BGIOSGA002202

From RiceWiki
Revision as of 10:32, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA002202| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA002202, complete gene.| tag = P0498B0...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA002202

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA002202, complete gene.

LocusTag

P0498B01.19

Ensembl Transcript ID

BGIOSGA002202-TA

Ensembl Protein ID

BGIOSGA002202-PA

Length

1940

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:5533940..5535879

Sequence Coding Region

5535636..5535879,5535429..5535493),complement(5535001..5535082,5534742..5534809),complement(5534573..5534656
,5533940..5533996

Genome Context

<gbrowseImage1> name=IndicaChromosome01:5533940..5535879 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:5533940..5535879 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGGCGGATAAGCCGGCTCCGGTGAGGGTGCTGTACTGCGGCGTCTGCGGCCTCCCCGCGGAGTACTGCGAGTTCGGCCCGGACTTCGAGCGCTGCAAGCCGTGGCTCCGCGCCAACGCCCCGGGCGTCTACCCCGACGAGCTCCTCGCCTCCTCCTCCTCCGCCGCCGCCGACGTCGACAAGGTCGGGGAGCGGCTTCAGGGCGTCGGGATCTCCGCCGCCGATGGCTCCACCAGTGCAGGGGATGCTTCTGCGTCGAAGCAGGAAGAGGTGAAGCGCTTGCCTGGTGGTAAGGTCAAGAAGAAGGATAAACAAGAGGTTGTGATTGAGAAGATTGTCCGCAACAAGCGCAAATGTGTTACTGTGGTGAAAGGTCTGGAATTATTCGGTGTCAAGCTGAGTGATGCTTCAAAGAAGCTGGGGAAGAAGTTTGCTACAGGAGCATCTGTTGTTAAGGGCCCCACTGAGAAGGAGCAAATTGATGTGCAAGGGGATATATCATATGATATCGTGGAGTTCATTACAGATACTTGGCCTGATGTACCTGAGTCAGCCATTTTTTTCATTGAAGATGGAAGGAAGGTTCCTGCTGCTTGA</cdnaseq>

Protein Sequence

<aaseq>MAADKPAPVRVLYCGVCGLPAEYCEFGPDFERCKPWLRANAPGVYPDELLASSSSAAADVDKVGERLQGVGISAADGSTSAGDASASKQEEVKRLPGGKVKKKDKQEVVIEKIVRNKRKCVTVVKGLELFGVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDISYDIVEFITDTWPDVPESAIFFIEDGRKVPAA</aaseq>

Gene Sequence

<dnaseqindica>1..244#387..451#798..879#1071..1138#1224..1307#1884..1940#ATGGCGGCGGATAAGCCGGCTCCGGTGAGGGTGCTGTACTGCGGCGTCTGCGGCCTCCCCGCGGAGTACTGCGAGTTCGGCCCGGACTTCGAGCGCTGCAAGCCGTGGCTCCGCGCCAACGCCCCGGGCGTCTACCCCGACGAGCTCCTCGCCTCCTCCTCCTCCGCCGCCGCCGACGTCGACAAGGTCGGGGAGCGGCTTCAGGGCGTCGGGATCTCCGCCGCCGATGGCTCCACCAGTGCAGGTTTTTTTTCCTTCCTCCCCCGGCTACTTCTTTCGTGATGATTCTCTCTGTTGTATCAGTAGGATGTCAGACTCCGATCTGGGATGGGATGGTGCACGAGAGAGAGAAAAGTGTATCTAATCTTTGCGCTACAACTGTGTAGGGGATGCTTCTGCGTCGAAGCAGGAAGAGGTGAAGCGCTTGCCTGGTGGTAAGGTCAAGAAGAAGGTTGGTTCCCGCAGCTCACTCACTTGGTTATCCTGCAACTCAGTTATTACTGTCGTTTGCATATGATGTCTAAGCCATAATAGTTAGTTTAGTGTGTGGTATGGTGATTATTCGCGTACTGAGATACTCAAAATGTTAAATGTGCTACTACAGTAATGGTTAGCTCAGTGTGCTGGAAGAAATATAATTTTTGCTGGAAGTTTAGTGGGTGGTATGGTCATTTTAATACACATCAGCTATTGTATTGGTGCCTTCTGGTTTGAGTCCAAGGCTGTCAAAGTCCACGTGTATGAAATTTTGGTTGATAATAACATCGTTTATGATGAGTTACCCTTTTGTCTTACAGGATAAACAAGAGGTTGTGATTGAGAAGATTGTCCGCAACAAGCGCAAATGTGTTACTGTGGTGAAAGGTCTGGAATTATTCGGTAAGTGTTGTTTTCATAAACAATTAAATGACTGTTTACAAACTGAAAGCTAAAACCGGTAAGCTGACCAAAATGAACATGGCTGTATTGTTAACACTATAGAAGAAGATGTATTTTCAATATTGAATCCCCGTTTATACTGAAGATATGGTATATTTTTATGGATTATACTTTGTTTCCTGGACAATTAGGTGTCAAGCTGAGTGATGCTTCAAAGAAGCTGGGGAAGAAGTTTGCTACAGGAGCATCTGTTGTTAAGGTATACCAGTAATCAGGGCTCATATTGGCCTTTGATATCAATGTAAGCATTTTTTTTAACACCTGTTCTTTATTGCCTTTCTTAGGGCCCCACTGAGAAGGAGCAAATTGATGTGCAAGGGGATATATCATATGATATCGTGGAGTTCATTACAGATACTTGGCCTGATGTAATTCATCCATCTTCTCTTCAATTTATTGTGGTTTTACAGTTTTCTCTCTTTTTATTTACTCGCATGTTTGGTATCATTTGTGATATTCTGTCCAGGTGCGAATTCATTTAGTTTCATAACAATAGATAGAAACCTATTCAATTGGATTATAACATTTAGTTTCACATTTAAAAATAAACAAAATCGAGTAATAATATACTTCTCTAGTCTGTCTGTATGTGATGTTCCTTGAATGTATAGGAGTAGAGAACCATGGTAACATTTGGTGACTAGATATTCAGTGAAAAGTTATATCCTGTGGAGGTTTTGGTTTGTACATGGAGTTCCTAACTCCCATTCATTAACTAACTGGGAAGGTCTAAAGTTGAGTCCCAAGGCCCAAGGGCAAGGAGGAAGTCCTATGGACCAACAGAGCCTGATATACCTCTCTATAACACAAATTTGGAAAATTGTGACCTGGGAGTGTTGTTATCACCACCATTTGAATGCCTCAGCTGTTAAAATCGTAGTATCTTCATCAAAGATGTAACTATGCTATTTATTGAATTATTATCATTCATTCCTACCTTTCAGGTACCTGAGTCAGCCATTTTTTTCATTGAAGATGGAAGGAAGGTTCCTGCTGCTTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA002202