BGIOSGA002416

From RiceWiki
Revision as of 10:36, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA002416| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA002416, complete gene.| tag = P0024G0...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA002416

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA002416, complete gene.

LocusTag

P0024G09.24

Ensembl Transcript ID

BGIOSGA002416-TA

Ensembl Protein ID

BGIOSGA002416-PA

Length

1474

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:2815358..2816831

Sequence Coding Region

2816626..2816831,2816318..2816530),complement(2815914..2816274,2815358..2815867

Genome Context

<gbrowseImage1> name=IndicaChromosome01:2815358..2816831 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:2815358..2816831 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGCAGTCCTCGTCCATCCAGAACGAACTGTTCGTCGTCTGGGCCTGCTTCCTCCTCCTCCTCCTCGGCAGCGCCGACACCATGACGGCGTTCAGCTTCAATGACAGCAGCCAGCAGACGAGGTCCATGATGAACCAGACCCTCCACGTCGTGTACCTCCTCTTCCTCATCCTCTACTACAAGGCCAGCTCCGCGGCACCTTCCTCGGAGAACCAGGTGGTGTACGAGTACATGAAGTACGAGCCGCTCAACAGCGCTGGCATTCAAGGTGGCTCCTATGACCCCAAAACAATGGAGGAGTACATCTATCTCGTCGACGGTGAGGAGGTGGAGAAGGTGGACAATGGGGAGGTCATAAAAGTGTCGTACAAGGTTCCAGAGACGGTGGACGTCGAAAAGTGTCCACGAGTGAGGTTAAGTACGACAAGTGCCGAGACTTTGTCGTCAAGGGGCTCCTCGCCAATGACGAAGACCTCGGCAGGGCATTCCGGGCTTGGGTTCCTCTTTGACTTCTTTTACGCTCGGTACCCCTCAATCAAGGACACCCTGGCTCCTGACCTTGCTGTGTACATCGTGATCCTGGCGACTAGCTTGTTCACCCTCTTCTCTCCAGACCTTCTCCGATACCGGCCTCAAGGTCCCATTGGCAGCAACGCTGCCAACAACATCCTTATCCATGGCTTTAATCTCGACCTCCTTGTCACCCGCTTGGTCATTGTCTGGTACATCTTCCTCGAGTCGTACCAATTCCTTGCCTTTATCTTCTCCGACTGGCACAAGGCATTCATGGAGGTCCCGCTAAAGGTGTTGTGCCATTTCACTGTCACCAGGTACTGGAAGGGGACCATCGGCCAATACTTCATCCTCGACAACATCCAACCTCACTGGGTCAAGACCTTCCTCTCATGGTTCTCTCTCGAGGCCCAGGCCCTTGATTCATCATTGATGACTCGCTCCGTCCGCCTGATGCCGGTGGTGCGGGACGCTGTGCTCCGTGAGCTCAAGAACTGCGATGGCAAGATCACCGACGGGAGGATGTGGATGTACCGGACAGGCATTATCGACTTGAACCTCGATCGTGATGTCTTGCTCGGTCACACGTATGCACGGTACATACTGACATGGCACATCGCCACAAGCATATGTGACTATGGGCTTAGCATGGACACCACTGCTGGTGGCATTCCAGCCGGAGCTGGTCCCGGACAGCACGTACACGAGCACTTCGATGGCCCGTGGCACACTGCAGAATGCCTGCGACTTCCTCGCCAAATGCGAGTCCGCCAGTGA</cdnaseq>

