BGIOSGA002322

From RiceWiki
Revision as of 10:34, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA002322| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA002322, complete gene.| tag = OS01G01...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA002322

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA002322, complete gene.

LocusTag

OS01G0165800

Ensembl Transcript ID

BGIOSGA002322-TA

Ensembl Protein ID

BGIOSGA002322-PA

Length

4294

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:3817882..3822175

Sequence Coding Region

3821381..3822175,3821159..3821282),complement(3821010..3821078,3820801..3820890),complement(3820598..3820709
,3820348..3820379),complement(3819628..3819659,3819503..3819544),complement(3819244..3819340
,3819098..3819159),complement(3818517..3819002,3818258..3818445),complement(3817882..3818149

Genome Context

<gbrowseImage1> name=IndicaChromosome01:3817882..3822175 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:3817882..3822175 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGGCCGTGCTGACGGACGATTTCCTGCTCCGATTCATCCTGAAGTGTCTGTGTCCGAGGGATGTGGTCCGCGCGGCCCTTGCCAACAAGAGCTGGCGGCGCGCGGCGGCCCTCGCCGTCCCCCGCACACCGCCGCTCGTCGGCTACCTCCTGCACCCGGAGAAAATCCGGTCGGCCCAGATCCCCCCCGTCTTCGTCCCCAGCGACGCCTCGTTCCCGCGCCTCTCCCTCCCCTTGGCTCCCGACGACCTCTCCGGTGTGTCCGTGCACGATGTCCACCACGGCCTGGTCCTTCTACTACCCTGCGAGCTTCCCGACATTCTCCTGCTCCGCATACTGGTGCTCGATCCGGCATCCGGACGCCGGGCTCTGCTCCCTCCTCCGCCGCGCGACGCTCTGCCCGACGACCAGTGGCGCCAAACCCGGCGCATCATCGGCGCCGCGGTGCTCTCGCGCGCGCATCCCAGTAGGCTGCACTTCCAGGCGGTCTGCGTCACCATCGACGACGACCGCCCTCGCGCCTGGGTCGCCTTCGTCAACGGCGAGGATTGCCTCTGGTGCATCCTTCCACGCTCCAAGCATGTTAGGGTTCTTCGTTTTGATCTCAGCATGTGCTGTGCCGCCCACGATCAGGGACAGATCTGCTGGATCGCCTCCAACTCCAACCAAGTGCTCGCACTGGAACCTTCATCTTTGGAGTTTCAGTTCATAACTTCTTCTCCAGCTGCTGTGCCAGTTGATGTATTTGCATATTTTCTGTCTTGGCCACCTGCATTTCTTAGCCTGCTCGAGGAGAATGATGATGCGCTAACTGACAGCTTGATGAGTCTTATTAAAATAGTCTTCTACAATATATGCTACGTGAGAGGATTGTTTTCTAAGGAGTTCTTCTCTGATATGCCTTTTCTACCGACAGGGATGCAGATAAAAAAGCTTACGCCGATGGATGACGAGTCCCAAAGGCTTGTTGATTGGCTAGAAAAAGGTGTTTATGATGCTCTGAAAAAGAAGTTCCTCAAAACTATCATCTTCTCTATCTATGATGAGAAGGGCCCTCTGTTGGAGGAGTATTGCCTATCATTCACATACTTCAGCGAAATTACAATCGACTTACGGCTGACGGGATCCACTCAAAGTATATGGACAATGAGGTCCGATGCAGCTGAGAGCTTTGTTAATCAAATTTGGATTATAATACAACCTAGCCCAGCTTCGACTGTCATGAGTGGCTTGGAAAAAATTCCGGAGGAGCGCATCATCATGATGAGGTTGTTATACTTTGATGATCAAACACCTCTGGACTATGAACCTCCTTTTTTTGAGAGTTATGATGATATGAGAAAACGTTGTCCGCTCCCACTACATACTACTTTATCAGATTACTCACAAGATTTGATCAGTTTACATGATGTAAAATCAGTGCTCTCCAACAATCCCTTTCATTCCAACAAGGTTTTTGCAATGGACCCAAAAAGCAAAATCCAACAAGGGCACCTTTTTTGCATTACTAAGAAAGATGTCCACTTCTATTTTGATTCTGGTGCTAGCCACCACATGTGTGATGATGATAAACTCTTCAAAAATCTCCATGAGGTTCCTACTGAACATCAGGATACTGTTTATGATGCTAGTGGCGACCCAGTGTGCCTGCACATGTCCGGTGAAGTGATATATGATCAAATCAAATTGAGTCCAGTATTCTACCACTCTACTCTCAAATTTAAAGTTATATCTCTTGGTGAACTGGATGATTCTAACACCCTCATGTATGTTGGAGATAAAAGGATTAAAATCTTTGATGTAAATAAAGGTGAAATGATCGGCGAGGGATATCTCCACGAAAAGAGAAATGAATATATAGTTCGAAGCATCATATGCAGAAAAGAAGAACAACAAGCTATAACCAGATCGATGTTGTCCTCAACGGCAATTGATGAGAAAAAATTGTGGGTAGTAGATTCTCTATGCTGCAATCACATGACTGGTATAAAGGGACTTCTATCTGATACAAGACACGAGGTACAGTCATTTGTTACCCCCAGAGGTGCATTTTTAAGCTCAAAAATTGGAAATGTGAAGACTAGTACAGTAACACTGTTTAATGTGTTGTACTGTAAGGGACTGAGACAGAATCTCATATCCGAAGGTCAATTAGACCGTGACGGCTATTCATGTACAAGGCTTGCTCACAAATGCAAGATTCAGTGGAGAGGGACTCAAGAAGTTGTTGGTCTAGCTCATCAGGACGATAATGCACTGTATTACGTGGATTATTTTCACTATGTCAGCGACCCATCTTTGAAGCATACGAGGAATGATGGAGAATGCATACAGAAGTTGAAGCGTCCGCGGCAAGATGGATCCTCTCCATCTAGTAGGAAAAGGACTGCGTAA</cdnaseq>

