BGIOSGA002251

From RiceWiki
Revision as of 10:33, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA002251| Description = cDNA, clone: J065037E24, full insert sequence| Definition = Oryza sativa Indica Group BGIOSGA002251, complete gene.| ...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA002251

Description

cDNA, clone: J065037E24, full insert sequence

Definition

Oryza sativa Indica Group BGIOSGA002251, complete gene.

LocusTag

OJ1174_D05.16

Ensembl Transcript ID

BGIOSGA002251-TA

Ensembl Protein ID

BGIOSGA002251-PA

Length

4038

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:4711017..4715054

Sequence Coding Region

4714917..4715054,4714666..4714776),complement(4713736..4713822,4713616..4713653),complement(4713451..4713532
,4713211..4713317),complement(4712927..4713089,4712764..4712853),complement(4712474..4712585
,4711996..4712038),complement(4711017..4711614

Genome Context

<gbrowseImage1> name=IndicaChromosome01:4711017..4715054 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:4711017..4715054 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCCTCGCCGGCGAAGCGCGCGAGGCCCCCGGCCTCGTCCCCGGTGGACCCCCCCGCGTCGCCGCCGGCGCCGGAGGACCCCCGCGTCCTCCTCCGCCGCAGCTGGGAGCTCGCGTCGGTGCTCCACTTTCTCCGGGTGTTTGAGCCGGTGATCGAGGGGAACCTGGGGCTATCAGCGGAGGAGATCGAGACCGCGCTCATCGCCAATAACCACGACCTTGCCCGCATCCATATTGCGCTTATAAAGGGAATACCACCAACTATCAAAAATCTGAAGGTCGATGATGGATGGATAAAGGCAACTGCCAAGAAATTATCAGATTGGTGGACATGGGTTGCTGAAGGTGCAAACCCGTTCAAAATTAATCCAGGGAAGGAAATTGACACGTATAAACAGCAAGATCCGATTAAACGCTTGTTGATACTTAAAGCACTCTGTGAAGTTCGTTCAGAGCAAAATGACGCGGTATGGTATGTTAATGACGAGATGAAAAGAGGAGTTGATATTTCCAATTTCCGAAAAGAAAAGTTAGGAAGTAGTAGTAACGGAACTATATACTGGTATGATGGTGACTCAACTATTGGCCATAGATTGTATAGTGAGTATGTAACACTTGATTTCAAGCGCAACTTGAAGGGAAAGAATGGTCGTTTGACAAAGCCAGTTATCAATATTCAGTGGGAAACAGTTGCGACTAACCTTGATGAGTTCGTTGAGATATCGGATAAACTATGCAGTAAAGGTCGACCGGAATCTGCCATCGGCGAGCATCTTAAGACAGAAATTATTCCAGATGTGGAGAAGCTTCAAAAGAAGAAGGAGCGGGATTTAAAACGTCAGCAGAAGAAGGATGAACTTTTAGCTTATGCTACAAGTTTCCAAACCCGTTCATTGCGTGAACGTAGGCCTGTCAGCTACAATTACTCTGATTACGATCGTTCTATAAAGGAGGCAATAAAAGCTGCAGCGAAATCAAAAGAATCTGATCCACAGGAGGCAGGCAAAAAAGAGAAGCGTGCCTCACATCAGGGCAATAAAGGAGCCAATGGAGGGTCTGACATTGGTCCAGAGCAGAAGGAAGATGGACAGGAGGATGCTGGAGGGTCTGACGTCAATCCGGAGCAGGACAAAGATGGCGGACAGGAGGATGTCGAGTCCCTTGATGACCTGAGTTCTGATGAGGATGAAGACAGAGACTACAATGGTAAGGATGATGACTCGTCAGGCAGCGATGGAGAAAATGATGTTGGCAGTGATGGAGAAAATGATGCTTATGATCCCAACAAGGGTGATACTGAAGAGGAGGAAGTATTTGTCCCACGTAAGAGGACTCGTCTTGCCTCCCGTCGGTTTGACAAGCCTCCGCAAGGGCTCCGCCGGAGTCGGAGAAATATGAAAAACGACGAATACGTCATGCGCCCAGGACAGCTTACTCCTCGATCCATGACAAAGAGAACAATGAGGCAGAGGCCAACATCTATCTCAAAGCAGTTTTCTCTATCAGGCTCGGAAGATGATCGTGAAATGATAGTTGCAGACTCTGAGGAGGAGTCCGGCTCACCTTAG</cdnaseq>

