BGIOSGA002027

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Revision as of 10:30, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA002027| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA002027, complete gene.| tag = B1066G1...")
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Gene Name

BGIOSGA002027

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA002027, complete gene.

LocusTag

B1066G12.17

Ensembl Transcript ID

BGIOSGA002027-TA

Ensembl Protein ID

BGIOSGA002027-PA

Length

5311

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:8513802..8519112

Sequence Coding Region

8518987..8519112,8518158..8518232),complement(8517858..8517998,8517601..8517696),complement(8517384..8517515
,8516176..8516328),complement(8516047..8516088,8515920..8515968),complement(8515467..8515562
,8515210..8515393),complement(8514870..8514990,8513802..8514611

Genome Context

<gbrowseImage1> name=IndicaChromosome01:8513802..8519112 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:8513802..8519112 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGACGCCGGCGAGCTGCCCATCGTGTACCACATCGGCATCGTGCTGGCCGCGCTGTGGGCCGCGGGCTCCCTCGGCTTCCGCCACTCCGTCCTCTTCCTCCTCGCCTTCCTCTACCTCTACATGGTAAATGCTCGCTGTGCAATGAAATTGCGGAAGAGAATACAACATGAAGAAATGAAATCTGCCTACCAACGAAGACTGCTATCTGATGCAGAATCAGTACGCTGGTTAAATTATGCAATAAAAAAGATGTGGCCTATCTGTATGGAGAAGATCGTCTCACAACTTCTACGACCCATCATACCATGGTTCTTGGATAAGTTCAAACCTTGGACAGTTAGTAAAGCAGGAGTTCAGGAGCTTTATATGGGCAGGAATTCACCACTGTTTACTTCAATGAGAGTTTTACCTGAGACATCAGATGATGACCATTTGGTTCTGGAGATAGGGATGAATTTTCTATCTGCTGAAGATATGAGTGCTGTACTTTCTATGCAGCTGCATAAGAGTGTCGGACTTGGAATGACTGCAAACATGCATCTGACTAGCATGCATGTTGAGGGAAAGATTCTAGTCGGTGTGAAGTTTGTCCGGAGTTGGCCATTTCTTGGCCGTGTAAGACTATGTTTTGTGGAGCCTCCTTATTTTCAGATGACTGTAAAGCCACTCATTGGTCATGGGCTTGATGTCACTGAGTTTCCAGGAATTTCAGGATGGCTGGATAAGTTGATGGATACTGCATTTGGGCAGACATTAGTTGAGCCCAATATGCTTGTTATCGATGTGGAAAAATTTGTATCGACTCCCTCAGACAATGACTGGTTCAGCATTGAGGAGAGACCTCCTGTTGCATATGTGAAACTTGAGATTTTAGAAGGAACCGACATGAAACCATCTGATATGAATGGGCTCTCCGACCCTTATGTGAAAGGTCGTCTTGGTCCTTTTAAATTCCAAACTCAGATACAGAAGAAAACACTATCCCCTAAGTGGTTTGAAGAATTCAAAATACCCATTACATCATGGGAGTCATTAAATGAACTTGCCATGGAAGTGTGTGATAAGGACCACATGTTTGATGACTCGCTTGGAACATGTACTATAGATATCCATGAGCTGAGGGGTGGTCAGAGACATGACAAATGGATATCACTCAAGAATGTCAAGAAAGGAAGGATTCACTTGGCAATAACAGTTGAAGATATATCAGAGGAGAAGGGGTTGGAAGAATCATCAAGGAAAGTTGATGCTGAACTACCAATATCAACATCCGTCAACAAGTTTAATGCTGATGAACTGCCTGATGAAAAGCAAGTCTTAGTAGATGAAGTGGAGCACATTAACATTGATGGGCAAGAACAACCTGGAGGATTATATGTGCATCGCCCTGGCACTGGAGTTCCCAAGACATGGGAATCACGGAAAGGGCGAGCACGTAATCCTGACACGGAGATTTACAAAGAAGTTGACAAATCAAAGGATGCGCCTACCCCAAAAAGCAGTGGACAAGGGGGTTTTTTTGGCTCCTTTTTCCGGAAGAGCTTGAAGAAGGGAAGTTTCCATGATATTGATCCCGGTATTCCTACAACGCCAGGGCCTCAGAGTGCAACAGAGCTTGATCCGAAGATCCCACAAACTCCACGTCCAAACCTTAAGGAGGCCGGTGAAAAACGGACATCGATAAAGATAGTAGTCGATGAAGATGCGAAACCGACAAGGAGTGCGGGAGATGCAGAGAACTTGACAGAAGATGTAGCCAAGGTGATGGAGAAAAACGCAGGTGAGCCAGGTAGATCACTGACAAGCATACTGAGTAGAAAGATTTCCAGGAAGAAACCAGAGGACAAGCTGTCTGATATCCCAGAGCAGACTGAAGCTCAAGCATCTGAGTTGGTGAAAGAAGGGCCTGTTCCAGTTGAGGATAAACCTATTGATGGTCATCCGACAACTGAAAATGGCAATGGAGATGGTGCTTCAGGAGAAGCAGCTGAAACGCAAACTAGTGCTCAGACTTCACAATGA</cdnaseq>

