BGIOSGA001930

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Revision as of 10:28, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA001930| Description = BGIOSGA001930| Definition = Oryza sativa Indica Group BGIOSGA001930, complete gene.| tag = | tid = BGIOSGA001930-TA|...")
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Gene Name

BGIOSGA001930

Description

BGIOSGA001930

Definition

Oryza sativa Indica Group BGIOSGA001930, complete gene.

LocusTag

'

Ensembl Transcript ID

BGIOSGA001930-TA

Ensembl Protein ID

BGIOSGA001930-PA

Length

4620

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:10021206..10025825

Sequence Coding Region

10025618..10025825,10025486..10025515,10024992..10025068,10024579..10024737,10023785..10023814
,10022900..10023058,10022243..10022337,10021206..10021311

Genome Context

<gbrowseImage1> name=IndicaChromosome01:10021206..10025825 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:10021206..10025825 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGTCGTCTCTTCTGAGGAAGTCGACGGTAGTCGGCTCCCCGACGTCGCCGTCGGCGATGGTGGGCTTCCAGGGGGCTCGCGTCGGTGGGCTCCGGCTCCGACATCGTCTCGGCGGCGCCCGGCGTGTCGCTGCAGAAGGCCCGCTCCTGGGACGAGGGCGTCGCCACCAACTTCTCCACCACCCCTCTCAAGGACATCTTCCATGGGAAGAAAGTGGTCATCTTCGGCCTGCCTCAAACAGGGTGCTGCATCTAATCAAACAATCTAGTGAGGGTAATATGGTTNGGGGTTGCAATAGTAAAAACAAAAAGGGTGCATACACAGGAGTCTGTTCACAGGCACACGTCCCTAGTTATAAAAATAACATTGACAAGTTGAAAGCAAAAGGGGTTGACTCTGTTATCTGTGTCTCTGTGAATGACCCTTATGCCCTGAATGGATGGGCAGAAAAGCTACAGGCAAAAGATGCTGGGAAGAAAGTGGTCATCTTCGGCCTGCCTGGTGCATACACAGGAGTCTGTTCACAGGCACACGTCCCTAGTTATAAAAATAACATTGACAAGTTGAAAGCAAAAGGGGTTGACTCTGTTATCTGTGTCTCTGTGAATGACCCTTATGCCCTGAATGGATGGGCAGAAAAGCTACAGGCAAAAGATGCTATTGAATTTTATGGTGATTTTGATGGGAGTTTCCACAAAAGCTTGGATTTGGAAGTAGACCTCTCTGCTGCTTTGCTTGGCCGCCGTTCCCACAGGTGGTCAGCCTTTGTTGACGATGGGAAGATCAAGGCTTTCAATGTTGAGGTAGCTCCTTCTGACTTCAAGGTTTCTGGTGCCGAGGTGATCTTGGACCAAATCTGA</cdnaseq>

Protein Sequence

<aaseq>MASSLLRKSTVVGSPTSPSAMVGFQGARVGGLRLRHRLGGARRVAAEGPLLGRGRRHQLLHHPSQGHLPWEESGHLRPASNRVLHLIKQSSEGNMVXGCNSKNKKGAYTGVCSQAHVPSYKNNIDKLKAKGVDSVICVSVNDPYALNGWAEKLQAKDAGKKVVIFGLPGAYTGVCSQAHVPSYKNNIDKLKAKGVDSVICVSVNDPYALNGWAEKLQAKDAIEFYGDFDGSFHKSLDLEVDLSAALLGRRSHRWSAFVDDGKIKAFNVEVAPSDFKVSGAEVILDQI</aaseq>

