BGIOSGA002427

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Revision as of 10:36, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA002427| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA002427, complete gene.| tag = P0480E0...")
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Gene Name

BGIOSGA002427

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA002427, complete gene.

LocusTag

P0480E02.34

Ensembl Transcript ID

BGIOSGA002427-TA

Ensembl Protein ID

BGIOSGA002427-PA

Length

6683

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:2616396..2623078

Sequence Coding Region

2622607..2623078,2621651..2621756),complement(2617990..2618188,2617207..2617275),complement(2617032..2617106
,2616844..2616942),complement(2616604..2616759,2616396..2616521

Genome Context

<gbrowseImage1> name=IndicaChromosome01:2616396..2623078 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:2616396..2623078 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGTACAGCAACTTCAAGGAGCAGGCGATCGAGTACGTGAAGCAGGCGGTGCAGGAGGACAATGCCGGCAACTACGTCAAGGCGTTCCCGCTCTACATGAACGCGCTCGAGTACTTCAAGACCCACCTCAAGTACGAGAAGAACCCTAAGATCAAGGAGGCCATCACCGCCAAGTTCACCGAGTACCTCCGCCGCGCCGAGGAGATCCGCGCGGTCCTCGATGAGGGGGGTGGGGGTGGTGGCGCCAACGGCGGCGACGCGGCCGTCGCCACGCGGCCCAAGACCAAGGGTAAGGATGGGGAGGGGGGTGGGGATGATTCCGAGCAGTCCAAGCTGAGGGCTGGACTCAACTCCGCCATCATCACCGAGAAGCCCAACATCAAGTGGAACGATGTCGCCGGCCTCGAGAGCGCCAAGCAAGCGCTGCAGGAGGCCGTCATATTGCCTGTCAAGTTCCCGCAGTTCTTTACGGGTAAACGGAGACCATGGAGGGCTTTTCTTTTGTATGGTCCACCAGGAACAGGAAAGTCTTATTTGGCTAAAGCTGTTGCAACTGAGGCTGATTCTACATTTTTCAGTATATCTTCATCAGACCTTGTTTCAAAATGGATGGGAGAGAGTGAAAAACTTGTTGCAAACCTTTTCCAAATGGCTCGAGAAAACGCTCCTTCCATTATCTTCATTGATGAAATTGATTCATTGTGTGGTCAACGAGGAGAAGGAAATGAGAGTGAAGCTTCTAGGAGAATCAAAACTGAACTTCTTGTGCAAATGCAGGGTGTTGGCCATAATGATGACAAAGTACTGGTTCTTGCTGCTACAAACACGCCATATGCTCTAGACCAGGCTGTGCGCCGGCGCTTTGATAAACGTATTTACATTCCGCTACCCGACCTGAAAGCAAGGCAACATATGTTTAAGGTCCATCTCGGGGATACACCACACAACTTAAATGAAAGTGATTTTGAGAGCTTGGCTCGTCGAACAGACGGGTTTTCTGGTTCGGATATTGCTGTTTGTGTAAAGGATGTGTTATTTGAACCTGTCCGCAAAACACAGGATGCCATGTTCTTCTTTAAGGCTGATGGTGATATGTGGATGCCTTGTGGACCAAAGCAATCTGGTGCCGTACAAACAACCATGCAGGAGCTCGCATCCAAGGGCCTTGCAGCAAAGATCCTTCCACCACCAATCTCAAGGACAGATTTCGAGAAAGTCCTCGCCAGGCAGAGACCGACAGTGAGCAAGAAAGACTTGGAGGTGCACGAAAGGTTTACAAAAGAATTTGGCGAGGAGGGTTGA</cdnaseq>

