BGIOSGA002293

From RiceWiki
Revision as of 10:34, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA002293| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA002293, complete gene.| tag = OsI_005...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA002293

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA002293, complete gene.

LocusTag

OsI_00586

Ensembl Transcript ID

BGIOSGA002293-TA

Ensembl Protein ID

BGIOSGA002293-PA

Length

6271

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:4173795..4180065

Sequence Coding Region

4179844..4180065,4179634..4179723),complement(4179312..4179392,4179003..4179113),complement(4178844..4178912
,4177954..4178026),complement(4177750..4177826,4176064..4176333),complement(4175625..4175975
,4175271..4175548),complement(4174774..4175124,4174645..4174701),complement(4174515..4174571
,4174375..4174416),complement(4173795..4173930

Genome Context

<gbrowseImage1> name=IndicaChromosome01:4173795..4180065 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:4173795..4180065 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGTCGGCGGCGGCGACGGCGAGGGGGCCGCGGTACGCGCCGCCAGATCCGACGCTGCCCAAGCCGTGGAGGGGGCTCATCGACGGCAACACCGGGTACCTCTACTTCTGGAACCCGGAGACCAAGGCCGTGCAGTACGACCGCCCCACGGCGCCGCCGCCCTCCTCCCCCCCGGCGCAGCAGCCTCCGGAGAGGCCTAGGAACAGCGATCCTGCTGAGTCGCAGGCGCAGGCTGGAGCGAGCCGAACGCAGAATGCTGCTCCTGCTGATGATAGGGCAAGGAATGATCATTTGAATGATCATTTCGAGCGGCACACGGAAGCGGTGGGAAGTCATGCGCAGAACGTGCCTTTCACTGAGCAAAATACTAGGAGCAACCCTTCTTCACAGCCGTGCTCTGCAGCTGGAGTATACCCTGCACAGAATGTATTTTCAGAGGCTGCCAGTGGAGACCGCACCTCACCAGAAGCGTATCGTGCTAAGCACGAGATCACTATTGTCGGAAATGAGGCTCCAGCTCCATTCATGACATTTCAGTCCACAGGTTTCCCTCCAGAGATTCTAAGGGAGGCATTCTTTGGTTTTGTTCTCTTCAACCTGGAATACAGGAAAACTCCTCCCAATGCAACACCAGTTCCTGCAGGTGAAATTGGGGTTCTGAAGAAGAGAACAGACGCCACGATGACGACCACACGCTTGACGCAGTTGGCGACAGAGTGGGTACAGCAAGCGGGATTCTCTGCACCAACTCCTATCCAAGCTCAATCATGGCCAATTGCTCTTAGGAATCGTGATATTGTAGCTGTGGCGAAGACAGGTTCCGGAAAAACACTGGGTTATCTCATTCCAGGGTTTATCCTTCTTAAGCGCCTTCAACATAATTCAAGGGATGGTCCAACGGTATTAGTGCTTTCTCCAACAAGGGAATTGGCAACACAAATCCAAGATGAAGCAAAAAAGTTTGGGAGATCATCAAGAATATCGTCTGTTTGTCTATATGGAGGTGCTCCTAAAGGTCCTCAGCTAAGAGATCTAGAGCGCGGTGCAGACATTGTGGTTGCAACTCCTGGAAGATTGAATGACATTTTAGAAATGCGAAGAGTGAGCCTACATCAAGTATCTTATCTTGTTCTTGATGAGGCTGACCGCATGCTTGATATGGGTTTTGAGCCACAAATAAGAAAAATTGTGAAACAAGTACAACCCAAACGACAGACTCTTATGTTCACTGCCACTTGGCCAAAAGAGGTGAGGAAAATAGCCTCAGATTTGCTGTCCAATCCAGTCCAAGTTAACATTGGGAACACTGATCAACTGGTTGCCAATAAGTCAATCACTCAGTATGTGGATGTTATCACACCTCCGGAGAAATCGAGGCGGCTTGATCAAATCCTAAGGTCACAGGAACCTGGATCGAAAATCATAATATTTTGCTCCACAAAGAGGATGTGTGATCAGCTGGCTCGAAACCTAGCACGGCAGTATGGTGCTTCTGCTATTCATGGTGATAAATCACAAGCCGAGAGGGATTCTGTGTTGAGTGAATTTCGAAGTGGCAGATGCCCTATTCTTGTTGCTACTGATGTGGCTGCCCGAGGCTTGGACATAAAGGATATCAGAGTTGTGGTCAACTACGATTTCCCAACAGGTGTTGAGGATTACGTCCATAGAATTGGGAGAACAGGACGGGCTGGAGCGACTGGAGTTGCCTATACATTCTTCTGTGATCAGGATTCAAAGTATGCTTCAGATCTCGTGAAGATTTTGGAGGGTGCAAACCAGTCTGTTTCGCAACAGTTGAGAGATATGGTCTCCCGTGGAGGGTATGGTGGAAGGTCACGGCGCTGGGCATCTTCAGATGACTCTTATGGTGGTCGAGGATATGATTCAGGCTATACTTCAAGGTCGACTGACAACTATAACAGTGGTTATGGCAGTCAGTCTGGGAATGGTTCTAGCTTTCATAGTAGCTTCCATAACAGCAACAGTGGCAATCAGTTTGGCGATACTTCTGGCTTCCAAACCAGCTTTCATAACAGCAGCAGCAACAATCAAACCAGTGACAATCCAAGCTTTCATGCCAGCAACAACGATCAACCTGGTGATGGTCTCAGCTTTCATGCCAGGTTCTATAGCTCTTCTCGAGGCAGCGATCAGAGCAGAACAAACAATGCTGGCTTTCGTGATAGAAGTAGGAGTCCTCCAAGCAATCGCAACCATGAAGATCCTGGGTCCAAGGCTGTTGGTGTCTCCAACTGGTAA</cdnaseq>