Protein Sequence

<aaseq>MASPAKRARPPASSPVDPPASPPAPEDPRVLLRRSWELASVLHFLRVFEPVIEGNLGLSAEEIETALIANNHDLARIHIALIKGIPPTIKNLKVDDGWIKATAKKLSDWWTWVAEGANPFKINPGKEIDTYKQQDPIKRLLILKALCEVRSEQNDAVWYVNDEMKRGVDISNFRKEKLGSSSNGTIYWYDGDSTIGHRLYSEYVTLDFKRNLKGKNGRLTKPVINIQWETVATNLDEFVEISDKLCSKGRPESAIGEHLKTEIIPDVEKLQKKKERDLKRQQKKDELLAYATSFQTRSLRERRPVSYNYSDYDRSIKEAIKAAAKSKESDPQEAGKKEKRASHQGNKGANGGSDIGPEQKEDGQEDAGGSDVNPEQDKDGGQEDVESLDDLSSDEDEDRDYNGKDDDSSGSDGENDVGSDGENDAYDPNKGDTEEEEVFVPRKRTRLASRRFDKPPQGLRRSRRNMKNDEYVMRPGQLTPRSMTKRTMRQRPTSISKQFSLSGSEDDREMIVADSEEESGSP</aaseq>

Gene Sequence

<dnaseqindica>1..138#279..389#1233..1319#1402..1439#1523..1604#1738..1844#1966..2128#2202..2291#2470..2581#3017..3059#3441..4038#ATGGCCTCGCCGGCGAAGCGCGCGAGGCCCCCGGCCTCGTCCCCGGTGGACCCCCCCGCGTCGCCGCCGGCGCCGGAGGACCCCCGCGTCCTCCTCCGCCGCAGCTGGGAGCTCGCGTCGGTGCTCCACTTTCTCCGGGTGAGCCGTTTCGGCTAGGGCTTCCTTTTTTTTCTTTTTCTTTTTTTTTTGTCCCTCTCCTGCTTCAAGGGTTGGGTTGGATTGGTATTGGCGTGTTGGGCTTACGGGGTTTCGGTTTGGGGATTTTTTTTGGTTTTCAGGTGTTTGAGCCGGTGATCGAGGGGAACCTGGGGCTATCAGCGGAGGAGATCGAGACCGCGCTCATCGCCAATAACCACGACCTTGCCCGCATCCATATTGCGCTTATAAAGGTGTAGTTTGTTTTTTCAGGCTGCACCTATGCACTCCTGACTTCTGTAGTTATGGTTGGATCGTGTAGGCTTTGGATTGCAGAATGCCTGCATTGTAGACAGTTTGGTGATCTGATTTGTTTAAGGCAGCAGATACTCTGCCTGTAGGTTTGTTCGTGCTTGCTTTGCACTAGAGGCATTGTGTATCTGCAGGGAGGGTTTGAACTGAATACACACTTGCGTTGGTCTATGTAATCTTTAACCTTGTCACAAACCATGACAGGTTTTCTGCAAAAAGGGAAAAAACTTCATTTCTTTGTCCTTGTCCTTTTTGTTTGCAATCACCGAGTAAGTTGCAGGTTATGTAATCAGCTAGGCTTGTCAAAAACCATAACCTGTTTCTCCATAGTTATCTTTTAAAAAACTTTATCTATATGTAATTCTCCTTTTTTTTTTCTTTTGAAAGTACTGAATAAGTTCAATCAATCATTTTTTAATCTTGTTAAAAAAACAGTGACATAGTGACTGATTAACTTCATTAACTGTTATGGACATGCCTGTTTGAGATTTCTAAATCACGTGACATACAAATAAAACAAGCTTGCATCATCTGCGTTGCTGTGGGAGGCATCTTTCCTTATTGAGCTATTGTGTACTAGTAACAAGATGTTTGCATCAGTTATTCTTATACTGCATTACTACCCTGTATTAGGGAGACCAAATATTATGATACCTTTTCTTTTCTCTAAGTTTCATTTTTTTTTTTTGTTGTTGATGTAATGACGAATAAGCCTGTTTATGTTACTGTTTTGCCATGTTTGTCTGAAATGATGTTTGCTAAGTTGTAATAGTCACGTGTATCAGGGAATACCACCAACTATCAAAAATCTGAAGGTCGATGATGGATGGATAAAGGCAACTGCCAAGAAATTATCAGATTGGTGGACATGGGTATGTTTTAGTTTGCATAAAATTTTTACTAGTGTAAATATAACTAGAGCAGTCCCAGACATTAACATCATTTTGGTTTCAGGTTGCTGAAGGTGCAAACCCGTTCAAAATTAATCCAGGGTATGCAGGATAATGCATTGTAAATAAGCTTTTTGACTATGACTCTTAGGTAACTTCATATCGTGACTTATTTGTTTACCCAGGAAGGAAATTGACACGTATAAACAGCAAGATCCGATTAAACGCTTGTTGATACTTAAAGCACTCTGTGAAGTTCGTTCAGAGGTAACGATTCTATGAGTTCACCTTGTTGTATTTGCAGTTTCCTTTCAGGTTTAATAATCTAATTAGTCAAATACCCCCAAGTCCTTCAGATTTTAAATGCACATTATTCTGATAGACATTATCTATCCTGCAGCAAAATGACGCGGTATGGTATGTTAATGACGAGATGAAAAGAGGAGTTGATATTTCCAATTTCCGAAAAGAAAAGTTAGGAAGTAGTAGTAACGGAACTATATACTGGTAAGAGAGTTTCTGTTCACTTTCATGTTATCATTTGCAATCAACGAGTCACTGTTAGCATGCCTTTGCGTCCTCTTTTTTTCCTGCTGACACTGTCCATTGAAAAATTTCTGCTTGTTAGGTATGATGGTGACTCAACTATTGGCCATAGATTGTATAGTGAGTATGTAACACTTGATTTCAAGCGCAACTTGAAGGGAAAGAATGGTCGTTTGACAAAGCCAGTTATCAATATTCAGTGGGAAACAGTTGCGACTAACCTTGATGAGTTCGTTGAGATATCGGTAAGTGTATTGGCTGTTCATTTTCTTGTGCAGCTTGTGTTTTGTTCCCATATTTGACATATGGTATCAACAGGATAAACTATGCAGTAAAGGTCGACCGGAATCTGCCATCGGCGAGCATCTTAAGACAGAAATTATTCCAGATGTGGAGAAGCTTCAAAAGGTAGCTTTCAGCTCACGTGCTTTCTACTCTGTTGCGTCTATATTTCCCCAGGGGTGTCCAATACATGAATGCATTTATATTCTACTTTGGAATCAGGATTTATGCTTGGCAGCAAGATATGAAGCTCATACTCTACTTTTATGATTTATGACCACATTTTTGTCTGTTTAATTTGCAGAAGAAGGAGCGGGATTTAAAACGTCAGCAGAAGAAGGATGAACTTTTAGCTTATGCTACAAGTTTCCAAACCCGTTCATTGCGTGAACGTAGGCCTGTCAGCTACAATTACTGTAAGGGGCTTTCTGTTTAGCATCCTTGAGTACACAAGGTGCATGACAACTTGAGACTGTTCATCATATTTTACGAATAGTAGTCTGGATGCATAACCAACAGCTTGCTGGGTACATTGAATTTCATGTTGCATCTCTCATTTCTTCTGCCAGTCCCTCATTTAGTAGAAGTGTAGATACTTTACCCATTTACCGTTTCCAATCCATATAACTGTAAGCCTAGTGGAAAATGATGATTGTTGACAGCTCTCACTAATAACACAAGCTCTAAGAATTGCAGCAAATGCTATAGGTTAATACAGATGTTTTCAGCATTCAACAGGCTCATATTCTAATTCTATTTTTAAATACTCAGTAAAACTGATCAAAGTATTTATGTTTTGTGACCAATTGCTATGTCTTGGCATTGATACCCTTGATTTGCTTTGTGTGCAGCTGATTACGATCGTTCTATAAAGGAGGCAATAAAAGCTGCAGCGTAAGTTAAAACCATTCTTTCCCTTCCTGTTTTCCCCCTAGTTCGTTGGCAGTTAACATTTGGAACACTGCAACAATATAAGCAATTAAATACCTTCGATTTCTTGTGGTACAGCATAGTCCCTCATTACTAACATTAGCAGCATCTGATAGTATAAGCAAATTAGAAGGAGAGGGGGGGGGGGATAACTGGTAACAGGTTTGAGACTTGTTGGTTCCAGGAATTGACATGTCAGATTTACTAGAATTTAGAAACAGCAAACTTGAAGTATGGATCACATTCTCCATGCTTATTTAGCACTGAGCTTTTAGGAATTGTTGCTCAAGTAATCCAAAATGCAAAATCATTCTTCTTGAAAAGAATTCACGTGCTTGAATGCAGGAAATCAAAAGAATCTGATCCACAGGAGGCAGGCAAAAAAGAGAAGCGTGCCTCACATCAGGGCAATAAAGGAGCCAATGGAGGGTCTGACATTGGTCCAGAGCAGAAGGAAGATGGACAGGAGGATGCTGGAGGGTCTGACGTCAATCCGGAGCAGGACAAAGATGGCGGACAGGAGGATGTCGAGTCCCTTGATGACCTGAGTTCTGATGAGGATGAAGACAGAGACTACAATGGTAAGGATGATGACTCGTCAGGCAGCGATGGAGAAAATGATGTTGGCAGTGATGGAGAAAATGATGCTTATGATCCCAACAAGGGTGATACTGAAGAGGAGGAAGTATTTGTCCCACGTAAGAGGACTCGTCTTGCCTCCCGTCGGTTTGACAAGCCTCCGCAAGGGCTCCGCCGGAGTCGGAGAAATATGAAAAACGACGAATACGTCATGCGCCCAGGACAGCTTACTCCTCGATCCATGACAAAGAGAACAATGAGGCAGAGGCCAACATCTATCTCAAAGCAGTTTTCTCTATCAGGCTCGGAAGATGATCGTGAAATGATAGTTGCAGACTCTGAGGAGGAGTCCGGCTCACCTTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA002251

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA002251&oldid=39975"