Protein Sequence

<aaseq>MYSNFKEQAIEYVKQAVQEDNAGNYVKAFPLYMNALEYFKTHLKYEKNPKIKEAITAKFTEYLRRAEEIRAVLDEGGGGGGANGGDAAVATRPKTKGKDGEGGGDDSEQSKLRAGLNSAIITEKPNIKWNDVAGLESAKQALQEAVILPVKFPQFFTGKRRPWRAFLLYGPPGTGKSYLAKAVATEADSTFFSISSSDLVSKWMGESEKLVANLFQMARENAPSIIFIDEIDSLCGQRGEGNESEASRRIKTELLVQMQGVGHNDDKVLVLAATNTPYALDQAVRRRFDKRIYIPLPDLKARQHMFKVHLGDTPHNLNESDFESLARRTDGFSGSDIAVCVKDVLFEPVRKTQDAMFFFKADGDMWMPCGPKQSGAVQTTMQELASKGLAAKILPPPISRTDFEKVLARQRPTVSKKDLEVHERFTKEFGEEG</aaseq>

Gene Sequence

<dnaseqindica>1..472#1323..1428#4891..5089#5804..5872#5973..6047#6137..6235#6320..6475#6558..6683#ATGTACAGCAACTTCAAGGAGCAGGCGATCGAGTACGTGAAGCAGGCGGTGCAGGAGGACAATGCCGGCAACTACGTCAAGGCGTTCCCGCTCTACATGAACGCGCTCGAGTACTTCAAGACCCACCTCAAGTACGAGAAGAACCCTAAGATCAAGGAGGCCATCACCGCCAAGTTCACCGAGTACCTCCGCCGCGCCGAGGAGATCCGCGCGGTCCTCGATGAGGGGGGTGGGGGTGGTGGCGCCAACGGCGGCGACGCGGCCGTCGCCACGCGGCCCAAGACCAAGGGTAAGGATGGGGAGGGGGGTGGGGATGATTCCGAGCAGTCCAAGCTGAGGGCTGGACTCAACTCCGCCATCATCACCGAGAAGCCCAACATCAAGTGGAACGATGTCGCCGGCCTCGAGAGCGCCAAGCAAGCGCTGCAGGAGGCCGTCATATTGCCTGTCAAGTTCCCGCAGTTCTTTACGGGTGAGCGGCTGCTGCGAGGATAACCAGTATATTTTCATTCTCCTTGTTGTAGAGAATAGAGGTGATTGCAAAATTGGTGGTGGATCCGATCGTATAGGCCGTACATGGATATTGATCTCGATCAAAACGGATAGGGCGAGTATTGTTGATTGCCAACACTAATCATTCCATGTTGATGGTTGCTCGGTGTGCAGGGTTAGCTCGCGTAATTACTGTATTTTGTTTGTAGATGACTGTTTGGGTGTCGACTATGGTTCAGAGTCCACTTCTAGAGGGTGCTGGGTGCAACTATTATGTTGTGTAGTCTTGGTGGAAATCTTGAAAGTTACATCCTAGAGGATTGCTAAAATTGATATTAACATGATCTTGGTACTAGACAAACAATGTGGAGTAAAACCATAATTTACAGCTAGTAGTTTGAATTGAAAGGCAGTTATGGAAACAAGGGAAAAAAATGCTGCTTTAGTGATAGGTGCATTGGTTGTTACAGTGTAATCTATAATCATGCAGCAAGTTACTAGCTTGACATACATTCAATTGTTTAATCTTGCAAATAGTTATTTTCAAATATTGAGGGTCTGTTTTCCTCGTGCTTCTAGTGACCTTCTTAATGACTTACAAGATACAGTAAGTGAATTTTCTAACAGCTACTAAGATAAAAGTACCATTATTCTCAACTCTCAACCATTGTTCAAGTGTTCATGACTAACATCTTGCGCATCTTCTTTGTTACATGATAAATTTCTCCATGGTAAACAACGACTATAAAAAAATGTGTACATGAACTCATCTTAAGTCTGGGATCTGGTGTTGTTAGCTATTTTATACTAATGGAGATTTCTTTCTTAAGGTAAACGGAGACCATGGAGGGCTTTTCTTTTGTATGGTCCACCAGGAACAGGAAAGTCTTATTTGGCTAAAGCTGTTGCAACTGAGGCTGATTCTACATTTTTCAGGTAGTTATACCCTCATATATATACCTATATATTTCAACTACATATCTTGACAATAAATCCTCACTCTTACTAATTCCATTACTAAAACTCAATGACGTGGTGCCTTTTACGTTGGTGTCATGGTAGATGTTCAGTTGAGTTGTGTGTTAAACTAACATTCTCCCAACATCCCTAACTCTTTCGCTGCTACCTCACTACATGTGTATGTTCTGAAACTGTAATTTGTAGCATGCTTTGCTCTCTTTTTTCAGTGGTATTGAACAGCAATCAAAATACTTATGTTTTTGTGATTCCATTTTGCACTTCTGTGTGTACTCAAGGGTTTAATGTATTCCTATGAGCTATTCAAAATTCATCCAGCATTTTCCTTTGGAAAGATTATATTGAGCTTTTGATACTTCCTGTTGATACTGTAGTAGTTTTGCAGTTCATGTCTTGGGGTACCATTAAGGCTTTAAAAAACTGCCAAGATTCCTTCTCTAAGTGGCAATAGCTAGTTAGTCTTATTTTTTCATGCGGCAATTTCTCTTGTTGATTTTTTCTCTATATTTTTTAAAGTTCAAATTATGCAGCTGTTATTGTCAATATTTATGAAGCTGCATGTATTCTGTGTATAAATGTATGGATAATGTTCAGAATTAAATAGCTTGGAACACCAGTAGTGCCTTGACTCCTTTCTCTGGATAAGCTGATGTCCTGATTCAGTTGTTGCCCCATTGCTGCAGTGACACTCTTGGTGAGCCTATAAGAATGTTTCTAGGCAGCCAAAATCCTAAAAAAAAATGTATAATTGATGCAGGCAAGTGAGCTTTTTTCTCAAAAAAGAAAACATTTATGGAAAACTGTGAAAGCTGTTTCTTGCAAGGTGTGTCCTATTAATAGCAGCTCTTACATAACTACTTTTGGTTTGGTCACTTTTCATGTGTGCAATAAGCTATTTTTAAGCCATCAACATCCCAAAGCTTAAAGCAGATACTTATTTTACACATGTTGTATACCGAGTTCGATTCATCTTTCTTTGTCTTTGTATAGATTTGTTTATTTTTAGTACATATCTAACACCTGTGTTGTAATGATACCATGCGTAACCTAAAACGGCTGTTGTTTTACTTCATTTGTTTTTCTTTGACGTTTTTGAACTAACCAACGTCAAATAAAAGAAATGGAGGGAATACTTATTTTACTGGGAGCACTTGTGGTTTCCTTGACATATAATAGCTAATGCATATGTTTATAGAAGAATTGGTATGTTTTGATGGCATGATGCCCTGGCACATTTTTTCTGTTTTCAAATATGTTTAAACATTCTCTAGCAATTATTACTCCTGATCTGAATAACTTTTGTGCATTCATTTTTCGCTGCTAGCATCAGTTGTCCTACACAGGATGCTTATCCCTTGATGGAACTATAGAGATATAGAGCCAAAATTTTTATTTATAATAATCTATAATCCTAAAATTAAATAATCAGTAAATTAGTGGTATTATTTAGCAAAATAGTAAGGACACTACTGGTCACAGCATCCAGGTGTGGACGCTGTAACAAACTGCGTCCATCAGCTGGCGCAGCCCAATGCTCCCCGGCCAAGTCCACAAACGTATAGGTTTACTCGACCTGACACAAGCACCGGCCGCCTGCTGTCCTCCTTTGTCCTCCTCAATCGCTGCAGCGCGGTGGTCCCGGGCACTGTTTACAAATTTCATACAAATGTTTACATGTTCATGCAGTAGACAAAGCAATCATTGAACACATATTTCCTGTACCTAGAATAAGAATCTCAACATTTATCCATGGCAGCAGCAAAAGGAGAAGATTTAACTAGGTCTAGTTGCTATAGTTGATACTAGAATTTCCATGATATTTTTGAGTTTAGAAGGAGAGATTTCTACTATAAATGGTCTTAATAATTGTATAATGCCTGCTAAAATAGATAAATTCCCCTTTATCAACCTGTTCTTTAAAACGCAAAACATACGGAGAGGCTAGACTTACCTTGTAAACTGCCTTCAGAAGGCCACAATGATCTTTATTTAGAACAATAGCACATACTGTTGCTCAATTCTTACACTGTACCAAAAACAGTTGAGTGATCACTTATCAGTCATCACTGAAATAGTCATCACTGAAATATAGGCAAATAACTAATATTGGTTGCAGATTGAATACTAAAGGCAGTATTTGAAATGTCCAATGCCTTCTGAGGTTCTGATTATCACTGTAATATCAAATTCAGTGTGCAGAACCAGGTTCTTATCCATTAAATGGAATTGTGGCCTGCATAACAGGACATTGCTCAGATATAAGTTCATGTTTTCTACTTGGTTCCAGTCAGAACTCATAAAAGTCCCTAGCCCCCACTGTTTTTTGTTTGCCAGAAAACAACTGGTTTGTGGAGTTCAGCGTAAAGCTAGAAATCAGTCAATATCTTTCTGAATAAATTCAGAATTGGTCAAAAGCTGGTTTAATCCGGGACAGATTGATGTGCAAACTAAGGGTGTGTTGGTAGTGGCTGTTGTGAACTTTTCCCTCCAGCACGTAAAACGGAGTGACTCATTAGCGCATTATTAATTAAACCTTGCTTAAAAAAAACTTGAAAAATGGATTAATTTGATTTACTAAAGCAACTTTTCTATAGAATTTTTTTTTGTAAAAAACGCACCGTTCAGCTGTTTGGGAAGCATGCACGTGGGAAACGAGAGAGTGAAGTTGGGAAATGGCGGGTTCGAACACAACTTAAGCAGAGAATCTTGCTGCCCAGAACAGTTTAACAAGAAAATGTTGATGTTGACATATTTTCTAACCCTTGGTGTTGATATCAAAATGGATTTGAGTTTAGAGCATTATATGGTAGTAGTAATAATGTAGTATTACCGGACCAATGAACATTTTACACAGCCACTTCCAATGCATAGCTATATGGTAGTAGTAATAATGTAGTATTACCGGACCAATGAACATTTTACACAGCCACTTCCAATGCATACTAAAAGAAAGTTCATGAGACAGTCCTGTAACAGTTGACGGTCTATCATGTATGCATTGATAATTCAATTTCGCTAGCAGTTCCAAAGTAATAAAAAAGTTAGGTCTTTTCTAATCCTACCACTAGAGTTCTGTAGCTAACCACACAAGCAGTTTGTATTCACTGTTGACCACACAATTCCTCAAAGATTCAGTTACTTGCGATACCTATCTAGCAACACCACATCTGATCATTGTGTGATTAATACTGGGAGTGGCTACAGTCCAACGATTATTTTTGTGGTTTCTCATGCCACAGCTTAATTCATGTTTACAATGATGTTCAGACATCTGTGAAAGAGAAACTGCAGTATTCCTTTTCTTCTACCTGATTGCTCCATGATGTTGCCAATGATCAATATCAATGTATACCATATTCATTTGTATTGTTCGTGCAATATATTTTATTATGTTTCATTTAATGTGTTTGCTTTATGCAGTATATCTTCATCAGACCTTGTTTCAAAATGGATGGGAGAGAGTGAAAAACTTGTTGCAAACCTTTTCCAAATGGCTCGAGAAAACGCTCCTTCCATTATCTTCATTGATGAAATTGATTCATTGTGTGGTCAACGAGGAGAAGGAAATGAGAGTGAAGCTTCTAGGAGAATCAAAACTGAACTTCTTGTGCAAATGCAGGTGAATTTTAGCTTATATTATTAACTTTTCTTAATCAGGTGCCTGCTACCTGAATACTTTAAATGTGTACTTGGACGTGTTATTCTTAGAATGATAATGATCCTGAAAGTTCAGAGCTTCAATTGGAGACGCACAAAATGCTGTTATATTTGAAACTTATATAGTTCGTTAAGGATCAAGTTATTGAAACAGTGCTTCTAACTTGTATATTTGAGGGGCAAAAAGGAACATGGTATATTTTCATTTCACATTTTAGTTCTAAGATTTGTTGCCACACCGTTTTAGCTAATACTGGCGTACTGGACCGGCTACTTCCTCTAATACCAGTAGGTTTCTAGCACCAAGTCCAAACAGAGTTGTACTAGTATCAGGTGTCTTAGTTAGGGATATTAGCCAGGCCAGATCTGAAGCTATTCCATCCAGATTTGGAATCATAAAAGTGAAAACGTGCTAAATTTCCAAGTAGATCAGATGCGAATTGGCTGATTAGTTGCTTTCTAGATACATGGATATTGATGCATGGCTTGACCGCTTGACCATAATAATCGAATACCACATTTGATGGGCTTCAAATACTGTCCATCTTTTCTTAGAGCATGTATCATGTTATTCCTTGTTATCTGAAGCATTCCATGGTTTGTTAAACTATTTAGATGCCCTTTTTGTTACACCAACTTACTTACCTTTTGCTTTGTTTCGCTGGTGAATGTCCAGGGTGTTGGCCATAATGATGACAAAGTACTGGTTCTTGCTGCTACAAACACGCCATATGCTCTAGACCAGGTTTAAGAAGATCTATAAAACTGTGTTGCACCATTCAGAACTGTCAAAATTCTCTTGTTCCATTGAACAATTTAGTACTTACTTAAATCCATTATCTCAGGCTGTGCGCCGGCGCTTTGATAAACGTATTTACATTCCGCTACCCGACCTGAAAGCAAGGCAACATATGTTTAAGGTGCAGAATTGTCCAATTCAGTTTCAAGAAAAATTGTCATGTTCTGTTGTTACAATCTTTGGCTGAGGGCAAACCTTTAATTTATCCAGGTCCATCTCGGGGATACACCACACAACTTAAATGAAAGTGATTTTGAGAGCTTGGCTCGTCGAACAGACGGGTTTTCTGGTTCGGATATTGCTGTTTGTGTAAGTTGTTTTCTGCAACATTCTCATGTATCCATGCTCTGTTAGCATATACTGAAATCTCGTTGCTCTTTTTTCTTTCAACAGGTAAAGGATGTGTTATTTGAACCTGTCCGCAAAACACAGGATGCCATGTTCTTCTTTAAGGCTGATGGTGATATGTGGATGCCTTGTGGACCAAAGCAATCTGGTGCCGTACAAACAACCATGCAGGAGCTCGCATCCAAGGGCCTTGCAGCAAAGGTAAGATTGATTGACATTTCCTCCACTGCGCATGTTAGAAGAGGCTTCTGATGATTAGCAAGATTTATTTCCTGTTATGTAGATCCTTCCACCACCAATCTCAAGGACAGATTTCGAGAAAGTCCTCGCCAGGCAGAGACCGACAGTGAGCAAGAAAGACTTGGAGGTGCACGAAAGGTTTACAAAAGAATTTGGCGAGGAGGGTTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA002427