BGIOSGA001953

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Revision as of 10:29, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA001953| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA001953, complete gene.| tag = OS01G02...")
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Gene Name

BGIOSGA001953

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA001953, complete gene.

LocusTag

OS01G0260100

Ensembl Transcript ID

BGIOSGA001953-TA

Ensembl Protein ID

BGIOSGA001953-PA

Length

4575

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:9589282..9593856

Sequence Coding Region

9593661..9593856,9593498..9593581),complement(9593215..9593379,9592990..9593096),complement(9592678..9592856
,9591549..9591710),complement(9591112..9591327,9590968..9591005),complement(9590727..9590854
,9589282..9590388

Genome Context

<gbrowseImage1> name=IndicaChromosome01:9589282..9593856 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:9589282..9593856 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGCGGAATCTCCCAGATACACTGTCATCCCTCATGGGGTTCAACAAGCACCTCACGCCTAGTTGGATTGAATCAGTGTCTCACATCATTGATGGGTTGTCACCTACCAAGCCACAAATGAAAGTAATGGTTGAGAAGGATGAAAATATCAGTGATGACAATACAAAATCAGAGGCTAAAGTTCAAAAAATTCAAGATGAACTGGTTTCACTGAATGCTCAACTAAAGCAGATAACACTGCAGAGGAGAGAGGCACTAAATAACTACTTGGATTTGAAAGGAAATATAAGGGTGTTTTGCCGTATAAGGCCTTTTCATCATGAAGAAAGTTACAGTTCAAGAAATCTGTTCACTCTGGATGAGAGCAATGTTTTTCTGAAAGTTGCTGAAACCAAGAGAAAACAATACAAGTTTGATAAGGTTTTCGATCAATTCTCAACACAAGGTGATGTATTTTCCGAAGTTGAACCAGTGATAAAATCTGCTTTAGATGGCTACAATGTTTGCATATTTGCCTACGGTCAAACAGGTAGTGGAAAAACTTATACAATGGAAGGCAAGCCTACAAATTTGGGTGTCATACCACGTGGGATTCAAACACTGTTCAACCAAGCTTCAGAATGCAACAATAGGTTTCTGTTCACTTTCAGTATGCTTGAGATATATATGGGGAACATACGAGATCTACTAGCCCCAAGAAGCAAGACTAACGGGATTAAGAATGTACCAAGCCTCTCCATTAAATCAGACCCTGATGGTGGCATTGAGATTGAAGATCTGGTAGCAGTTACTGTGAATAGTTTTCAAGAAGTGAAAAGATTGTATGAAATGGGGACCCGTCTTAGATCAACAGCTTCCACTATGGCAAATTCTACTTCAAGCAGATCTCACTGTTTGATTCGCATCTCATTGACTTCCTTGAATGCAACTGAGAGAAGAAAAGCAACAAGTAAATTGTGGATGATTGATCTAGGTGGGAGTGAAAGACTTGTAAAGACAAAAGCAACTGGGAAAAGGCTCAAGGAAGGGAAAGCCATAAATTTGTCGTTGTCAGCCCTAGGCGATGTGATTGACGCACTACAGACTAAAAAACCCCATGTCCCTTACAGAAATAGTAAGCTTACACAAGTACTGAGAGATTCTCTAGGATGTGAATCCAAAACATTGATGCTTGTCCATATCAGCCCAGATGAGGGTGATTTGTGTGAGACAATTTGCACCTTGGGTTTTGCAACAAGAGTGAGAAGTATTCGCCTGGAAAGTGAAGAACCACCAGAGATGAAAGCAAGGAAGGAAACATTATTAATAGATTTAGGACAGAAGGTCAATGATTTGGAACATGAATGTGAAGATATTAGAAGAAAAATTAAGAATCTCGAGGAGAGTATGGAGCATTTGGCAGGACCTCAGCCAACTATTTACTCTAATTTTGACATGTCACATCTATCCAGTGAAGAACTGAAAACAGATGTATCAAGTAATGTGAGGAATTCAAAGAATCGCAGAGAAGCCTCTTCCAGGTTACCAAGGTTCATGAAGCCAACTGCTTCTAGCCAGCACAGGATAGGCTTAAATAATCGCACTCCCATTATTAACAGGCTAAAACCACCAGTACCACCAAGGAGGCGGCCTTCCTCAGTTTATGCTGAGTCTGTAATGGTCCCAGTAAATGCTGCCCCTTGGCAATCAGAATGCAGCTCCGAATGCAGTATGTCCTTAACAAGTGACATGAATTGGACACCAAGCATACGAGATGGAACTGAATGTAGCCAGGATGCATCAGAATACGAGATTAAACAGGTGATTTTCTCAGAACATGAGAAATCATCGCATGATCAAGTGACCTGCTACACAGATTATCCACTTGCGGAATCTAGAGATATACAGATTAAAATCGAAGAGAAGGGAATTGTAGACATTGACAATTGGCTCCACCAACAAATCGTTGAGAAGACTAGCACATTTCGAAGCAAAATGGTGCTTGATATTCCCGGAGTAACTGAAGCTGAAATCCATGTTTCTAGTATTCCTTCACCAACTACTATGGCATGCACTAAAGAAGATAGCCAGGTAAAGGATGAAGTAATGGGCCTAACCCTTCAATCCTCAACAGACTATGTCGAGGATATAAAGCAAAGCAAGACTGATAATCAATTCACAGCAAAAGAATTATGCACTCCACCATTTAAAGAATTTAGCAGCAACAATGAAGTGAAGGGACATAAAAACGAACATCCTGTGTACCATGGGAGACCCAGAAGGTCACTACAGGAAGAACTGGAAAATTGCACGCTAGAGAAGCCAAACATGGACTCAAAATCTCACAGGTCACATGATGATAAACACAAAACAGGTAATGTTCTGTCTTACACCGGAGAATGA</cdnaseq>