Protein Sequence

<aaseq>MASAAATARGPRYAPPDPTLPKPWRGLIDGNTGYLYFWNPETKAVQYDRPTAPPPSSPPAQQPPERPRNSDPAESQAQAGASRTQNAAPADDRARNDHLNDHFERHTEAVGSHAQNVPFTEQNTRSNPSSQPCSAAGVYPAQNVFSEAASGDRTSPEAYRAKHEITIVGNEAPAPFMTFQSTGFPPEILREAFFGFVLFNLEYRKTPPNATPVPAGEIGVLKKRTDATMTTTRLTQLATEWVQQAGFSAPTPIQAQSWPIALRNRDIVAVAKTGSGKTLGYLIPGFILLKRLQHNSRDGPTVLVLSPTRELATQIQDEAKKFGRSSRISSVCLYGGAPKGPQLRDLERGADIVVATPGRLNDILEMRRVSLHQVSYLVLDEADRMLDMGFEPQIRKIVKQVQPKRQTLMFTATWPKEVRKIASDLLSNPVQVNIGNTDQLVANKSITQYVDVITPPEKSRRLDQILRSQEPGSKIIIFCSTKRMCDQLARNLARQYGASAIHGDKSQAERDSVLSEFRSGRCPILVATDVAARGLDIKDIRVVVNYDFPTGVEDYVHRIGRTGRAGATGVAYTFFCDQDSKYASDLVKILEGANQSVSQQLRDMVSRGGYGGRSRRWASSDDSYGGRGYDSGYTSRSTDNYNSGYGSQSGNGSSFHSSFHNSNSGNQFGDTSGFQTSFHNSSSNNQTSDNPSFHASNNDQPGDGLSFHARFYSSSRGSDQSRTNNAGFRDRSRSPPSNRNHEDPGSKAVGVSNW</aaseq>

