BGIOSGA002312

From RiceWiki
Revision as of 10:34, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA002312| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA002312, complete gene.| tag = P0028E1...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA002312

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA002312, complete gene.

LocusTag

P0028E10.14

Ensembl Transcript ID

BGIOSGA002312-TA

Ensembl Protein ID

BGIOSGA002312-PA

Length

1844

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:3906132..3907975

Sequence Coding Region

3907870..3907975,3906132..3907324

Genome Context

<gbrowseImage1> name=IndicaChromosome01:3906132..3907975 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:3906132..3907975 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGAAGCCACCTTTGGAGAGGAACCCTACCAAGAAGCGCCACTCGTGGTGGTGGGATAGTCACATTAGCCCTAAGAACTCTAAATGGCTTGCAGAAAATCTTGAAGAAATGGACAAGCAAGTGAAGGAAATGCTGCAGCTTATTGAGGAGGATGGCGATTCCTTCGCGAAGAAAGCGCAGATGTACTACCAGAGGCGTCCAATGCTCATCACCCATGTTGAAAATTTCTACCGGATGTACCGTGCTCTAGCTGAGCGATACGACAATGTCACTGGTGAATTGCGCAAGAACATCCCTACAAGGCTGCAGTATCAGGGATCCTTGGCAGGTTCAGACTCTGAGCTGCAGAGGTCACCCTCACCATCTCCTGAACCACAGAAGTCCTGGACAAGGGAGCAGAGCCCAAGGGCCGCCGGTTTCGACGTCTTCCTGTCCAACAAGAGCAATGGCTCACCCTCACCGGCCTCAAGGAAGGAGCCTGAGGATTTGGCTTCACAGTCAGAATCTGATGCAAAGTCTGAAGATGGTGAGGATGATGGCATTGCCTACACATTGCACCAGAGAGTTCTTGAGCTTGAGGATGAGCTCAACACCGTGAACCAGAAACTGCACGACGCAAATGAAAAACTTGAGGTTCTGGAAGAGAAGAGCTTGAGGTGCCATTGTGATTCTAAAGAAAATGGAAACGGTGCTGATCAAAGTGCAATAAATGAGAAGCTACAGTCTTCACAAGAGGAGATTAACAATCTCAAAAACAGCCTTGAAGTTTTGTCGGAAGAGCACTCTAGGCTGTTGGGACAGAACAAGAAACTGGAGGCTGAAATTGTCAATCTGAAGGAAGAAATTGCTTCAGATAGACAGCAATATGAAGAGAAGCTCTCTCGTAGTGACGCTGAAATTGACAAGTGCAGGCAAGAACTTGCTGATGCTTCTGAGAAGTTGCTGCAAGAGAAGTTGAGCAACAGTTCGGTGACAGCTGAGCTGCAAGAAACGATTGAAAGCATCAGGATCAAACTTGAAGAAGTTTCTGAGGAGAAATTACTTGTTGAGAACAAGTTTAAGCAGCTGGAGGAAGCAAACTCTGAAGCTGAAAAGTACAACCAAGAACTGTCACATGCTACCGAGAAGCTTTCAGAGGAGAAGTTCAGACACGAGGCTGAGATTCTTGCATTGAATCAGGCCATTGAAAATCTGAAATCCAAACTGGAGAGCATTGCTAAGGAGAAATCGTTGCTTAAATCATGGTTTGCTGACCTAGAGCAAGTCGTGGAGCGAGGAAGGAGAATTTTCCCCGAATAG</cdnaseq>

Protein Sequence

<aaseq>MKPPLERNPTKKRHSWWWDSHISPKNSKWLAENLEEMDKQVKEMLQLIEEDGDSFAKKAQMYYQRRPMLITHVENFYRMYRALAERYDNVTGELRKNIPTRLQYQGSLAGSDSELQRSPSPSPEPQKSWTREQSPRAAGFDVFLSNKSNGSPSPASRKEPEDLASQSESDAKSEDGEDDGIAYTLHQRVLELEDELNTVNQKLHDANEKLEVLEEKSLRCHCDSKENGNGADQSAINEKLQSSQEEINNLKNSLEVLSEEHSRLLGQNKKLEAEIVNLKEEIASDRQQYEEKLSRSDAEIDKCRQELADASEKLLQEKLSNSSVTAELQETIESIRIKLEEVSEEKLLVENKFKQLEEANSEAEKYNQELSHATEKLSEEKFRHEAEILALNQAIENLKSKLESIAKEKSLLKSWFADLEQVVERGRRIFPE</aaseq>