Gene Sequence

<dnaseqindica>1..208#311..340#758..834#1089..1247#2012..2041#2768..2926#3489..3583#4515..4620#ATGGCGTCGTCTCTTCTGAGGAAGTCGACGGTAGTCGGCTCCCCGACGTCGCCGTCGGCGATGGTGGGCTTCCAGGGGGCTCGCGTCGGTGGGCTCCGGCTCCGACATCGTCTCGGCGGCGCCCGGCGTGTCGCTGCAGAAGGCCCGCTCCTGGGACGAGGGCGTCGCCACCAACTTCTCCACCACCCCTCTCAAGGACATCTTCCATGTACGCCCCCGCCGCCGCCGCCGCCGCTAGCCCTACACTACCCACGTTCGTCTGCTCTGCTGGTCAGCCAGGCTTTTCTGATGATCCCTCGTGTTTTTGCAGGGGAAGAAAGTGGTCATCTTCGGCCTGCCTGTAAGCTCTCCCCTCCTCTCTTCCTCCCGAAATTCATGCGTACTCTATACATTTCGGATACCAGATGAGGACCTTCGGTTTGTTGCTTTTTGTGTGGATACACTCATCCTGAATGCGCATTGGGGATTATGGATTCGTCTTCCTGTAGCCTCTGTCATTACAGTGACATACATTAGCCATGGGCCATGGCGAAGAGGTAGTTTGGGCATCGATTACTTCAACTTTCAAGATAAATTCCAACATTTGAAGTTAAGGAGTAGGAAATGCCAGACTTGAGAGTAGTTCTTTTGCGGATTAGGAGTGCAGAAATTAGAAAGCCTGGTATTCGTGGTGCCCACAGGTGAAATGGTAATAGAACTCTCTTGTTCGTGTAATAGAACTCTCCATTTCTTCGATTCTTCTCTATTCTCTGAACAGCAAACAGGGTGCTGCATCTAATCAAACAATCTAGTGAGGGTAATATGGTTNGGGGTTGCAATAGTAAAAACAAAAAGGTAAAAATTTCATGTTACTTATCCACACAATTCTGCTTTCAGAGCCAGCCAGTAAGGCATTTCTATCAAAATTCCTAGTTGATTTCTAACTGTCTTTTAGTATTTATGAAGCTTTATATGTTTGATATCATTTGTTTATTGTCTAAATTTTTTCATCGTTTATTCCAAATTCTTATATCCTGGAGCGATTCTCTTTCTGAATGATCTACTGATCTGATAATATAGGTGACTGTTATCTTTACCACATATTTCAGGGTGCATACACAGGAGTCTGTTCACAGGCACACGTCCCTAGTTATAAAAATAACATTGACAAGTTGAAAGCAAAAGGGGTTGACTCTGTTATCTGTGTCTCTGTGAATGACCCTTATGCCCTGAATGGATGGGCAGAAAAGCTACAGGCAAAAGATGCTGTGAGTTACCATTCTATATGCTTAAATAGTAAGAAATGCATTAAACACGCTGTATGTTTTGCTAATCTAATTATATTTACTAATTATGCATGGTATATTAATATCCACCTTTGTGTTTGGTGGACTTTATCCATAATACAAATGCTGAATGCTATTGTATTCTCTCCCTGCCTCAGTACTTTGTAATGATTGAAAGCTGCACATGTCTGCCAGTAATGTGCTTATTTCATCATATAACCTGTAAAACAGTAAATTGCAAAGCTAATTTCATGTATCTCCTCAAGTTCACCTAAATTTATTTATGTTTTTCTTCTGATTTGTTTAATGTACACTTTAATGTAAGAAGAAACATAAACATTCTTCAAGTATATAATAGTTATATATTCTATACTTTAAAAATAATAAGGACCAGCGTATCATAGTCTCGTACCATTGTAGATGGCTATTGTATATGAATGTTTGTCCCATGAGTCCATGCAGATATAGTTCATATCAAATTTGCTCACAATCACATAATATTCAAATCTAACCATCTGCTATGATTTTGTAATATTGATACCAGATTGAATTTTATGGTGATTTTGATGGGAGTTTCCACAAAAGCTTGGATTCGGAAGTAGACCTCTCTGCTGCTTTGCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTAGCCCTACACTACCCACGTTCGTCTGCTCTGCTGCTCAGCCAGGCTTTTCTGATGATCCCTCGTGTTTTTGCAGGGGAAGAAAGTGGTCATCTTCGGCCTGCCTGTAAGCTCTCCCCTCCTCTCTTCCTCCCGAAATTCATGCGTACTCTATACATTTCGGATACCAGATGAGGACCTTCGGTTTGTTGCTTTTTGTGTGGATACACTCATCCTGAATGCGCATTGGGGATTATGGATTCGTCTTCCTGTAGCCTCTGTCATTACAGTGACATACATTAGCCATGGGCCATGGCGAAGAGGTAGTTTGGGCATCGATTACTTCAACTTTCAAGATAAATTCCAACATTTGAAGTTAAGGAGTAGGAAATGCCAGACTTGAGAGTAGTTCTTTTGCGGATTAGGAGTGCAGAAATTAGAAAGCCTGGTATTCGTGGTGCCCACAGGTGAAATGGTAATAGAACTCTCCATTTCTTCGATTCTTCTCTATTCTCTGAACAGCAAACAGGGTGCTGCATCTAATCAAACAATCTAGTGAGGGTAATATGGTTTGGGGTTGCAATAGTAAAAACAAAAAGGTAAAAATTTCATGTTACTTATCCACACAATTCTGCTTTCAGAGCCAGCCAATAAGGCATTTCTATCAAAATTCCTAGTTGATTTCTAACTGTCTTTTAGTATTTATGAAGCTTTATATGTTTGATATCATTTGTTTATTGTCTAAATTTTTTCATCGTTTATTCCAAATTCTTATATCCTGGAGCGATTCTCTTTCTGAATGATCTACTGATCTGATAATATAGGTGACTGTTATCTTTACCACATATTTCAGGGTGCATACACAGGAGTCTGTTCACAGGCACACGTCCCTAGTTATAAAAATAACATTGACAAGTTGAAAGCAAAAGGGGTTGACTCTGTTATCTGTGTCTCTGTGAATGACCCTTATGCCCTGAATGGATGGGCAGAAAAGCTACAGGCAAAAGATGCTGTGAGTTACCATTCTATATGCTTAAATAGTAAGAAATGCATTAAACACGCTGTATGTTTTGCTAATCTAATTATATTTACTAATCATGCATGGTATATTAATATCCACCTTTGTGTTTGGTGGACTTTATCCATAATACAAATGCTGAATGCTATTGTATTCTCTCCCTGCCTCAGTACTTTGTAATGATTGAAAGCTGCACATGTCTGCCAGTAATGTGCTTATTTCATCATATAACCTGTAAAACAGTAAATTGCAAAGCTAATTTCATGTATCTCCTCAAGTTCACCTAAATTTATTTATGTTTTTCTTCTGATTTGTTTAATGTACACTTTAATGTAAGAAGAAACATAAACATTCTTCAAGTATATAATAGTTATATATTCTATACTTTAAAAATAATAAGGACCAGCGTATCATAGTCTCGTACCATTGTAGATGGCTATTGTTTATGAATGTTTGTCCCATGAGTCCATGCAGATATAGTTCATATCAAACTTGCTCACAATCACATAATATTCAAATCTAACCATCTGCTATGATTTTGTAATATTGATACCAGATTGAATTTTATGGTGATTTTGATGGGAGTTTCCACAAAAGCTTGGATTTGGAAGTAGACCTCTCTGCTGCTTTGCTTGGCCGCCGTTCCCACAGGTCAATGAATTTTACTTTGGTTAACTTGGTTTATGTCCTTAAAAAGTTAAAACTGCTGCCTGTTTTATATAATTACAATTGAACATAAAACAACGTATTTCAGTTGCCTTTTGCTTTATTTGTTTAATTAAATCATTGTGTTAAACTTATTACTTACCATGGGTTAACTCAAGTACTCCTTTTCCTTACTGTAGCTTTACCCTTCAAAGTGCATTGCATTCATTATCATATTTGAGCATGTTTTATGTTGTCAAGGACATTCTGCATTGGCGGCATTGCTAATCTACACATGTTCCCTACTGTTAAACTGTCATGATTCATGACTGTAAATGATCAATTACTTCAAGCTGCATGCACATGCCTATACATGATTTAAGTGTGAGTCTTATTCAGTCGATTTCCAATGGATTTTGCTGTTGTTGTGACAAAATTTACTGCACTGAGGCTAACCTCTCAAAAGACTCCAATAAATGAATCCAAACCACTTCCTAAGTGTCGCACTTTAGCATGCCCTTGTTAGCTGCACAACTATCTATGGGTGCATTGAAATTTCAAACAAAAGAGCTGAGGTGCATATTTGGAACATAATTATGGTTCACCAGGTGCATGTATTGCATGTTTTTTTGTGAAGGAATATGTAGTTGCGTGATTCCGCAAAGTTGAACATCATTCAACATTGAGTCACTTTTGAACCTCCTTGTGTGCCCCCTTTCATTTGTTGTAAATAGTACTCTGGTGACACAATGTATGCATTTGGCTAAGCCTGAAATGCCATTCCATAATCTCCATGGACAGCTCATGCTGTGGTACACTTTTTTTTTTTTTGAGGATGTAATTTACATGTTTTGTCATTTAAGAGATTGTGAAATGTGACTGGTTAATGGATAGATTTTTCTTACTTCTCTTCTAAAAGTATTGCTGTCCGTTTTAGGTGGTCAGCCTTTGTTGACGATGGGAAGATCAAGGCTTTCAATGTTGAGGTAGCTCCTTCTGACTTCAAGGTTTCTGGTGCCGAGGTGATCTTGGACCAAATCTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA001930

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA001930&oldid=39654"