Protein Sequence

<aaseq>MRNLPDTLSSLMGFNKHLTPSWIESVSHIIDGLSPTKPQMKVMVEKDENISDDNTKSEAKVQKIQDELVSLNAQLKQITLQRREALNNYLDLKGNIRVFCRIRPFHHEESYSSRNLFTLDESNVFLKVAETKRKQYKFDKVFDQFSTQGDVFSEVEPVIKSALDGYNVCIFAYGQTGSGKTYTMEGKPTNLGVIPRGIQTLFNQASECNNRFLFTFSMLEIYMGNIRDLLAPRSKTNGIKNVPSLSIKSDPDGGIEIEDLVAVTVNSFQEVKRLYEMGTRLRSTASTMANSTSSRSHCLIRISLTSLNATERRKATSKLWMIDLGGSERLVKTKATGKRLKEGKAINLSLSALGDVIDALQTKKPHVPYRNSKLTQVLRDSLGCESKTLMLVHISPDEGDLCETICTLGFATRVRSIRLESEEPPEMKARKETLLIDLGQKVNDLEHECEDIRRKIKNLEESMEHLAGPQPTIYSNFDMSHLSSEELKTDVSSNVRNSKNRREASSRLPRFMKPTASSQHRIGLNNRTPIINRLKPPVPPRRRPSSVYAESVMVPVNAAPWQSECSSECSMSLTSDMNWTPSIRDGTECSQDASEYEIKQVIFSEHEKSSHDQVTCYTDYPLAESRDIQIKIEEKGIVDIDNWLHQQIVEKTSTFRSKMVLDIPGVTEAEIHVSSIPSPTTMACTKEDSQVKDEVMGLTLQSSTDYVEDIKQSKTDNQFTAKELCTPPFKEFSSNNEVKGHKNEHPVYHGRPRRSLQEELENCTLEKPNMDSKSHRSHDDKHKTGNVLSYTGE</aaseq>

