BGIOSGA001948

From RiceWiki
Revision as of 10:29, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA001948| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA001948, complete gene.| tag = P0453A0...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA001948

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA001948, complete gene.

LocusTag

P0453A06.3

Ensembl Transcript ID

BGIOSGA001948-TA

Ensembl Protein ID

BGIOSGA001948-PA

Length

1791

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:9737564..9739354

Sequence Coding Region

9739091..9739354,9738771..9738962),complement(9738356..9738521,9737564..9737985

Genome Context

<gbrowseImage1> name=IndicaChromosome01:9737564..9739354 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:9737564..9739354 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCTTCATCCAAGACTGTTCTTTCTGCAATTTTCACTGCTTCTCTGTGCTTCACTGTAGCTCTTGCTTTCCCTGCTCACCATGAGGATCTTCACCCAGTTGTGCAGAGCCCACCAAAGCCAGTTCTTTCTCCAGATTACTATAAGGCTACATGCCCACAAGCTGATGAGATTGTGGTCTCTGTCCTAAAGAAGGCTATTGCCAAGGAGCAGAGGATTGCTGCTTCTCTTCTCAGGCTCCTGTTCCATGACTGCTTTGTTCAGGGATGCGACGCGTCGGTTTTGTTGGATGACAGTGAAGAATTCGTGAGCGAGAAAAAGGCTATTCCTAACAAAAATTCTATTAGAGGATTTGAAGTTATAGACGAGATCAAGGCTGCACTTGAAGAAGCTTGTCCACACACAGTCTCTTGTGCTGACACCATTGCCCTAGCTGCGAGAGGTTCAACAGTTCTGAGCGGTGGCCCATACTGGGAACTTCCACTAGGAAGGAAGGATTCAAAGGCAGCATATATGAAATTAGCAAACAAGAACCTTCCTCCACCAAATGCGACACTGCATCGTCTTGTGAAATTCTTTGAAAGGCAAGGACTGGATAAGGTGGACCTTGTGGCACTGTCAGGAAGCCACACCATTGGAATGGCCAGATGTGTGAGCTTCAAGCAGAGGCTCTACAACCAGCACAGAGACAACCAGCCTGACAAAACGCTAGAGAGAATGTTCTACTCCACACTGGCCTCAACATGCCCACGCAACGGCGGTGACAACAACTTACGCCCACTGGAGTTTGCTACCCCTTCGAAATTCGACAACACCTATTACAAGCTGCTGATCGAGGGAAGAGGGCTCCTCAATTCAGATGAAGTTCTGTGGACAGGACGAGACCCGCAGATCGCGGGTCTCGTCAGAAGCTATGCAGAAAACGAACCGCTGTTCTTCGAGCACTACGTGAACTCGATAACCAAGATGGGGAACATCAATCCCCTCACTGGTTACGACGGAGAAATCCGCAAGAACTGCCGTGTGGTTAACAAGAAGATCTAG</cdnaseq>

Protein Sequence

<aaseq>MASSKTVLSAIFTASLCFTVALAFPAHHEDLHPVVQSPPKPVLSPDYYKATCPQADEIVVSVLKKAIAKEQRIAASLLRLLFHDCFVQGCDASVLLDDSEEFVSEKKAIPNKNSIRGFEVIDEIKAALEEACPHTVSCADTIALAARGSTVLSGGPYWELPLGRKDSKAAYMKLANKNLPPPNATLHRLVKFFERQGLDKVDLVALSGSHTIGMARCVSFKQRLYNQHRDNQPDKTLERMFYSTLASTCPRNGGDNNLRPLEFATPSKFDNTYYKLLIEGRGLLNSDEVLWTGRDPQIAGLVRSYAENEPLFFEHYVNSITKMGNINPLTGYDGEIRKNCRVVNKKI</aaseq>

