCTTCTATATCTTAATATGCTTCCGCTGAACTTAGCTGCAACTTGTGTAGAATAGGCAGAGGGTTTTGGCGGAGAGGTGCTGAAACTCCCATAGCAGTGAAATGGGAGGACAGAATCATTGAGATTAGAGAGGGTTCATGGTCATACATTGCAAATGCAAGCTCCATCGGTTATGCTCCTGGTAACTTCAGTATGCAAAATAATTGGTTCTGGTTTGGTACATATCATATCTTGTCTTAAGGGCAGATGCTTATTGCTTTCACTTTGTGGTGCAGAGAAGGTGGTGGGAACAGCAACCCCAGAAAAAGATCAACAGGACAACAAGGTGGTTTGGCGCTTTTCAACTGGAGATGTACTGACGGTAAAGTTGGGAGACGACTTAAACTTTCATCTTCGAAATGAAAGCTCAGGAGAAGAGGTATGGTGTCATAAGCTCCTCCGTCTCTGCGCATTCTGTGTGGAATTGGATTTAGAATGGAGTATCTTGGCTTTCATTCTAACTGCATTGCAATGAACCATATTACCAGGCAAGGCTTCTTGTAGGGAGGAGATTGAACTACAGAATAAACAAGGAAAGCACATTAAATGACCGCAATGATGAGGAGGAATACCTTACCCTAGTTCGTACATCACCTGATCATCTAGGTGACAGAGCAACTATGCTCCTCAACTGGAAACTACTTGCGGTAGAATTCTTACCTGAAGAGGATGCAGTTTTTGCGCTTCTCCTGTGCATGGCAATCGCACGAACCATGACAGAGATTAGGAGAGAAGATGTATCTGGGCTTTTGGTACGACGAAGAATATGTGAAACGAAGGTTGGGCAGAGAGACTGGGGTTCAGTGATGCTCCCAAACTCACCTTCTCTTGATCCTCATTTGCAACCGTGGTATCGAAATGCAGCGCATGTATTAAGCTCTGCAGAAACAGCGTCTAACGGGGTGATGCTTATGAAGTATTCACCTGCTGATGGCAAGGATGAGTTGTACAGGAAAGCTCTTATACCTTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA001705