Gene Sequence

<dnaseqindica>1..196#276..359#478..642#761..867#1001..1179#2147..2308#2530..2745#2852..2889#3003..3130#3469..4575#ATGCGGAATCTCCCAGATACACTGTCATCCCTCATGGGGTTCAACAAGCACCTCACGCCTAGTTGGATTGAATCAGTGTCTCACATCATTGATGGGTTGTCACCTACCAAGCCACAAATGAAAGTAATGGTTGAGAAGGATGAAAATATCAGTGATGACAATACAAAATCAGAGGCTAAAGTTCAAAAAATTCAAGGTATGCACTTCTAATCTTGCCCTCAAAAGCTCTAAGCGCTTCTGGGAATTTCTCAACTTTTGTTTGCTTATTACTACAGATGAACTGGTTTCACTGAATGCTCAACTAAAGCAGATAACACTGCAGAGGAGAGAGGCACTAAATAACTACTTGGATTTGAAAGGTTTGAGCTTTGTTCCTGAATTTTCTGTCTGCGAAAATTCGTTTATCTTTGGTTTTGTAAGCTTCAACAAAGACAACAGATGCCACTACATGTTGATTGACATGTCTTTATCCCACAGGAAATATAAGGGTGTTTTGCCGTATAAGGCCTTTTCATCATGAAGAAAGTTACAGTTCAAGAAATCTGTTCACTCTGGATGAGAGCAATGTTTTTCTGAAAGTTGCTGAAACCAAGAGAAAACAATACAAGTTTGATAAGGTTTTCGATCAATTCTCAACACAAGGTATTGAATCATACCAATACTTAATAAAAGTGGAACAAATTATTTGAATGCATATCAAGTTACAATGGTATTTTCCGAAGTTGGACCAGTGAACAAATTATTTGGTATGTTTTTCCAGGTGATGTATTTTCCGAAGTTGAACCAGTGATAAAATCTGCTTTAGATGGCTACAATGTTTGCATATTTGCCTACGGTCAAACAGGTAGTGGAAAAACTTATACAATGGTAAGATTTTCCCTATTGATCACTTTTATTCCCATCATCCCCTCCATGCACAAAAGGATAAATGAAAAGTATAAACACACCAAACCGACTGAATTCAAATGTTTTACTTACAGTCCATTACCATATGAATTAGGAAGGCAAGCCTACAAATTTGGGTGTCATACCACGTGGGATTCAAACACTGTTCAACCAAGCTTCAGAATGCAACAATAGGTTTCTGTTCACTTTCAGTATGCTTGAGATATATATGGGGAACATACGAGATCTACTAGCCCCAAGAAGCAAGACTAACGGGATTAAGAATGTACCAAGGTAATTTTCTAAATTTGTTCAGAGAAAAATACTTTTTGCAAAACAAATAATGATAAAGATAGAAAAAGAAAAGGAAATTAAAGTATCTCAGGTATGTCAGTTCTGAATAAAATGAAAATTGGAGCCAGTTCCTGACTATGATGCAGTCATGCAGCCACAGCAATGAACCACGAACAAGTGTCAATTACGTGTCTCTTGAAAAATGTTGAATCCCAAGACACTAAAAATGTATTCCGGATATGGTCCAATATAGTTCATGAATGAGCTAACAAACAAGATTCTAATATAGTTTGATGCATTATTTGACTTAGTTGTGCTCTTGTTTTACACCTAATGTTACCAAAGCTTGTACTATTAACTTGACAATATTTTGCAATTTCGGATTTCCTTGTGCCTGCCATTGATATGACTTATGAGGCTGTCAGGGTCACTGTTCATATGTAAGCAGGGTATGCCACAATGTTCATATGCAAGCATCCATTCCTAATTACAAAGAGGAAAAGGAGGAAAAAGAAAAAGGTGTACCATATTATTGACTTCAAGTAACAGGGTTTCCTGTACTTCATCAGGATATATCTCATAAGTCATATCAGCTGAAAATGTTGAAAATAATAGTTTTTTCCTGTAAATATGGATAGTCTGGGAAAATGCCACAATCATGCAGTATAATTTTTGTCCCTATACTGCATATAGGTGTGACACAAACAACAAACGAAATGAATATGGTCTATCATTTTGTAGAACCCAATATTGAAGGTTTACCCCTTTCAAGGATCTAAATTAAAAGATAGCCCTTTAATCTCAAAAAAAGGGAAAGAAGATCCTGCAATCATTAACTTGTGAATTGCTTGTGTTGTCCCTGAACTTTAGGATAATACAGGTTTAATTCGCTTTTATATATCTGTGCACATTTATAAACTTTGCATTTATTGAATTAAACTATTATTTATTGTTTATGTGCATCCAGCCTCTCCATTAAATCAGACCCTGATGGTGGCATTGAGATTGAAGATCTGGTAGCAGTTACTGTGAATAGTTTTCAAGAAGTGAAAAGATTGTATGAAATGGGGACCCGTCTTAGATCAACAGCTTCCACTATGGCAAATTCTACTTCAAGCAGATCTCACTGGTAAATTTTTATTTTATTGAAGAAAAGATTTCTTATATATATCTATACAATTAGAATATCAACTATGATTGCACCTGACTGAAAGAGGATTCAATCAAAAGTTAGAGAGCAAATGTTCACAGAAACATCTTGAGTGAATAAAATGGTTGTTTTTAAATTGAGAACCATGGAATAATCACTTTCCTGAAACTCTGTACTTTATTTGTTCATTTATGCAACAGTTTGATTCGCATCTCATTGACTTCCTTGAATGCAACTGAGAGAAGAAAAGCAACAAGTAAATTGTGGATGATTGATCTAGGTGGGAGTGAAAGACTTGTAAAGACAAAAGCAACTGGGAAAAGGCTCAAGGAAGGGAAAGCCATAAATTTGTCGTTGTCAGCCCTAGGCGATGTGATTGACGCACTACAGACTAAAAAACCCCATGTCCCTTACAGGTAAATGAAACTCATAATGCACAAGTGTATGGAAATTGGTACATGGCTGCCATTTCATCAGAAAAATATGACAAAACACTAACATGTCGCCCTTCCAAATTTGCAGAAATAGTAAGCTTACACAAGTACTGAGAGATTCTCTAGGTAAAGTAGTTCATCAGTAACTATTTCAAAAGGGATAACAACATATGTAGTTGAATTATTTTACACATATTTTTACAGCTTACCTTGACATATTCATGTTTAATTGTTGACAGGATGTGAATCCAAAACATTGATGCTTGTCCATATCAGCCCAGATGAGGGTGATTTGTGTGAGACAATTTGCACCTTGGGTTTTGCAACAAGAGTGAGAAGTATTCGCCTGGAAAGTGAAGAACCACCAGTAAGATTTTGCTCTTACCATTATGATGAGTGTATATGCAATAACTACCAGATGGCTATTTTATTCATTTATTCATTAAAAATAGCATAAACCAAACATTAATTAAGGTAATAAGACAGTTATGCTCTCACATTTCAATTTGCAAAGGGACAACTTCAAAAACAAGATCATTTTTATGAAAAAGTTGAGCTCTGTGTGATCAGCCAAAATTAAAGAATGCTCGGTTTGTATTTTTACAAAACATGATATTTGCATTCATGCACACATAAAAATAAACTTTTATGTGAATTTTTATTAAGTCGACTAATGACTACACAACATGTTTTGATCTCAAACAGGAGATGAAAGCAAGGAAGGAAACATTATTAATAGATTTAGGACAGAAGGTCAATGATTTGGAACATGAATGTGAAGATATTAGAAGAAAAATTAAGAATCTCGAGGAGAGTATGGAGCATTTGGCAGGACCTCAGCCAACTATTTACTCTAATTTTGACATGTCACATCTATCCAGTGAAGAACTGAAAACAGATGTATCAAGTAATGTGAGGAATTCAAAGAATCGCAGAGAAGCCTCTTCCAGGTTACCAAGGTTCATGAAGCCAACTGCTTCTAGCCAGCACAGGATAGGCTTAAATAATCGCACTCCCATTATTAACAGGCTAAAACCACCAGTACCACCAAGGAGGCGGCCTTCCTCAGTTTATGCTGAGTCTGTAATGGTCCCAGTAAATGCTGCCCCTTGGCAATCAGAATGCAGCTCCGAATGCAGTATGTCCTTAACAAGTGACATGAATTGGACACCAAGCATACGAGATGGAACTGAATGTAGCCAGGATGCATCAGAATACGAGATTAAACAGGTGATTTTCTCAGAACATGAGAAATCATCGCATGATCAAGTGACCTGCTACACAGATTATCCACTTGCGGAATCTAGAGATATACAGATTAAAATCGAAGAGAAGGGAATTGTAGACATTGACAATTGGCTCCACCAACAAATCGTTGAGAAGACTAGCACATTTCGAAGCAAAATGGTGCTTGATATTCCCGGAGTAACTGAAGCTGAAATCCATGTTTCTAGTATTCCTTCACCAACTACTATGGCATGCACTAAAGAAGATAGCCAGGTAAAGGATGAAGTAATGGGCCTAACCCTTCAATCCTCAACAGACTATGTCGAGGATATAAAGCAAAGCAAGACTGATAATCAATTCACAGCAAAAGAATTATGCACTCCACCATTTAAAGAATTTAGCAGCAACAATGAAGTGAAGGGACATAAAAACGAACATCCTGTGTACCATGGGAGACCCAGAAGGTCACTACAGGAAGAACTGGAAAATTGCACGCTAGAGAAGCCAAACATGGACTCAAAATCTCACAGGTCACATGATGATAAACACAAAACAGGTAATGTTCTGTCTTACACCGGAGAATGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA001953

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA001953&oldid=39677"