Gene Sequence

<dnaseqindica>1..106#652..1844#ATGAAGCCACCTTTGGAGAGGAACCCTACCAAGAAGCGCCACTCGTGGTGGTGGGATAGTCACATTAGCCCTAAGAACTCTAAATGGCTTGCAGAAAATCTTGAAGGTGAGCTGAAACTTTTACAGGGAAAATAATGAGATTGCATTGTCTTAGTACTCCTACTGTTATGCGTTTTTTTTGTGGAGATACTACTCATATCAATGCATGTCCAGGTACAGTACCATTTACCAATGTTTACTGCACTGAGATGAACATAAATGAGCAATAAACCAGTGGAAGTACATCATCAATTTACTTGTTTACTTAAGTCAAATGCTCTTGACGCACTCATGGTATCTGATGGTACTGTAGCATTAACTGATTGTACATCGAACTAATGAGCAGGATGGGGTAGTTGAGTAAATGGATTCATGAATATAACTAGAGATGTAGTAGACATTCTTGATTGTTCATTGTTCGTATATTCGTGCTTCCATAGACAAGTAACAGAAATGATGCACATATTTTCTTTATTATAAATTGTCAGTGAAGTAAAAGTAATACTGCTGATATTTTTCCTTACACTTTCTGCTATTCTGTACGTTGTTACTATTGTTCATATATACTGTAGCCTTATCTAACTCTCCCTGAACCTTTTTTTTTTTTTGCAGAAATGGACAAGCAAGTGAAGGAAATGCTGCAGCTTATTGAGGAGGATGGCGATTCCTTCGCGAAGAAAGCGCAGATGTACTACCAGAGGCGTCCAATGCTCATCACCCATGTTGAAAATTTCTACCGGATGTACCGTGCTCTAGCTGAGCGATACGACAATGTCACTGGTGAATTGCGCAAGAACATCCCTACAAGGCTGCAGTATCAGGGATCCTTGGCAGGTTCAGACTCTGAGCTGCAGAGGTCACCCTCACCATCTCCTGAACCACAGAAGTCCTGGACAAGGGAGCAGAGCCCAAGGGCCGCCGGTTTCGACGTCTTCCTGTCCAACAAGAGCAATGGCTCACCCTCACCGGCCTCAAGGAAGGAGCCTGAGGATTTGGCTTCACAGTCAGAATCTGATGCAAAGTCTGAAGATGGTGAGGATGATGGCATTGCCTACACATTGCACCAGAGAGTTCTTGAGCTTGAGGATGAGCTCAACACCGTGAACCAGAAACTGCACGACGCAAATGAAAAACTTGAGGTTCTGGAAGAGAAGAGCTTGAGGTGCCATTGTGATTCTAAAGAAAATGGAAACGGTGCTGATCAAAGTGCAATAAATGAGAAGCTACAGTCTTCACAAGAGGAGATTAACAATCTCAAAAACAGCCTTGAAGTTTTGTCGGAAGAGCACTCTAGGCTGTTGGGACAGAACAAGAAACTGGAGGCTGAAATTGTCAATCTGAAGGAAGAAATTGCTTCAGATAGACAGCAATATGAAGAGAAGCTCTCTCGTAGTGACGCTGAAATTGACAAGTGCAGGCAAGAACTTGCTGATGCTTCTGAGAAGTTGCTGCAAGAGAAGTTGAGCAACAGTTCGGTGACAGCTGAGCTGCAAGAAACGATTGAAAGCATCAGGATCAAACTTGAAGAAGTTTCTGAGGAGAAATTACTTGTTGAGAACAAGTTTAAGCAGCTGGAGGAAGCAAACTCTGAAGCTGAAAAGTACAACCAAGAACTGTCACATGCTACCGAGAAGCTTTCAGAGGAGAAGTTCAGACACGAGGCTGAGATTCTTGCATTGAATCAGGCCATTGAAAATCTGAAATCCAAACTGGAGAGCATTGCTAAGGAGAAATCGTTGCTTAAATCATGGTTTGCTGACCTAGAGCAAGTCGTGGAGCGAGGAAGGAGAATTTTCCCCGAATAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA002312