BGIOSGA002018

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Revision as of 10:30, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA002018| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA002018, complete gene.| tag = OS01G02...")
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Gene Name

BGIOSGA002018

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA002018, complete gene.

LocusTag

OS01G0243900

Ensembl Transcript ID

BGIOSGA002018-TA

Ensembl Protein ID

BGIOSGA002018-PA

Length

3314

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:8596745..8600058

Sequence Coding Region

8598792..8600058,8597059..8597174),complement(8596745..8596870

Genome Context

<gbrowseImage1> name=IndicaChromosome01:8596745..8600058 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:8596745..8600058 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGTCGTCACCACCGCCGGCCACGCTGTCCACCGCCGCCGCCGACGTGTCCCATCCCGCGCCCGACGCGCCGGCGGGCTCCACCGTCCTCGCCGCGCCGCCGTGCGTCTCCCTCGACCCCGCCGCGCCGGCGCACCAGCAGCCCGCCGACACGGTGTCCGCGCCGCCGCCGCCGTCGTCGACGTGGGTCATCCTGGGCAGCATCCCTCGCGTGAGCGCCGCCGCGGATGGCGAGCTCCCCGTGGACGCCGACCTCTCCGTCGCGCTCGCGGCGCCCCCGCGCGTCGCGATCCTCACCATCTCCCCGGACGTGTTCCCGGAGCCCCCCACGCCCCGCTTCTTCCCGTTCGTCCTCGCCGCCGACACCTCGGGCCTCCTCCTCCTCCAGGCGAACCTGGGCATCCCCATGAGCCGCGAGGTCGTCGACCGCCCGCACCGCCAGGGTCTGAGGTGGCGCGACGCCGCCTCGCGCTACTTCGTCCTCAACGCCACCACCGCCTCGGCGTTCCACCTCCCGGACCCCGAGGAACCCATCCTGCACCAGGCCCTCCTCGGCCTAATCGCCTCACCTCGCGGCGATGGCCACTACATGGTCGCCGAGCTCCAGCCCCTCATCGGCTGCGACAAGGCCACCCTCCTCTGCTTCTCGTCCGAGGTTGGGGAATGGGTCGAGAAGAGCGTCCGTTACCCGCTCCCGCCCCGTCCGTTGGCTCCCATCTGCGTGTTCTCGCATCACGGGAGGCTCTGGTGGGTCGATCTCACCTGGGGCGTCATGACCAGCGACCCCTTCGCCGACGAGCCGGTGCTGGGCTTCATCCCGTTCCCGGCGGGCAAGGTGTTGCAGTGCAGGGAAGCTTGGGGAGTGGCCGACAAGTACCGCTACGTGGGCGTCAGCGCCGGCAAGCTGCGGTTCGTGGACACGTACACCGCTCCTCGCCGCGGCGTTCCTCCGAAGGTCAGCGTGTGGACGCTGGCAGATCCGGACTCCACGGAGTGGACGCTCGAGCACGAGGCGAGGTTCGACGACATCTGGGCCGACGAGAGCTACAAGGCGACTGGTCTGTCGAAGAAGATCCCCGTGCTCGCGCTCATCCACCCGGAGAACCCCAACGTCGTGTACTTCTTCCTGGAGGAGCACCTGTTCGGTGTCGACGTGCGCGACCGCAAGGTTGTGGAGTGCGAGGCCTACGAGCTGGTTGCGCCGCCGAGCTGCTTCATCGCCAACCGCTTCACTCGCGCTTGGACTCTACCACGGGCGCTCTCCTCAGGGATCTCCAATTGGTCTAATGCCATCAACCTGGCTGAAAAGGCTAAATCCCGACCATCCCGGCGAGCTGCTAAGAAAAGTAGCAGGATGATGGGATCGCCTGGAGATTATCACTTGGTTGTTAGTAATGAACTTAACTACTTAAGTTATGGAGTGGGCGTGGGACACTGGGAAATGACAAGTACTCTCATGCTGGCATGTTTTTGGCTATCGCGGTGTACGGTGTGCCTCATGCAACAGTAA</cdnaseq>