Gene Sequence

<dnaseqindica>1..264#393..584#834..999#1370..1791#ATGGCTTCATCCAAGACTGTTCTTTCTGCAATTTTCACTGCTTCTCTGTGCTTCACTGTAGCTCTTGCTTTCCCTGCTCACCATGAGGATCTTCACCCAGTTGTGCAGAGCCCACCAAAGCCAGTTCTTTCTCCAGATTACTATAAGGCTACATGCCCACAAGCTGATGAGATTGTGGTCTCTGTCCTAAAGAAGGCTATTGCCAAGGAGCAGAGGATTGCTGCTTCTCTTCTCAGGCTCCTGTTCCATGACTGCTTTGTTCAGGTTAGCACATTTTCAAGTGTCCTCCTTGTTCTAAAAGAACACAAAATTTCTAGAAGGAAACACAATTTTCAGTGTTCACTCATTGATATAAATGAGAAGTGGTTTTGATCGTCTCGATGAAATTTCAGGGATGCGACGCGTCGGTTTTGTTGGATGACAGTGAAGAATTCGTGAGCGAGAAAAAGGCTATTCCTAACAAAAATTCTATTAGAGGATTTGAAGTTATAGACGAGATCAAGGCTGCACTTGAAGAAGCTTGTCCACACACAGTCTCTTGTGCTGACACCATTGCCCTAGCTGCGAGAGGTTCAACAGTTCTGGTAAACATCTCTGCTCTTAAAATTAAAAAAAAAAACTTCATTCATCTGTTTAAAATATAGACTTCATTCTTTTTCAAGAGAACACAATAAGAGAATTTCTGAAAGCAACTACAATACTTTGGTTCATCTTGTTTGGATGTAGATGTATATATAACACTGGCATTTCAAGTAAAAATAATGTTTCTAACCTCAGTTTAAAATTATCTACCACAAGCATGATGAAATTTAATGGTTTTTATCTCATGACAGAGCGGTGGCCCATACTGGGAACTTCCACTAGGAAGGAAGGATTCAAAGGCAGCATATATGAAATTAGCAAACAAGAACCTTCCTCCACCAAATGCGACACTGCATCGTCTTGTGAAATTCTTTGAAAGGCAAGGACTGGATAAGGTGGACCTTGTGGCACTGTCAGGTATTGAATTAATTCCACCTCTTCAGTGTTGAAACTAGATTTTTTTTGAGGTAATGTAGTAAAAAAAAATCCGGCGGAATAAAATAGATTTGTTTGTACATGTTCTCCACATCAGTTTCTTGTCACATGTTTAATCTTTCAAAGTACTGCAAGAACCTAGAAAAGATGAGAAAAACACTGAAACAAAGCATAACTAGCAATGAAATTTGCCAGAAAATTAAGTGAACAACAAATATAAGGATAGTGTAGCTCTAGTCATACTGGGATAATTAAAATGCTAATCCAAACCATCCTCCTGCATTAACATAATTGAAACAACTAATAATATTTTTCTCACCAAACAAATACATACATTTTTCTGCATTGACAGGAAGCCACACCATTGGAATGGCCAGATGTGTGAGCTTCAAGCAGAGGCTCTACAACCAGCACAGAGACAACCAGCCTGACAAAACGCTAGAGAGAATGTTCTACTCCACACTGGCCTCAACATGCCCACGCAACGGCGGTGACAACAACTTACGCCCACTGGAGTTTGCTACCCCTTCGAAATTCGACAACACCTATTACAAGCTGCTGATCGAGGGAAGAGGGCTCCTCAATTCAGATGAAGTTCTGTGGACAGGACGAGACCCGCAGATCGCGGGTCTCGTCAGAAGCTATGCAGAAAACGAACCGCTGTTCTTCGAGCACTACGTGAACTCGATAACCAAGATGGGGAACATCAATCCCCTCACTGGTTACGACGGAGAAATCCGCAAGAACTGCCGTGTGGTTAACAAGAAGATCTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA001948