BGIOSGA002221

From RiceWiki
Revision as of 10:33, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA002221| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA002221, complete gene.| tag = P0710E0...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA002221

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA002221, complete gene.

LocusTag

P0710E05.30

Ensembl Transcript ID

BGIOSGA002221-TA

Ensembl Protein ID

BGIOSGA002221-PA

Length

1232

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:5255781..5257012

Sequence Coding Region

5256357..5257012,5255781..5256036

Genome Context

<gbrowseImage1> name=IndicaChromosome01:5255781..5257012 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:5255781..5257012 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGCCCAAGCGACTTGTCTGCTTCTTGGCCGTGGCCGCCGCGCTAGCCACCACCTGCCACGGGTGGGGCGCCGGCGCCGGCGATGTCGTGTCGTCGTCGGCGGCGGCGCTCTCGTTCGTGGACAGGCTGAGGCAGATGATGATCCCGGCGGCCGTGGGCGACGGCGACTACTGCGACAGCTGGCGCGTCGGCGTGGAGGCGAACAACGTGCGGGGGTGGACGGCGGCGCCGCGCAAGTGCGACAACTACGTCGAGAACTACATGCGCGGCCACCACTACCGCCGCGACAGCAAGGTCGTCGTCGACGAGGCCGCCGCCTACGCCGAGGCCGCCGTCCTCTCCGGCGACCCCGCCGCCGACGCCAACGCCACCTGGGTGTTCGACGTCGACGAGACCGCCCTCTCCCACGTCAAGTTCTACAAGAAGCACGGCTTCGGGTACCACAGAACCGACGAGCCGGCGTTCATGGAGTGGCTGATCGCCGGCAGAGCGTCGGCGTTGCCGAACACGGTGACGCTGTACAAGAAGCTGCTCCTCCTCGGCGTCAAGATCGTCTTCCTGTCGGACAGGCCGGACACGCCGGAGCTGAGGAACGCCACCGCCACCAATCTCATCAAGGAAGGCTTCGACTGCTGGGACGAGCTCATATTAAGGTCGGAGAGCTCGACGGCGACGGGATCGGTGGTGGAGTACAAGTCGGGGGAGAGGAAGAAGCTGGAGGAGGAGAAGGGGATGGTGATCATCGGCAACATCGGCGACCAGTGGAGCGACCTGCTGGGCTCGCCGGAGGGCCGCCGGACCTTCAAGCTGCCCAACCCTGCCTACTACATCGACAACTACAAGCGCGCCGGCACCGCCGTCCGCGCCGCCGTAGCCATTACAGCCTCCTCCTCCTCGTCGTCGTCGTGA</cdnaseq>

Protein Sequence

<aaseq>MAPKRLVCFLAVAAALATTCHGWGAGAGDVVSSSAAALSFVDRLRQMMIPAAVGDGDYCDSWRVGVEANNVRGWTAAPRKCDNYVENYMRGHHYRRDSKVVVDEAAAYAEAAVLSGDPAADANATWVFDVDETALSHVKFYKKHGFGYHRTDEPAFMEWLIAGRASALPNTVTLYKKLLLLGVKIVFLSDRPDTPELRNATATNLIKEGFDCWDELILRSESSTATGSVVEYKSGERKKLEEEKGMVIIGNIGDQWSDLLGSPEGRRTFKLPNPAYYIDNYKRAGTAVRAAVAITASSSSSSS</aaseq>

Gene Sequence

<dnaseqindica>1..656#977..1232#ATGGCGCCCAAGCGACTTGTCTGCTTCTTGGCCGTGGCCGCCGCGCTAGCCACCACCTGCCACGGGTGGGGCGCCGGCGCCGGCGATGTCGTGTCGTCGTCGGCGGCGGCGCTCTCGTTCGTGGACAGGCTGAGGCAGATGATGATCCCGGCGGCCGTGGGCGACGGCGACTACTGCGACAGCTGGCGCGTCGGCGTGGAGGCGAACAACGTGCGGGGGTGGACGGCGGCGCCGCGCAAGTGCGACAACTACGTCGAGAACTACATGCGCGGCCACCACTACCGCCGCGACAGCAAGGTCGTCGTCGACGAGGCCGCCGCCTACGCCGAGGCCGCCGTCCTCTCCGGCGACCCCGCCGCCGACGCCAACGCCACCTGGGTGTTCGACGTCGACGAGACCGCCCTCTCCCACGTCAAGTTCTACAAGAAGCACGGCTTCGGGTACCACAGAACCGACGAGCCGGCGTTCATGGAGTGGCTGATCGCCGGCAGAGCGTCGGCGTTGCCGAACACGGTGACGCTGTACAAGAAGCTGCTCCTCCTCGGCGTCAAGATCGTCTTCCTGTCGGACAGGCCGGACACGCCGGAGCTGAGGAACGCCACCGCCACCAATCTCATCAAGGAAGGCTTCGACTGCTGGGACGAGCTCATATTAAGGTCACATTACAAACTAATTAATCTCTGAATTCCTGCGTGTACTTCCTCCGTCCTAAAATATAAATATTTTTAGTATAGTGACAAATCAAATATTTTAAACTTTAACCATTAATAGTAAAAAAAGATCAATCATGTAAAATTGATGTTACTAGATTTATCATTAAACAAACTATCATGATATGTAACTTTTTTTATTTAAAACATCTTACTTATATAGATATTGTTGGTTAAAGTAGCATCTCGCAGACCGTGTATAAGAGTCTAAAAATGCTTACATTTTGAGACGGTGCGAGTATAAAATTGATGAAACTAACGAACAGGTCGGAGAGCTCGACGGCGACGGGATCGGTGGTGGAGTACAAGTCGGGGGAGAGGAAGAAGCTGGAGGAGGAGAAGGGGATGGTGATCATCGGCAACATCGGCGACCAGTGGAGCGACCTGCTGGGCTCGCCGGAGGGCCGCCGGACCTTCAAGCTGCCCAACCCTGCCTACTACATCGACAACTACAAGCGCGCCGGCACCGCCGTCCGCGCCGCCGTAGCCATTACAGCCTCCTCCTCCTCGTCGTCGTCGTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA002221