Protein Sequence

<aaseq>MQSSSIQNELFVVWACFLLLLLGSADTMTAFSFNDSSQQTRSMMNQTLHVVYLLFLILYYKASSAAPSSENQVVYEYMKYEPLNSAGIQGGSYDPKTMEEYIYLVDGEEVEKVDNGEVIKVSYKVPETVDVEKCPRVRLSTTSAETLSSRGSSPMTKTSAGHSGLGFLFDFFYARYPSIKDTLAPDLAVYIVILATSLFTLFSPDLLRYRPQGPIGSNAANNILIHGFNLDLLVTRLVIVWYIFLESYQFLAFIFSDWHKAFMEVPLKVLCHFTVTRYWKGTIGQYFILDNIQPHWVKTFLSWFSLEAQALDSSLMTRSVRLMPVVRDAVLRELKNCDGKITDGRMWMYRTGIIDLNLDRDVLLGHTYARYILTWHIATSICDYGLSMDTTAGGIPAGAGPGQHVHEHFDGPWHTAECLRLPRQMRVRQ</aaseq>

Gene Sequence

<dnaseqindica>1..206#302..514#558..918#965..1474#ATGCAGTCCTCGTCCATCCAGAACGAACTGTTCGTCGTCTGGGCCTGCTTCCTCCTCCTCCTCCTCGGCAGCGCCGACACCATGACGGCGTTCAGCTTCAATGACAGCAGCCAGCAGACGAGGTCCATGATGAACCAGACCCTCCACGTCGTGTACCTCCTCTTCCTCATCCTCTACTACAAGGCCAGCTCCGCGGCACCTTCCTCGTCAGCCTCTTCCTCCTCTGGTGCTTGAGCGTGGTGCGGCTGGGCTTGAGGGTCAAGGCGTACCTATGAACGAACCGCTCCCATGGGCTCATCAGGGAGAACCAGGTGGTGTACGAGTACATGAAGTACGAGCCGCTCAACAGCGCTGGCATTCAAGGTGGCTCCTATGACCCCAAAACAATGGAGGAGTACATCTATCTCGTCGACGGTGAGGAGGTGGAGAAGGTGGACAATGGGGAGGTCATAAAAGTGTCGTACAAGGTTCCAGAGACGGTGGACGTCGAAAAGTGTCCACGAGTGAGGTTAAGGTTCGCAGCCGATCATGTCGGTCATATCAACTTCCCTTTACAGTACGACAAGTGCCGAGACTTTGTCGTCAAGGGGCTCCTCGCCAATGACGAAGACCTCGGCAGGGCATTCCGGGCTTGGGTTCCTCTTTGACTTCTTTTACGCTCGGTACCCCTCAATCAAGGACACCCTGGCTCCTGACCTTGCTGTGTACATCGTGATCCTGGCGACTAGCTTGTTCACCCTCTTCTCTCCAGACCTTCTCCGATACCGGCCTCAAGGTCCCATTGGCAGCAACGCTGCCAACAACATCCTTATCCATGGCTTTAATCTCGACCTCCTTGTCACCCGCTTGGTCATTGTCTGGTACATCTTCCTCGAGTCGTACCAATTCCTTGCCTTTATCTTCTCCGACTGGCACAAGGTGAAGATGTTGTGCCGATATGTACGCAATGAGCCATGGCACCAAGGCATTCATGGAGGTCCCGCTAAAGGTGTTGTGCCATTTCACTGTCACCAGGTACTGGAAGGGGACCATCGGCCAATACTTCATCCTCGACAACATCCAACCTCACTGGGTCAAGACCTTCCTCTCATGGTTCTCTCTCGAGGCCCAGGCCCTTGATTCATCATTGATGACTCGCTCCGTCCGCCTGATGCCGGTGGTGCGGGACGCTGTGCTCCGTGAGCTCAAGAACTGCGATGGCAAGATCACCGACGGGAGGATGTGGATGTACCGGACAGGCATTATCGACTTGAACCTCGATCGTGATGTCTTGCTCGGTCACACGTATGCACGGTACATACTGACATGGCACATCGCCACAAGCATATGTGACTATGGGCTTAGCATGGACACCACTGCTGGTGGCATTCCAGCCGGAGCTGGTCCCGGACAGCACGTACACGAGCACTTCGATGGCCCGTGGCACACTGCAGAATGCCTGCGACTTCCTCGCCAAATGCGAGTCCGCCAGTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA002416