BGIOSGA001754

From RiceWiki
Revision as of 10:26, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA001754| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA001754, complete gene.| tag = OsI_016...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA001754

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA001754, complete gene.

LocusTag

OsI_01689

Ensembl Transcript ID

BGIOSGA001754-TA

Ensembl Protein ID

BGIOSGA001754-PA

Length

2842

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:13910278..13913119

Sequence Coding Region

13912859..13913119,13911374..13911517,13910278..13911129

Genome Context

<gbrowseImage1> name=IndicaChromosome01:13910278..13913119 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:13910278..13913119 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGCTCGCAATCCTGGCGAGGAGGCGGGCGGCGGAGGCGCTGCTGCGGCGGCCGCTGGGGGCGGCGGGGGTGTCGGCGCTGAGGGCGTCGTACGCGGCGGTGGCGGGGGAGGAGAGCGACGTGGTGGTGGTGGGCGGCGGGCCGGGAGGGTACGTGGCGGCGATCAAGGCGGCGCAGCTGGGGCTCAAGACCACCTGCATCGAGAAGAGGGGCACCCTCGGCGGGACATGCCTCAACGTCGGCTGCATCCCCTCCAAGGTTTCTTCTTCTGTTACCGGTGAATTACTAGAGCATGAAGCTCCACCTTCGACCCCCGGTCTTGATTGGTCCCAGCTTCCTGCGGACCTTCTCATCTGCATCCTTGGCACGCTGGAGATTCCAGATATTTTCAGCTCCGGCGTGGCACAGATCACCATGCCGCCACCGGAGACAATAGCAAATGTCAGGATACGTTGCAATGGTGAGGGTGTGCCAGATGGCTATGATCTTTTTACAATGGATATGTCATCACGGGATTTTGATACTGAAACAGAGCCGAATGATCTTTCCTGGGAAGAAGGCCGATTTTATTTCTATAAGAGGGTTGTTCTGACAGCAGATCCATCCAGTAGAAACTGCACAGTAATGATCCTGCACCTGCTAGATGATTTCCTTTCCTATGCAAGGGTGGGTGACAATCATTGGACCTGGATCGATGTTGATGAGCTATGTTGCTGCTATCATGATGTTTTGTACAAGGACGACGATAGATTGTTCTCTGCAATCCGAGCCACTGGTGATGTTCATGCTATTGATACCAATGGACCCTCTCCAATGTTACGGGTCGTCCTAGACACCAAGAATTCACTCATCAATAATACCAAGTATATTGTTCTGTCAGAATCAGGTGATCTTCAAGTATGGAGGTATTATAAACACGTCAATAACGACAGGAGGACCAGAGAATTGATTGTCTATAAGGTTGACCTTGGTGAACAAAAGCTTGCTGAACTTAAGGATTTTGATGGTCGTGCGCTATTTATTGGTTTCAATAGCTCGTTCTTCCTACGGGTAGAAGATTTCCCAATGTTAGCTCCAAATAGTGTCTACTGTACAGATGATTCAATGGAATATATTTATTGTGTGAGGTTTGGTTTCCGAGAGGTTGGTGCCTTCCATTTGGATGATAGTAGCTTCACTGATCAGCTTATTGGCTCACGGTTGAATTGGCCATCTCCTATTTGGTTTTGGCCATCATTTACTAAAGTTAATTAG</cdnaseq>

Protein Sequence

<aaseq>MALAILARRRAAEALLRRPLGAAGVSALRASYAAVAGEESDVVVVGGGPGGYVAAIKAAQLGLKTTCIEKRGTLGGTCLNVGCIPSKVSSSVTGELLEHEAPPSTPGLDWSQLPADLLICILGTLEIPDIFSSGVAQITMPPPETIANVRIRCNGEGVPDGYDLFTMDMSSRDFDTETEPNDLSWEEGRFYFYKRVVLTADPSSRNCTVMILHLLDDFLSYARVGDNHWTWIDVDELCCCYHDVLYKDDDRLFSAIRATGDVHAIDTNGPSPMLRVVLDTKNSLINNTKYIVLSESGDLQVWRYYKHVNNDRRTRELIVYKVDLGEQKLAELKDFDGRALFIGFNSSFFLRVEDFPMLAPNSVYCTDDSMEYIYCVRFGFREVGAFHLDDSSFTDQLIGSRLNWPSPIWFWPSFTKVN</aaseq>