Protein Sequence

<aaseq>MAAVLTDDFLLRFILKCLCPRDVVRAALANKSWRRAAALAVPRTPPLVGYLLHPEKIRSAQIPPVFVPSDASFPRLSLPLAPDDLSGVSVHDVHHGLVLLLPCELPDILLLRILVLDPASGRRALLPPPPRDALPDDQWRQTRRIIGAAVLSRAHPSRLHFQAVCVTIDDDRPRAWVAFVNGEDCLWCILPRSKHVRVLRFDLSMCCAAHDQGQICWIASNSNQVLALEPSSLEFQFITSSPAAVPVDVFAYFLSWPPAFLSLLEENDDALTDSLMSLIKIVFYNICYVRGLFSKEFFSDMPFLPTGMQIKKLTPMDDESQRLVDWLEKGVYDALKKKFLKTIIFSIYDEKGPLLEEYCLSFTYFSEITIDLRLTGSTQSIWTMRSDAAESFVNQIWIIIQPSPASTVMSGLEKIPEERIIMMRLLYFDDQTPLDYEPPFFESYDDMRKRCPLPLHTTLSDYSQDLISLHDVKSVLSNNPFHSNKVFAMDPKSKIQQGHLFCITKKDVHFYFDSGASHHMCDDDKLFKNLHEVPTEHQDTVYDASGDPVCLHMSGEVIYDQIKLSPVFYHSTLKFKVISLGELDDSNTLMYVGDKRIKIFDVNKGEMIGEGYLHEKRNEYIVRSIICRKEEQQAITRSMLSSTAIDEKKLWVVDSLCCNHMTGIKGLLSDTRHEVQSFVTPRGAFLSSKIGNVKTSTVTLFNVLYCKGLRQNLISEGQLDRDGYSCTRLAHKCKIQWRGTQEVVGLAHQDDNALYYVDYFHYVSDPSLKHTRNDGECIQKLKRPRQDGSSPSSRKRTA</aaseq>