Gene Sequence

<dnaseqindica>1..222#343..432#674..754#953..1063#1154..1222#2040..2112#2240..2316#3733..4002#4091..4441#4518..4795#4942..5292#5365..5421#5495..5551#5650..5691#6136..6271#ATGGCGTCGGCGGCGGCGACGGCGAGGGGGCCGCGGTACGCGCCGCCAGATCCGACGCTGCCCAAGCCGTGGAGGGGGCTCATCGACGGCAACACCGGGTACCTCTACTTCTGGAACCCGGAGACCAAGGCCGTGCAGTACGACCGCCCCACGGCGCCGCCGCCCTCCTCCCCCCCGGCGCAGCAGCCTCCGGAGAGGCCTAGGAACAGCGATCCTGCTGAGGTAGCCCATCGATGATCCCCCCTCCTTTTTTTTTTTGATTCATTTCGTCCTCGTTGCTCTCGTTGCCTGGGTATAAATGTCAGCATGGAGGTTTCCTTATATTGATTTGTTGTTCCTCAGTCGCAGGCGCAGGCTGGAGCGAGCCGAACGCAGAATGCTGCTCCTGCTGATGATAGGGCAAGGAATGATCATTTGAATGATCATTTCGAGGTGCGCTTATCGTTGTTCTCCTATCGTTCACCTGTTAATGCTGCATTGCTGCATCAAGTAATTTCGATGCTCCGTACTGCGTTTGCATCATCATGGCATATGGTCTAGAATAGGATTGCCGGTAACTAGAAGCAGAAAGTTAGGGTTTTCTTTTGGCCTGTGTAACTAACTGCCTTCAGTATTCGCAATGGATAGGGTAGCTTATGCAACGGTTTGTCGTATTAATGCTTCTATTTTTCAGCGGCACACGGAAGCGGTGGGAAGTCATGCGCAGAACGTGCCTTTCACTGAGCAAAATACTAGGAGCAACCCTTCTTCACAGGTGACACGTGTTACAACTTACACGTTTTATAACGTTCATTCTTCCATAAATACAAAATGAGTTGTACGGTAGCGTAGTAGAGTAATGATGCAGTGAAAAACCAAATATGCAGTCATACCTAAAGGGTGATTACAATTATTGCAGTGTTTTGTTTCACTCCTAGATGTCATTAAATAAAATGTTTTCCTATTTTTCCAGCCGTGCTCTGCAGCTGGAGTATACCCTGCACAGAATGTATTTTCAGAGGCTGCCAGTGGAGACCGCACCTCACCAGAAGCGTATCGTGCTAAGCACGAGATCACTATTGTCGTATGTGTTCAACTGCTTTTACAATCTCTTAAATCACTATTGGGCGCTACATACTATGTTGCTCAGTTATACATTTCTTTCATTTACTAGGGAAATGAGGCTCCAGCTCCATTCATGACATTTCAGTCCACAGGTTTCCCTCCAGAGATTCTAAGGGAGGTAAGTGCACACAATTTACATGACTATTTAATGCATTTTCTTGTATCCTTCTCGAAAGAAATTAGGAGGTCATTGTGCGTTCATACTACGTATGTGATAACTACGCTGGATGTTCATCTCAGCAGGCTCTTCAAGTCAACAATCTATGTCAAGGTTTGACCTGTTTGTTGTCTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCAGAACTTAACTAACATAGGATAAGACTGTGGATCTTCTGCTGTGCAGATGTAGCGCACTTGATAATGTATGTCTGGTGTTAGTCGTTTGTCAGACCTGGGGGCTCGGACTTCCTTGCTATCTATACCTGCTACCGCTATGATCATGTGGAAACAAACCATCTGAGGCATGCATTTTGGACGAAAGCATGCACTCTTAATCCTTATATGACTTGTAGATTATTTACCCCAGCGTCGTTTACATTGAACTATTTCCATGTTCTGAATGTTCATGCGGTGCCCATGTATGTATTACCCCATTTGCCGTCAGTATTCCTCTTCGAAGCGAAGTTAGTTTCAAGTCTCAAGCGTACACTCAAGTGATAGCTTTATTGATTTTGCGCCTGGACACTAATGAATTTCTCTCGAGATCTGAGAATATTCAGCAATGTTCTTACAATTTTGTGAAAAATGAGACTGTAGGTCGTGTAGTACAATCGGTGCTAAAACCGAACCCAACTCATTTTCTTCGTCGATGTACAAGCCTAATCTATGTATCCCAAATCAAAACAAAAACTGCGAGAACTGTAATTAAGCGTGTCCTCTCTTCTCAGGCATTCTTTGGTTTTGTTCTCTTCAACCTGGAATACAGGAAAACTCCTCCCAATGCAACACCAGTTCCTGCAGGTTGGCACAAAAAGAAATCCAAACAAAAATTAGTTAAACACAAGAACAGCAAAACTTTCAGCTGCTGTTAAGTTCTGAAGAAAATCAGCCAGTTTTTTGAGAGTTACAGTACCTAGTGCATTGACAGGTGAAATTGGGGTTCTGAAGAAGAGAACAGACGCCACGATGACGACCACACGCTTGACGCAGTTGGCGACAGAGTGGGTGACAGGTGACACTCTGGCCAGGATCAAGTAGGAGAGCTGCCAATTTCAAGAAAGAACACAGAATGATCCTTTTGTTTACAGGTCAATGAATCATCAAGCACAAATCTTTCTTGAGCCAAAGAAGAGGTGACTGTTTCCTCAGTCCTCACCTTCTGGTAGACATGGAAGCAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCCCCGCTTTCGCGCACACCGGAACGAATAATCAAACACAAAGAGGAGGGAGCACGAACGCCACTCAGATTTGAAGACCTGCCTATGCAGTATGCATTGGTGCATTGCTGGTTACTCCCTCCATCCTATATTAAAAGCAATTATAAATTTCAGTGTATATTGTTTGACCGTTGTCTTATTTAATGTTTTTATTAATTTTTTTTATTAGATAATAAAATATGAATAGTATTTTATGTTTCACTTAATTTTAAAAGTTTTTTTATAAATTTTTAAATAAGAGGGATTGTCAAATGTTAAATATGAAAACTTAACTGTACTTAAAATAGGACGGAGGATTAGTCCGTACTCGTAGTGCTTACTGTCACCATCAGAGTGAGACGCCATTGATGACCAATAATAACACGCCTTATTAGTAGGAGTACGTATCAACCCAACTACTTGTTGTCATACTGTTTGTATTTAGTGCAGTGCCTTTATGTTTCTTTCTAAGTAAAAAAGGTGAGCAATTGAAACCATGAGATAAGAATAAGAATCGTGCAGGGTGGTGGTGGCTGCCAAGGACAAAAAAGCGATAAACTTTGATAGAAATTGTTTGTGAAACTGACCCTGATGAGAGGAGAGAGAGAGAGAAATTAGTACTTCCTCCGTTTTATATTATAAGACTTTCTAGCATTACCCACATTTATATATATATTAATGAATCTAGAGATATATATGTGTCTAGATTCATTAACATCTATATACATATAAGATAATGCTATAAAGTCTTATAATATAAAACGGAGGGAGTAGTAGTGAATAATGGCCTTCCTTCTCTTTCTGCATAACTTTAATGATTTTTGTGATTACTATACTATTTAAGAGTATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGTTTGTTGTCTTGTCCAGCCTTCTGTGTATTGAAATAGTTTTCTTATATGTTATTTTTGACCTCTGGCTGCAAGATATTGGATTTGGTTTTTCTATAGCTCAAAAATCGTATGCGAAACCTCGGTCTCCTTTTTCATTAGTACATTTACTGATTTAGGCTTATGGTTACACATCTGTCGGATTCACATTTCACTCAATTCTGTCATGGACTGTGTGTTTCTGTAGGTACAGCAAGCGGGATTCTCTGCACCAACTCCTATCCAAGCTCAATCATGGCCAATTGCTCTTAGGAATCGTGATATTGTAGCTGTGGCGAAGACAGGTTCCGGAAAAACACTGGGTTATCTCATTCCAGGGTTTATCCTTCTTAAGCGCCTTCAACATAATTCAAGGGATGGTCCAACGGTATTAGTGCTTTCTCCAACAAGGGAATTGGCAACACAAATCCAAGATGAAGCAAAAAAGTTTGGGAGATCATCAAGAATATCGTCTGTTGTACGTTCCTCCTATCTTTTACTCATCTGTTATGCGTTTTTGTGTCCTATAAAGTTGATGTCATCTAATTGTACCTTTTTATTTGAAGTGTCTATATGGAGGTGCTCCTAAAGGTCCTCAGCTAAGAGATCTAGAGCGCGGTGCAGACATTGTGGTTGCAACTCCTGGAAGATTGAATGACATTTTAGAAATGCGAAGAGTGAGCCTACATCAAGTATCTTATCTTGTTCTTGATGAGGCTGACCGCATGCTTGATATGGGTTTTGAGCCACAAATAAGAAAAATTGTGAAACAAGTACAACCCAAACGACAGACTCTTATGTTCACTGCCACTTGGCCAAAAGAGGTGAGGAAAATAGCCTCAGATTTGCTGTCCAATCCAGTCCAAGTTAACATTGGGAACACTGATCAACTGGTTGCCAATAAGTCAATCACTCAGGTAATGAAAATGGTGCTTTCTTTTTGTTGATCAGACTTTGTTTCGTTATTTTGAAGCAGATTGTTATATGTTGCAGTATGTGGATGTTATCACACCTCCGGAGAAATCGAGGCGGCTTGATCAAATCCTAAGGTCACAGGAACCTGGATCGAAAATCATAATATTTTGCTCCACAAAGAGGATGTGTGATCAGCTGGCTCGAAACCTAGCACGGCAGTATGGTGCTTCTGCTATTCATGGTGATAAATCACAAGCCGAGAGGGATTCTGTGTTGAGTGAATTTCGAAGTGGCAGATGCCCTATTCTTGTTGCTACTGATGTGGCTGCCCGAGGCTTGGACATAAAGGATATCAGGTTGGGACTTCTTTGCAACTTGTAGAGCTGAGATCTCATTGTAGGCCATAGCATAAAGATGATGTCCCTGTGCATGTTGTAACGACTAATGACCTGTAATTCTTCAAATGGTATTCACTGACAATTCTCTCATATTCCTGTTACAGAGTTGTGGTCAACTACGATTTCCCAACAGGTGTTGAGGATTACGTCCATAGAATTGGGAGAACAGGACGGGCTGGAGCGACTGGAGTTGCCTATACATTCTTCTGTGATCAGGATTCAAAGTATGCTTCAGATCTCGTGAAGATTTTGGAGGGTGCAAACCAGTCTGTTTCGCAACAGTTGAGAGATATGGTCTCCCGTGGAGGGTATGGTGGAAGGTCACGGCGCTGGGCATCTTCAGATGACTCTTATGGTGGTCGAGGATATGATTCAGGCTATACTTCAAGGTCGACTGACAACTATAACAGTGGTTATGGCAGTCAGTCTGGGAATGGTTCTAGCTTTCATAGTAGGTATGTATCAGTTCCTATTTGAATCCTGCCTTTGAGCTTAATTAGCACCTACATGATGAATTATCTATGCAGCTTCCATAACAGCAACAGTGGCAATCAGTTTGGCGATACTTCTGGCTTCCAAACCAGGTACAAAACAAATCTCTATCCTACTACATGTCATCTCAAGCACATGTATACCTGATGAGCCATCATTATACAGCTTTCATAACAGCAGCAGCAACAATCAAACCAGTGACAATCCAAGCTTTCATGCCAGGTTAGTTGAAAGTCTGCTACCTGTTACTTTTTTTTTGTCTTGTGTCCAATCCTTGAGTGAATGACCGATTTGCCGATTTTGGCATCTTATAATAGCAGCAACAACGATCAACCTGGTGATGGTCTCAGCTTTCATGCCAGGTATGCCTGAATTTCATTTGACACAGACACATATTTGGAACCTTGAAGGACCTGCTTGGCTAGGATTTCAATACAAATCTGTAGGAAGTAAATCCCCAACAAAAAAAAAAACAGAACAAATCGTCATCATCTTAAACCTTCACCTGTTTCCATGCATACTGAGTTACTTGAATTCATGAAGTGAATCAGAAGAGCTTAGATTCTCTGATACTGCTGTGCTATTAAGTGGCCCGGGTAATAGTTGGGTAGCTGAATGACCTATATTATCTATGAGCTGACACCAACTGTCTAAACAAGAGGGAGGCATAACTTTCTGCTCCTTTTGTTTCTTTCTGTTGGCAATGACAACTAATATTTCTTTTTTAGGTAGTTTATATCCCATTAGCAATGTGATTTCATACTTAATTTATGTAGCTTCATTGATCGTCTTCATGCAAATGGCAGGTTCTATAGCTCTTCTCGAGGCAGCGATCAGAGCAGAACAAACAATGCTGGCTTTCGTGATAGAAGTAGGAGTCCTCCAAGCAATCGCAACCATGAAGATCCTGGGTCCAAGGCTGTTGGTGTCTCCAACTGGTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA002293