Gene Sequence

<dnaseqindica>1..261#1603..1746#1991..2842#ATGGCGCTCGCAATCCTGGCGAGGAGGCGGGCGGCGGAGGCGCTGCTGCGGCGGCCGCTGGGGGCGGCGGGGGTGTCGGCGCTGAGGGCGTCGTACGCGGCGGTGGCGGGGGAGGAGAGCGACGTGGTGGTGGTGGGCGGCGGGCCGGGAGGGTACGTGGCGGCGATCAAGGCGGCGCAGCTGGGGCTCAAGACCACCTGCATCGAGAAGAGGGGCACCCTCGGCGGGACATGCCTCAACGTCGGCTGCATCCCCTCCAAGGTGACCACGACGATGCTCTCCCCCTCGTCCCTCCCCCTCTTTTTCGATCTCCTCTCTACTGTCTTGCGGGTTCGGTTGAGGTGGATGCGATTTTAGATCTACGTTTTCCAACCTTATTATTTCGGGTTGATTGATGGTATCTGCTGGTAGGGCGAGTTGTTGCGATGCGCGTTGAATTGAAATTCTGGTCGTGCGGAGGATACGCGTAATTTCGAGGAGCATTTTGCGCTGTGTGGTTAGATTTGAGTTCCCTTGTTAATATTTTGGCATGAATGGTCTGCATATGTGTGACATCTGATGTAATTTGGTGTTTCAAATTTACTGTCAAGCATTTGAATTATAGAGGAGTAATGCCTTTTGTGCAATATGCTGCATAATTGTAGTCTTTTGGATTCTTAATCTTGTACCCGTCCATTTGAAAATTCCTGGAAGACACCTTTCCTAGAGTGTTGTTAAAATTCTGCCAACTCGATGGTTGGGTGGTTGCCATCCATCTAATAAACAAAATAATCCTAAATTGATGGCACAGCATCGTCCTAATCTGATAAACAAAATAATCTTAAATTGGTTAACTGGTGTAAACCAATAGGATTAACACACTGATGTGTTATGGCTCAACAGATCGTTACTAATCAACAGGTGCTGCATATTTCGTTTTCATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAGGAGAGGAGGACCAGTGAATTGGTTGTTTATAAGGTTGATCTTGTTGAACACAAGCTTGTTGAACTTAAGGATTTTGAAGGCCATGCATTGTTTATTGGTTTCAATAGCTCCTTCTTCCTACGAGAAGAAGATTTCCCCATGTTGACTCCAAATAGTGTCTACTGTACAGATGATACAGTTACTTATATTTGTCATTCAAGGTTTGGCTTTCGAGAGGTTAGTGCCTTCCATTTGGAAGATAGTAGTTTCACCGATCTACTACCTATTGGCTCACGGTTGAATTGGCCACCTCCTGTTTGGTTTAGGCCATCATTTTCTAAAGGTAAATAGAACCATTGCTTCGAGTGTTACATATTTCTGTTTATTTACATCTCTATCTATTCATATTCTCTTGTGATAGGTTATATAACTATTTTGCAAGTTATATTGGCAATAGGGAACTTTTGATTGAAACAGTGAGCTTTGGCTATACATCACTTAGATCCATCAACATTTGTAGTTTTTTCATGTTTTGTTAGAGCAATCTTTTGATTTAGTACCACGTTCAGTTTCTCAGATCTTTCTGTTCGTTTTTCAGGTCCACTATGACATAATTCTGCAGATTGATTGATCTGATCAATGGAGCAGGTTTCTTCTTCTGTTACCGGTGAATTACTAGAGCATGAAGCTCCACCTTCGACCCCCGGTCTTGATTGGTCCCAGCTTCCTGCGGACCTTCTCATCTGCATCCTTGGCACGCTGGAGATTCCAGATATTTTCAGCTCCGGCGTGGTTTGCCGCTCGTGGCATGCCAGCTATCTAGAGGCTTGCCGCCTCGGTATTTGCTCCAATAACCCTGGGCCCTGCCTCGTTTTCTCGTCCAGCGACCGTGATCCTAGCATCACCACACTTCACAGCCTCACCACGGGGAAGGATCACTATGTAACCATGCCGGACCCTCCTTTCCGTACACGTTACATTGTCGGATCCTCCCATGGAGCGGTCTAATCTGCTCCTTGTCAATCATGCGACTCAGGCACAGATCACCATGCCGCCACCGGAGACAATAGCAAATGTCAGGATACGTTGCAATGGTGAGGGTGTGCCAGATGGCTATGATCTTTTTACAATGGATATGTCATCACGGGATTTTGATACTGAAACAGAGCCGAATGATCTTTCCTGGGAAGAAGGCCGATTTTATTTCTATAAGAGGGTTGTTCTGACAGCAGATCCATCCAGTAGAAACTGCACAGTAATGATCCTGCACCTGCTAGATGATTTCCTTTCCTATGCAAGGGTGGGTGACAATCATTGGACCTGGATCGATGTTGATGAGCTATGTTGCTGCTATCATGATGTTTTGTACAAGGACGACGATAGATTGTTCTCTGCAATCCGAGCCACTGGTGATGTTCATGCTATTGATACCAATGGACCCTCTCCAATGTTACGGGTCGTCCTAGACACCAAGAATTCACTCATCAATAATACCAAGTATATTGTTCTGTCAGAATCAGGTGATCTTCAAGTATGGAGGTATTATAAACACGTCAATAACGACAGGAGGACCAGAGAATTGATTGTCTATAAGGTTGACCTTGGTGAACAAAAGCTTGCTGAACTTAAGGATTTTGATGGTCGTGCGCTATTTATTGGTTTCAATAGCTCGTTCTTCCTACGGGTAGAAGATTTCCCAATGTTAGCTCCAAATAGTGTCTACTGTACAGATGATTCAATGGAATATATTTATTGTGTGAGGTTTGGTTTCCGAGAGGTTGGTGCCTTCCATTTGGATGATAGTAGCTTCACTGATCAGCTTATTGGCTCACGGTTGAATTGGCCATCTCCTATTTGGTTTTGGCCATCATTTACTAAAGTTAATTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA001754