Protein Sequence

<aaseq>MSSPPPATLSTAAADVSHPAPDAPAGSTVLAAPPCVSLDPAAPAHQQPADTVSAPPPPSSTWVILGSIPRVSAAADGELPVDADLSVALAAPPRVAILTISPDVFPEPPTPRFFPFVLAADTSGLLLLQANLGIPMSREVVDRPHRQGLRWRDAASRYFVLNATTASAFHLPDPEEPILHQALLGLIASPRGDGHYMVAELQPLIGCDKATLLCFSSEVGEWVEKSVRYPLPPRPLAPICVFSHHGRLWWVDLTWGVMTSDPFADEPVLGFIPFPAGKVLQCREAWGVADKYRYVGVSAGKLRFVDTYTAPRRGVPPKVSVWTLADPDSTEWTLEHEARFDDIWADESYKATGLSKKIPVLALIHPENPNVVYFFLEEHLFGVDVRDRKVVECEAYELVAPPSCFIANRFTRAWTLPRALSSGISNWSNAINLAEKAKSRPSRRAAKKSSRMMGSPGDYHLVVSNELNYLSYGVGVGHWEMTSTLMLACFWLSRCTVCLMQQ</aaseq>

Gene Sequence

<dnaseqindica>1..1267#2885..3000#3189..3314#ATGTCGTCACCACCGCCGGCCACGCTGTCCACCGCCGCCGCCGACGTGTCCCATCCCGCGCCCGACGCGCCGGCGGGCTCCACCGTCCTCGCCGCGCCGCCGTGCGTCTCCCTCGACCCCGCCGCGCCGGCGCACCAGCAGCCCGCCGACACGGTGTCCGCGCCGCCGCCGCCGTCGTCGACGTGGGTCATCCTGGGCAGCATCCCTCGCGTGAGCGCCGCCGCGGATGGCGAGCTCCCCGTGGACGCCGACCTCTCCGTCGCGCTCGCGGCGCCCCCGCGCGTCGCGATCCTCACCATCTCCCCGGACGTGTTCCCGGAGCCCCCCACGCCCCGCTTCTTCCCGTTCGTCCTCGCCGCCGACACCTCGGGCCTCCTCCTCCTCCAGGCGAACCTGGGCATCCCCATGAGCCGCGAGGTCGTCGACCGCCCGCACCGCCAGGGTCTGAGGTGGCGCGACGCCGCCTCGCGCTACTTCGTCCTCAACGCCACCACCGCCTCGGCGTTCCACCTCCCGGACCCCGAGGAACCCATCCTGCACCAGGCCCTCCTCGGCCTAATCGCCTCACCTCGCGGCGATGGCCACTACATGGTCGCCGAGCTCCAGCCCCTCATCGGCTGCGACAAGGCCACCCTCCTCTGCTTCTCGTCCGAGGTTGGGGAATGGGTCGAGAAGAGCGTCCGTTACCCGCTCCCGCCCCGTCCGTTGGCTCCCATCTGCGTGTTCTCGCATCACGGGAGGCTCTGGTGGGTCGATCTCACCTGGGGCGTCATGACCAGCGACCCCTTCGCCGACGAGCCGGTGCTGGGCTTCATCCCGTTCCCGGCGGGCAAGGTGTTGCAGTGCAGGGAAGCTTGGGGAGTGGCCGACAAGTACCGCTACGTGGGCGTCAGCGCCGGCAAGCTGCGGTTCGTGGACACGTACACCGCTCCTCGCCGCGGCGTTCCTCCGAAGGTCAGCGTGTGGACGCTGGCAGATCCGGACTCCACGGAGTGGACGCTCGAGCACGAGGCGAGGTTCGACGACATCTGGGCCGACGAGAGCTACAAGGCGACTGGTCTGTCGAAGAAGATCCCCGTGCTCGCGCTCATCCACCCGGAGAACCCCAACGTCGTGTACTTCTTCCTGGAGGAGCACCTGTTCGGTGTCGACGTGCGCGACCGCAAGGTTGTGGAGTGCGAGGCCTACGAGCTGGTTGCGCCGCCGAGCTGCTTCATCGCCAACCGCTTCACTCGCGCTTGGACTCTACCACGGGCGCTCTCCTCAGGTATTGCATCGTGCATCCCTGCATCGTCATTGTGTACTGTACTAATGTTCTGTTGCTCTGTTGCGATGTCTCTGCTCTGTATCGATTGTCTCTGCTTTATGTTCAGCAGTTCAAAGTTGGCCCTCTTCTACATAGAAGCTGTGTTGCATACTAATACTGTCCTTTCTTGCATGATCATGTAATTTCCCTTACATATGTAATATGTTATGTTTAGAATAGAAGCTAGGGCATATTTGAGAGTCTTTGGTCCATCATGAAGGGTGCCTCTGTGGTTCTATACAATTGAGCTTCAGTAGTTAACTATTTCAGTAGTAAGTGTAGTAAAAAAGCTTGTAACTTCCAACTAAAAAATGCTTTCAATTTGATTGCATCACAGATTATAAGCTTTTCAACTTGAACATTCAAAGTTTGAACATGATATTTCCAATTCTCTACATGATTATTAGTTTGAACATTCACTTAGTGAAAAAACTGTACTGGAAACTTCCAACCTTCCTTGTCGAATTAAAAATTTTCTACTGAAAGTTTCCGACTTTACCTTATTTAACAGTTTAACACTATCAAAAAGTTCCGCTCATTGCTTAACTCGTGAGTATTGAGGCCCATCACGTTGTTCAATTAGGATGTAGTTTGCTAACTCGTTCTTTTCACATATCCATGTTCATGCATATGCTTTGTTTCAAGAATATTGTTCATTTGTTCTTGTTGAGACTATGGCACTATGCTGGTTGATTGCGCCCGGATTTCGAAGAAATCTCCATGGTTCCCATGTGGCATTTCATGGTAGAATGGTAGACTGTTCCAGTTCAAAGAAACTTTTCTGGAAGACTAGTCAGTGTAAATTTATTTGTTAATTTGAGACAGTAGTGCAGCATATCATGCTAACGTAGCCTATTTGACTTTATTCATATGCATGTCTTCACATACATGTTATGTGGGATATATGCATGGCTAGTTGTTCAGCATTGGCTTTGCCTTAACCTACGTAGTTAGAGGTTCATGCAATTGATCAGGATGCTTCATGTTATAGATTTGTAAATTTTCTTTCTCCTTGTCCCTAACTAGGACATGGTCAGAGAGGATCTACAATAATATTTTGGAAAGGGCTACTGATCTTATCCACATTGCGATGGTTTCAATATATATGTAAATTGATATTATGTCTTGTACATGTGTATAAACTGATGCTAGGAGACTAGTATTCTTCAGTCGTATTTAGGACAGTGGAGTAGATATCTGTTGTTGGTGCTTTTGGAAATTTGAGTGTGTGAGACTATTAGTGGCAAGAGTATACTAGAACAGCATTATAAGTGAGTACCAAATAGCATCAGAATTTTGACATCCATTGCATTTTCCTATATACGAATTCGGTTTAGATTTATTTTGTGGCACTAGCAAGCATATCATCAGAATGATTTAGCCATGAATTTTCAGCATAGATGTTGTGTGGTTAGACCTATTTCCTATTGCTAGCAAACACTTAAAACAAGTTGAGTAGCTAATGCCATCCAAGGACTACATTTTACCCCGTAAGATTGATCCCATCTGCAGAGTTTCAGATCTGCCTATTGGCTTGTGTGTTTGACTTCTATTGATTTCTTGTGTTTGAACATGAAGGGATCTCCAATTGGTCTAATGCCATCAACCTGGCTGAAAAGGCTAAATCCCGACCATCCCGGCGAGCTGCTAAGAAAAGTAGCAGGATGATGGGATCGCCTGGAGATTATCACTTGGTGGGAATTACCAGGCAGACATTCATAGGATGATCAGGAACATGGAGAAAGAGGTTATGGCTAACTGTATCCTAGGTGAGCTATGTTTGTGTATGCATCATCTTGGTTCTCTAACAGTCTAACTAGCTTCGAACATCATGTGTCAACTGTAGTAACTTTCTTATGCTAAAATCTCCTTCTGGTTGCAGGTTGTTAGTAATGAACTTAACTACTTAAGTTATGGAGTGGGCGTGGGACACTGGGAAATGACAAGTACTCTCATGCTGGCATGTTTTTGGCTATCGCGGTGTACGGTGTGCCTCATGCAACAGTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA002018