BGIOSGA001730

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Revision as of 10:25, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA001730| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA001730, complete gene.| tag = B1088D0...")
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Gene Name

BGIOSGA001730

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA001730, complete gene.

LocusTag

B1088D01.9

Ensembl Transcript ID

BGIOSGA001730-TA

Ensembl Protein ID

BGIOSGA001730-PA

Length

4000

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:14634952..14638951

Sequence Coding Region

14638751..14638951,14637029..14637223,14636713..14636829,14636478..14636627,14635576..14635634
,14634952..14635087

Genome Context

<gbrowseImage1> name=IndicaChromosome01:14634952..14638951 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:14634952..14638951 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGTGGTGGTGACGGCGGCGGCGCCGCCTCTCGGCATAGCGTTGGTGGGGCCGACGCGGGCGAGGCGTGGAGGAGGGTTGTCGCTCTCCTCCTCCTCCTCCTCCTGCTGCTACCTGTCCATGTGCGGCCGTGGCGTCCTGCGAGGGGGATGCGCGAGGATGAGGGAGCCGCTGCCGCCGGCCCCGATTGGGCTGGACCGGTTTCTCTGCGGATACATGCGAAGAGATGGGCATGAAGATGGTGAAAGGAGTCAAGGAATAGAGGATTCTCTTATGTTTGGGCCAGACGATGATAATGGTTCAAATATTCCTACTCAAGTTGAGACACTTGTTAGGGGTACTGCGACGGTTGCTACTCCAGAGTATAAGTCGATTCCAGATCTAGATTACCTGCAGGAGTTGCTGGCTATTCAGCAACAGGGACCGCGGGCTATAGGTTTTTTTGGTACCCGTAACATGGGGTTTATGCATCAACAGCTTATTGAGATCCTGAGCTATGCTATGGTCATAACGAAAAATCATATATTCACATCTGGTGCTTCTGGGACTAATGCAGCTGTTATCCGGGGTGCTTTAAGGGCTGAAAAGCCAGAGTTGCTCACTGTAATTTTACCTCAAAGTCTAAAGAAGCAACCTCCTGAAAGTCAAGAGCTTTTATCTAAAGTACAAAACTTAATTGAGAAGCCTCAATATGACCATTTGCCACTAATTGAAGCGAGCAGGTTATGCAACATGGACATCATCTCGAAGGTCCAACAGGTGATTTGTTTTGCATTCCATGACAGCAAGCTGCTGATGGAGACCTGCCAGGAGGCCAAGAATCTCCGGAAGATCGTAACCCTATTCTACTTGGATTAG</cdnaseq>

Protein Sequence

<aaseq>MVVVTAAAPPLGIALVGPTRARRGGGLSLSSSSSSCCYLSMCGRGVLRGGCARMREPLPPAPIGLDRFLCGYMRRDGHEDGERSQGIEDSLMFGPDDDNGSNIPTQVETLVRGTATVATPEYKSIPDLDYLQELLAIQQQGPRAIGFFGTRNMGFMHQQLIEILSYAMVITKNHIFTSGASGTNAAVIRGALRAEKPELLTVILPQSLKKQPPESQELLSKVQNLIEKPQYDHLPLIEASRLCNMDIISKVQQVICFAFHDSKLLMETCQEAKNLRKIVTLFYLD</aaseq>