Protein Sequence

<aaseq>MDAGELPIVYHIGIVLAALWAAGSLGFRHSVLFLLAFLYLYMVNARCAMKLRKRIQHEEMKSAYQRRLLSDAESVRWLNYAIKKMWPICMEKIVSQLLRPIIPWFLDKFKPWTVSKAGVQELYMGRNSPLFTSMRVLPETSDDDHLVLEIGMNFLSAEDMSAVLSMQLHKSVGLGMTANMHLTSMHVEGKILVGVKFVRSWPFLGRVRLCFVEPPYFQMTVKPLIGHGLDVTEFPGISGWLDKLMDTAFGQTLVEPNMLVIDVEKFVSTPSDNDWFSIEERPPVAYVKLEILEGTDMKPSDMNGLSDPYVKGRLGPFKFQTQIQKKTLSPKWFEEFKIPITSWESLNELAMEVCDKDHMFDDSLGTCTIDIHELRGGQRHDKWISLKNVKKGRIHLAITVEDISEEKGLEESSRKVDAELPISTSVNKFNADELPDEKQVLVDEVEHINIDGQEQPGGLYVHRPGTGVPKTWESRKGRARNPDTEIYKEVDKSKDAPTPKSSGQGGFFGSFFRKSLKKGSFHDIDPGIPTTPGPQSATELDPKIPQTPRPNLKEAGEKRTSIKIVVDEDAKPTRSAGDAENLTEDVAKVMEKNAGEPGRSLTSILSRKISRKKPEDKLSDIPEQTEAQASELVKEGPVPVEDKPIDGHPTTENGNGDGASGEAAETQTSAQTSQ</aaseq>