Gene Sequence

<dnaseqindica>1..795#894..1017#1098..1166#1286..1375#1467..1578#1797..1828#2517..2548#2632..2673#2836..2932#3017..3078#3174..3659#3731..3918#4027..4294#ATGGCGGCCGTGCTGACGGACGATTTCCTGCTCCGATTCATCCTGAAGTGTCTGTGTCCGAGGGATGTGGTCCGCGCGGCCCTTGCCAACAAGAGCTGGCGGCGCGCGGCGGCCCTCGCCGTCCCCCGCACACCGCCGCTCGTCGGCTACCTCCTGCACCCGGAGAAAATCCGGTCGGCCCAGATCCCCCCCGTCTTCGTCCCCAGCGACGCCTCGTTCCCGCGCCTCTCCCTCCCCTTGGCTCCCGACGACCTCTCCGGTGTGTCCGTGCACGATGTCCACCACGGCCTGGTCCTTCTACTACCCTGCGAGCTTCCCGACATTCTCCTGCTCCGCATACTGGTGCTCGATCCGGCATCCGGACGCCGGGCTCTGCTCCCTCCTCCGCCGCGCGACGCTCTGCCCGACGACCAGTGGCGCCAAACCCGGCGCATCATCGGCGCCGCGGTGCTCTCGCGCGCGCATCCCAGTAGGCTGCACTTCCAGGCGGTCTGCGTCACCATCGACGACGACCGCCCTCGCGCCTGGGTCGCCTTCGTCAACGGCGAGGATTGCCTCTGGTGCATCCTTCCACGCTCCAAGCATGTTAGGGTTCTTCGTTTTGATCTCAGCATGTGCTGTGCCGCCCACGATCAGGGACAGATCTGCTGGATCGCCTCCAACTCCAACCAAGTGCTCGCACTGGAACCTTCATCTTTGGAGTTTCAGTTCATAACTTCTTCTCCAGCTGCTGTGCCAGTTGATGTATTTGCATATTTTCTGTCTTGGCCACCTGCATTTCTTAGCCTGCTCGAGGTTGTTTTCTCACGGTTCCAACCTATTTAATAATTTAGATTTGTCCATGCAACAATTGTGTTTGCTAAACTAATTTATTGTTGCTAAACTTATTTTAGGAGAATGATGATGCGCTAACTGACAGCTTGATGAGTCTTATTAAAATAGTCTTCTACAATATATGCTACGTGAGAGGATTGTTTTCTAAGGAGTTCTTCTCTGATATGCCTTTTCTACCGACAGGTTGAAATCTTATTTGAATCTATACCTATTCTTTTGTCACACTTGTAGCAATGAACTGATAAGTTTGTTTCTTATGACAGGGATGCAGATAAAAAAGCTTACGCCGATGGATGACGAGTCCCAAAGGCTTGTTGATTGGCTAGAAAAAGGTGAAAAGTACCCGACATAGCATGAGCTCCTTAAATACTTTGCTTGTCCAGCATATGGTTATGTGTGAAAAAACAATTTCTTATCTGTCCATTTGATTAACTTTTGGTATCAAACTTAGGTGTTTATGATGCTCTGAAAAAGAAGTTCCTCAAAACTATCATCTTCTCTATCTATGATGAGAAGGGCCCTCTGTTGGAGGAGTATTGCCGTAAGTTTCTGCTAGAGTGGGGCTTTGGCTTACTAATAGCATATCAAGCTGACATGGCTAATACTATCACACATTTACATTTCTTTTGCAGTATCATTCACATACTTCAGCGAAATTACAATCGACTTACGGCTGACGGGATCCACTCAAAGTATATGGACAATGAGGTCCGATGCAGCTGAGAGCTTTGTTAATCAAATTTGGTGAGCCTCTTATACTTCTACTAGAACTTCATGGTTCGGACAACACGACATGTACAGCAGTGAAACAGGTCCTGAATGGGGCAACATGTGAATGAAATGAACCAGATTTTGAATAGGGCAAAATGTGAACAAAGTGACATGCATAACTTGAGGTGCTAGAGATGAACATCCTTTTTGCAGTAGAACTGAACTTTCTTGATCTTTCATTCCATACTCAGGATTATAATACAACCTAGCCCAGCTTCGACTGGTATTTCAATATGCAATCAAAACCAACTAACTGGTTGATCAGCAAAGTAAAGCCTTGTTTACATATTAAAAATGCATGTGGGAGTATTGTTTACATAATTGGTTAAGGATATTCTTCTAGATTACTATTTCACCTCAAAAAATTCTTCTAGATTAGTATGACCAAAAGGCGCGTGCGAGAAAATTGTCATGAATAAGGAGACCCTTCTGTATTTCCAGTGACCTATGTGGCTATTTCAAAGTGAAATGTATTATGCCTTTTTGTTCAACTGAATTGAGTGAACCATGGGTGTTTTCTCCAGTAGTAATATTAACCTGAAAAATATTTTATATCTATCACTGCTGAATAATTTAGTTCATACACTAGTAGCTTCCACTGAAAAGTACTCTACCCATATGCTAGTACCTGCATGTTAGTTCATATGGGCATCATAGCAAACATGATATATGAATGCAGTATTACCACCCTTGAATTGCAAATAGCATTTCAAACACAGTTATGGAGCAGATTATGGAATAAAAAAGAAAGAACAAAAGAGAAGCAGGGAAAGCATGCTAGTTCAGATGCCCCTTGCTAGTTATGGAGTAATGGCTGCAATATTACAGTTTTTAAATGGATGTGCCTTGACATCGCCATGGTTTCCTTTTCAAGATTTCAGCATGTTCATTGGTCCAAAAATGCATCTCAGTCATGAGTGGCTTGGAAAAAATTCCGGAGGAGGTAAATTTGTTTCATATCATTTGATTTTTGTCAACCCAAGGCTTGACATGCTAACTTGATTCTGTGGATTTTTCTGTATTCAGCGCATCATCATGATGAGGTTGTTATACTTTGATGATCAAACAGTGAGTGCATCCTCTCTATTCTAGTTATAGTTATATATATTGATCCATCCTGAAATTCTGAGCTGCTACACTGATGTACTATCTCTATGCACTGACAGAAAATTGTTCCATACAACTTTGTTACTGGAAACTAACACAACCTTCTTTTCCCCCTATTGTCAGCCTCTGGACTATGAACCTCCTTTTTTTGAGAGTTATGATGATATGAGAAAACGTTGTCCGCTCCCACTACATACTACTTTATCAGATTACTCACAAGGTAATTGTATGAGTCATTTTAAACTAGTTCTGAACATTGGTCTCTATAGCCCTGAGTAAATGTCTTTTTGTGCTCATTATTCAGATTTGATCAGTTTACATGATGTAAAATCAGTGCTCTCCAACAATCCCTTTCATTCCAACAAGGTGATAATTTATCTCTATTTATATTCTTATGTTCAATGCATGCACCTTTCAATTTCTTTTCGCCTGAACAACCTCTGCCGTCTCATTTTAATTAGGTTTTTGCAATGGACCCAAAAAGCAAAATCCAACAAGGGCACCTTTTTTGCATTACTAAGAAAGATGTCCACTTCTATTTTGATTCTGGTGCTAGCCACCACATGTGTGATGATGATAAACTCTTCAAAAATCTCCATGAGGTTCCTACTGAACATCAGGATACTGTTTATGATGCTAGTGGCGACCCAGTGTGCCTGCACATGTCCGGTGAAGTGATATATGATCAAATCAAATTGAGTCCAGTATTCTACCACTCTACTCTCAAATTTAAAGTTATATCTCTTGGTGAACTGGATGATTCTAACACCCTCATGTATGTTGGAGATAAAAGGATTAAAATCTTTGATGTAAATAAAGGTGAAATGATCGGCGAGGGATATCTCCACGAAAAGAGAAATGAATATATAGTTCGAAGCATCATATGCAGAAAAGAAGAACAACAAGCTATAACCAGATCGATGTTGTCCTCAACGGCAATTGATGAGGTTAGTTCTAGGCTTCTAGCCCTTCTATCCATACCTGGTAACTTCCTCTCATAATTTGTCTTTACTTGCAGAAAAAATTGTGGGTAGTAGATTCTCTATGCTGCAATCACATGACTGGTATAAAGGGACTTCTATCTGATACAAGACACGAGGTACAGTCATTTGTTACCCCCAGAGGTGCATTTTTAAGCTCAAAAATTGGAAATGTGAAGACTAGTACAGTAACACTGTTTAATGTGTTGTACTGTAAGGGACTGAGGTATGTTCATTACAATTGAATCGTATGTTGAAAATGTTCTCATCCAATAACGTATGGGTTGCAACTGTTTACTAATCCAATTTAATGCTTTCTTCTATGCAAAAACAGACAGAATCTCATATCCGAAGGTCAATTAGACCGTGACGGCTATTCATGTACAAGGCTTGCTCACAAATGCAAGATTCAGTGGAGAGGGACTCAAGAAGTTGTTGGTCTAGCTCATCAGGACGATAATGCACTGTATTACGTGGATTATTTTCACTATGTCAGCGACCCATCTTTGAAGCATACGAGGAATGATGGAGAATGCATACAGAAGTTGAAGCGTCCGCGGCAAGATGGATCCTCTCCATCTAGTAGGAAAAGGACTGCGTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA002322

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA002322&oldid=40046"