Gene Sequence

<dnaseqindica>1..201#1729..1923#2123..2239#2325..2474#3318..3376#3865..4000#ATGGTGGTGGTGACGGCGGCGGCGCCGCCTCTCGGCATAGCGTTGGTGGGGCCGACGCGGGCGAGGCGTGGAGGAGGGTTGTCGCTCTCCTCCTCCTCCTCCTCCTGCTGCTACCTGTCCATGTGCGGCCGTGGCGTCCTGCGAGGGGGATGCGCGAGGATGAGGGAGCCGCTGCCGCCGGCCCCGATTGGGCTGGACCGGGTACTTGCTTCTCCCACTCGTATTGCTGTTTCCTTTCCATCCTTGTTGCGACCTGTGCTTGCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTGTTATCGTCGGGATAGGATCATGGACTTGTGTCCGCGGGGGTTTAGATAGTTTATATATTTCTGAAATTACCAGAGGCAAGGCAGTGTTCGTTTTCCCGGTTCTTGTCCTTGCTCGACGACAATTTCCTGATGCCAGTGAGAAACTAATCTTGCACAATCTAGTGAAATGTCAGTCCAATATATTCATCTCAAACCGAAAAATATGGGAGGAAAAATGGCTATTGTGGGAATTATGGTCTTGACTGAGCATCTGTTGTGACATCAAACTGCACCCCAGTGATATTCTGCCTCAGTTTTACACAAGTTACTAATATCCTATAGTCCAAGAAGACACTAAATCTTAAGGGGGGAAAATAATGATAGTGCTAAATGACCATACATACCTCTATTGGATGGCGTACAACGACTGTGCAGCCACTTAATTGCATTAGTTTAGGGGCTGAGAATGGACAAATTAAAATAATTATGCACTTGATTTCTTCGGTGGCAAATTTGAAACGATACATCCAGAGAGAGTGGACAGACATTGTGAAACCAAAGGAGCGGTATGATGGATGTGACATTTACTGAAAACTGAAGCTTTTTTACATTCCACAGTAATCATGGTCTTGTTACTGTTCTTTGCTAGGATCTAGATTCTATGTAATGGCGCCACTCATGACTTTCCACCATGTTTGCTGTTTCAAGTGGATAATTTCCCACCTCAATCGCAAACATTGGTTCATAATTAAATGGTGCGTAAGCACTTACTGCAGTCATTTGAAGAAATCTTTATGGTTGGGATTTTTACCGTTTGAGTATTATGGTCTGGATATCAGAACCCACAATGCACTAGAGTAAAAGATTCTGTGTCTAAGTAATGTACTCTACATGAAAAAAAGTTCTCATTTTGCACTACTTGCCAGATAGAGAATCAAAGTGTGGTATGGTATGTCTCAAAGGCTAACCTAGAGTCACTTTACTGTTGATCTTGGCCATTTATTCAGAATCCAATGCTTGCTAATCTAGCATACCTTTAGGGAGCTTGTTGGCTTGAAGATTGAGTCCATGAACCATTTAGTTTTTTGTTTGGGGAATGGAATGAGTTGGTCAGCCATCCCTCAAAAAACACATCGGTGTACATAAATGATGAATGGGATCATCTTACCAAAATCATGGGATTATCCCATGTTGGACCAACTCATCCTAGTTTGGCTTGATTCCTCAAAACAAACATTCCACTAGTATTTTTCTTAGTTTTCCCACACATGTTTCTTCTAAAGCGGCAGGGTGCATGCTGTCATTCCAGAACGACTTGATGAGTTTGGCCAATTTTCACAATTGGGAAAAGGTGCAACATAAAAAAAGTTAGATTCATTGATGCTAGAATGATGTAATATAATCGGTTTTCACTAATGATTTACTGCCAGGGGCTGTTTTTATTGTGCTCGTATAGTTTCTCTGCGGATACATGCGAAGAGATGGGCATGAAGATGGTGAAAGGAGTCAAGGAATAGAGGATTCTCTTATGTTTGGGCCAGACGATGATAATGGTTCAAATATTCCTACTCAAGTTGAGACACTTGTTAGGGGTACTGCGACGGTTGCTACTCCAGAGTATAAGTCGATTCCAGATCTAGATTACCTGCAGGTGGCTTTCTCTTTCCTTTTTCTATTGTGTCCATTCAATTTAACAAAGTCAGTTTTTGCCTAGTAGTTTCTGTAAATATGTTTGGGGCCAACAGATATCTTCCATGCTGTTCATCCTCATCCAGTGAATGATAAATAGCATAACATGTATGAAATTATTTATATTATAGAATGATCTTATTCACTTAGTGGTAATGCAGGAGTTGCTGGCTATTCAGCAACAGGGACCGCGGGCTATAGGTTTTTTTGGTACCCGTAACATGGGGTTTATGCATCAACAGCTTATTGAGATCCTGAGCTATGCTATGGTCATAACGGTATGTCACAGAGTCTTATGGTATAATAGTTCTTCCAATATTTGATTCATGTACTACTCTAATTAATATTATTTGTTGGCTGCAGAAAAATCATATATTCACATCTGGTGCTTCTGGGACTAATGCAGCTGTTATCCGGGGTGCTTTAAGGGCTGAAAAGCCAGAGTTGCTCACTGTAATTTTACCTCAAAGTCTAAAGAAGCAACCTCCTGAAAGTCAAGAGCTTTTATCTAAAGTAAGATTTCATGATATTCCAGTCCCGAATTGATCATTTCTTACCTGTTCCATTTTTATCAAAATCTTTTACTAGAGAGCTCTACATGGACCAGTTTCTCTTCTGTGATTTTGTATTGCTAGATGCTGCTATAGGCACAGAAGTCCCAACATTTTTGGCAATAAGTTATGGGAAGGATTTATTAAGTGGGAACTCCATGTCAAATGGGAGAAAATGGACTCTGAATCCTTTGATCAACTTGTGGACGATTTGTGTTTATAGAATCTTTATTATGGTCAAAGTAGATGATTATCACTACCACACCAATTAAATAGCTTGCAATTGTAACTCATGAATTCATGTGCTTCCATTATCAGCAGAGTTTTCACCAGAACTTAGAAATGAGGCCCCTTGGAACCCAGAAAAGCATGCATTTCTTTAGTAGTGTTCCTCTATTACTAAAAGGTTGTTTAATCAATTATGCTAAAATTCTGTCTTGTCATCTCCAGTCCTCTATCCTTTTGGTTTGCCATAGGTTCGGTCTTACATCAGGTATTCATGGTCTTTTTGTATTCTTTGGATATTTCCTAGCTATCTTTATCAAACATGAACATCATTTTTTTAAGGATATGAGTTCAGGTTATTATAGATGGTGTGAGAATGAAATGTATCATGAATTCTTCATACACCATATAAAGTATCCGACAGTTCTTAGAAGCTGACCAGACCTTCACCGTAACTTTTATTGAATTCCAACAATGTACCTCTGCAGAAAACATCATTGTTTTGCTTTACCATGTAAAGCTAATCTTTTGTCCATATGGTAAGCTGAATATGATTCGGTGGGATTTTGAAATTTTGTAGGTACAAAACTTAATTGAGAAGCCTCAATATGACCATTTGCCACTAATTGAAGCGAGCAGGTATGTCAGCTACCTTTTCAAGTTATATTTGTGATTTTTTTACTTCTCATTAAATTTATGTCATTAGGTATTGTCAATCATCATAATGTAGTGTTTTCTGAAAGCAGTTAAAAATTGCTGCAGCTTGCAGCGACTTTGTGCTTCGGCAGCCGCAGCGGCTGCAGCTGCTATGGCTACCGAACAGGGGCCATTTTATAGACATAGGATATTTGATACATGGTCCTCTATAAGCCTGGCAATGGGTTGGCCTCATCTTTTATTTTCATCAGTTGCTTGCTGTAATAGAGATCATGATTTTCCTTAACTAATTTTATTCCAGACAAGTGCTTAAGATATGAAACATTTGCTTGTGCCATTACACAAATATATCATATACCAGTTCGGTAATCCTTAATCCACTGGCTCCTGCATAAACAAAACATTCTAATAGCTACTGGTGCAATTAGAATTAGCAGCTATTGGTGCTTAATATGTATCACAATATTCAGGTTATGCAACATGGACATCATCTCGAAGGTCCAACAGGTGATTTGTTTTGCATTCCATGACAGCAAGCTGCTGATGGAGACCTGCCAGGAGGCCAAGAATCTCCGGAAGATCGTAACCCTATTCTACTTGGATTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA001730