Gene Sequence

<dnaseqindica>1..126#881..955#1115..1255#1417..1512#1598..1729#2785..2937#3025..3066#3145..3193#3551..3646#3720..3903#4123..4243#4502..5311#ATGGACGCCGGCGAGCTGCCCATCGTGTACCACATCGGCATCGTGCTGGCCGCGCTGTGGGCCGCGGGCTCCCTCGGCTTCCGCCACTCCGTCCTCTTCCTCCTCGCCTTCCTCTACCTCTACATGGTACGGTGCTCTTCTGCCGCTGCCGCCCGCGCCTCTCGCTGATAAGTTGATGCGACTTTTTTTTTTGTCTTTTTTGAGCTCCTTTACGGCATATGCTTAGGTGACAGTTGTGATGGATGCATCGCTCTCTGGGAGGTTTTTTTTTTGCCTTTGTTTCTATCAGAAAATTTCCTTTCCTTTCCTTTCTGCGATGCGACTGATTCTGTATCTGATTCCGGTTGCAAATTTCTTTCCTTTCTGCGATGTGACTGATTTAATATCTGATTCCGGTTGCGCTTTCTTTAAACTTGAGTGTATAATTCTTAGTGTGTATGGGAGAAAATGATGTATATCGACATGCTTTGGAATGGTTGAACATGCTATATGGTTGCTTGTGTGCTATGGACTATGGTTGGTTGATTACCACTGGGACATGGTGCTAATTGATAGTTCTCTATCCATATGTGTATATCAGCTGGTACAATGGTAGGGACATCAATACTGCCCTATTAATCTTATGTATTCCATAATTTTTGTATTTTGGCCCTTTTTTATGGAATTATTTGGTCACAATTGGATATGTACTAAAGTTCATGTTATGGAATAGAATTTATTTCTCTTTTAAATAAAAGAGATAGAGTGGAATTCATAGTTTCATACTTCCAATATAGATGAATCGGCATGTCTTACACATCAGATAATCGAAATGAAACAAAAATATGTTACTCTTTCGTTCCAGAACTAAAGTAAATATCGTGTTACCTTTTCATTGTAGGTAAATGCTCGCTGTGCAATGAAATTGCGGAAGAGAATACAACATGAAGAAATGAAATCTGCCTACCAACGAAGAGTATGCTCCTTTCTATGATCTATGATTTGTTCTTCTTTTATATTTTGCAAGGATGAACCTGGTTAACTAGGCTCCCACATTCTTTTGCTACTTTTCTATTTCTACTGAGATGTCTGAGAACGCTTGAGTAGATTTAGCTCATTTTGTTTTATGTATCAGCTGCTATCTGATGCAGAATCAGTACGCTGGTTAAATTATGCAATAAAAAAGATGTGGCCTATCTGTATGGAGAAGATCGTCTCACAACTTCTACGACCCATCATACCATGGTTCTTGGATAAGTTCAAACCTTGGACAGTTGTACGGTTTCCTTCTTGCCTCTTGCTTTTGCAATTGATGAGATTCCACTATATGAATTGTACCTTGAGGTTCTAGTTTTTCCATGAAGTTCTATAAATTTATTTTTATTTCTTTAAGTAGGCATTACCCTCAATAGCTCAACTGTTGTAGTTATCCCGCAGAGTAAAGCAGGAGTTCAGGAGCTTTATATGGGCAGGAATTCACCACTGTTTACTTCAATGAGAGTTTTACCTGAGACATCAGATGATGACCATTTGGTGGGTACTAATGTCTTCTGATTTGAGTATTTCTTTTTCGTCCATGGTAAAAATTGTAATGATTTTTGTGCCATCTGATGGCCAGGTTCTGGAGATAGGGATGAATTTTCTATCTGCTGAAGATATGAGTGCTGTACTTTCTATGCAGCTGCATAAGAGTGTCGGACTTGGAATGACTGCAAACATGCATCTGACTAGCATGCATGTTGAGGGAAAGGCAAGTTCTACGTTTTTAAGGGGATGCAATTTATCTACTTAGCTTCATTATTCTGTCACTAACAAGATTAACTTAACATACTATTAGAAATAATCAACTTTTAAAGCCGTTACAGCACATGGATTTTCAAGTTCTGTGTTGTTTATATCTAATGGTAAGTTTGATTTCGGAGATACTACACTAAGTCCAATCACTAGATTTATTTGTATCTTTTACAGTCTGCTTCATTAGGCACACTTAACTTTTTCAGGTTTTTTTTCAGTCTATTTTGATCTTGAAATCATCCAAGCTATTTGTTTGTGGTTCTAACGAAAGCAGACAGATATTTGGTGCTGAGACAAGTATGGTGTATTTCCCTCTAACATAAGAAAGCTCCTTTCATCCTAAGTGGATTGAAATTTATGTTATGATGATGTTGCCTCTGATATCCAAATAGTATGTGAACAAACTATACAGATTAACAAGATACACATATTGCAGAAGTCTCTTGATCTTTCGTGTTCATTATACTCAAATGAACATGTTAACTCAAAACTACATGAGTAACATAATTCTCCCAAAAAAAAAATTGATGACATAATTTTTTTATTAACCTCTTGCTAAAAAATGGTCAATGCTCTCTACTAACCTTGCTTGAAAAAAACAGATAAGGACATTGTTGACCCAGCGAAAGGAACAGAAAAAAAATCCTTCGTTATCTTAATGGAGGCAAAGAAATTCTAGGCAAGCACCATTGTTGCTTGTGTAGGTTGTTTGCAGCTACTCTGTTCTGAGTGCTATAACCTGATTGTGATGCTAACAAAGGGAATGGGGACTTCATTGTCAAGAAAGGAGATACATATTCTTCTCATTTTTAAGAAAGTAAAATAGTAAAGGGAGATCATTATCTAAAAATGTAAGAGAGGCACTGAACTGTTTGTTTAACAAAATATTATTGTAAAAAACCCTCCCCAGGAAATCAGGATAAAAAGTTATAGAGTTTCTGCATATATTCGTTCATTAAGCAGTTTCTTCCCTTACATTGTACTCAGAACATGCATATGTTCATCATGCAGATTCTAGTCGGTGTGAAGTTTGTCCGGAGTTGGCCATTTCTTGGCCGTGTAAGACTATGTTTTGTGGAGCCTCCTTATTTTCAGATGACTGTAAAGCCACTCATTGGTCATGGGCTTGATGTCACTGAGTTTCCAGGAATTTCAGGATGGCTGGTGATTCTCCTGTACCATAATTTTCGTTTCTCCAATGTTAGTGAATTTGTTTTTTACTGATCACTTGGCCCCTTGGAATTTTTCCAGGATAAGTTGATGGATACTGCATTTGGGCAGACATTAGTTGAGGTTAGATTTTTATGAACCTTGGCTGAAGGCTGTTCATTGTATATTTTTTCCTTGCTGATGCAACTTTTCTTCTTCCAGCCCAATATGCTTGTTATCGATGTGGAAAAATTTGTATCGACTCCCTCAGGTAGGAGGAAGCTTTGCTTTCTGCTTGTGTTTAAGGAATCATCCTTTCATTCCTGTTGTTTTCCTTTCAATCCTCCTCTATTTTGTGTTAGCTTCCAACAATTGTAGGGTTAGTCTATTATCATATGAATCGGCCTCTTTAGACCACTTGCTTTAGCCAAGTGTTCTAGCAAATGCTAATAGGATATGCCCCTTCAAACCCTGTCATTGCCTTGTGTTTTTTAACCTACCTTTTTTTAGAAAAAGAGTATTTCTCTTTCTAACTTTCTCTGATGACAGACTTCCAGTCTTGTTTCAAGAAAAAATATGATAACCATTATTGCTGTTTACTTTGCATTAACTTCTTCACATTCTGCAGACAATGACTGGTTCAGCATTGAGGAGAGACCTCCTGTTGCATATGTGAAACTTGAGATTTTAGAAGGAACCGACATGAAACCATCTGATATGAATGGTGAGAATTACCTGCATTAATGTTCGTGTTGCCCGTTGTTTGATTTTGACTCACCTTACATTCCATTATATAGGGCTCTCCGACCCTTATGTGAAAGGTCGTCTTGGTCCTTTTAAATTCCAAACTCAGATACAGAAGAAAACACTATCCCCTAAGTGGTTTGAAGAATTCAAAATACCCATTACATCATGGGAGTCATTAAATGAACTTGCCATGGAAGTGTGTGATAAGGACCACATGTTTGATGACTCGCTTGGGTATGTCCTGTTTACTGAACTCGTGTTGCTAAATGGTCAGCTATATTTGGCATCAACTCATTGCTGTATTCAGTTTAACTTTGTAAAAGATGACAACTTGGCACTTATTTTATCTCAGCCTCAGAGTTAGCCTTTCTGATGTTTTATATTGAATTGACCTATTTGGTATTTTATACTAGAAAAAAAGTGAAAGTACATTACACTTCATTTTGTTTACAGAACATGTACTATAGATATCCATGAGCTGAGGGGTGGTCAGAGACATGACAAATGGATATCACTCAAGAATGTCAAGAAAGGAAGGATTCACTTGGCAATAACAGTTGAAGATATATCAGAGGTTGGTGATAACATTTTTAATTTTTTTTTCCGTATATTTTTGGAACATGTAAGTAGTCATTTCATGAAGGTAGGGAAGTTGCAGCAAAATGATTGATAGCACTAGACACATCCTCTTCATCAGAATATTATCTAGTAAAACAACTGTTGAGCTAAACTATACATTATGCATTGAAAGCTTTTAAAAGGAAACTGCAAGTACGTATTTAAACTGTTGAAGTTCGCCCCTACCTAAACTCATTCACAATTGTATTTTCAGGAGAAGGGGTTGGAAGAATCATCAAGGAAAGTTGATGCTGAACTACCAATATCAACATCCGTCAACAAGTTTAATGCTGATGAACTGCCTGATGAAAAGCAAGTCTTAGTAGATGAAGTGGAGCACATTAACATTGATGGGCAAGAACAACCTGGAGGATTATATGTGCATCGCCCTGGCACTGGAGTTCCCAAGACATGGGAATCACGGAAAGGGCGAGCACGTAATCCTGACACGGAGATTTACAAAGAAGTTGACAAATCAAAGGATGCGCCTACCCCAAAAAGCAGTGGACAAGGGGGTTTTTTTGGCTCCTTTTTCCGGAAGAGCTTGAAGAAGGGAAGTTTCCATGATATTGATCCCGGTATTCCTACAACGCCAGGGCCTCAGAGTGCAACAGAGCTTGATCCGAAGATCCCACAAACTCCACGTCCAAACCTTAAGGAGGCCGGTGAAAAACGGACATCGATAAAGATAGTAGTCGATGAAGATGCGAAACCGACAAGGAGTGCGGGAGATGCAGAGAACTTGACAGAAGATGTAGCCAAGGTGATGGAGAAAAACGCAGGTGAGCCAGGTAGATCACTGACAAGCATACTGAGTAGAAAGATTTCCAGGAAGAAACCAGAGGACAAGCTGTCTGATATCCCAGAGCAGACTGAAGCTCAAGCATCTGAGTTGGTGAAAGAAGGGCCTGTTCCAGTTGAGGATAAACCTATTGATGGTCATCCGACAACTGAAAATGGCAATGGAGATGGTGCTTCAGGAGAAGCAGCTGAAACGCAAACTAGTGCTCAGACTTCACAATGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA002027

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA002027&oldid=39751"