BGIOSGA002438

From RiceWiki
Revision as of 10:36, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA002438| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA002438, complete gene.| tag = OsI_002...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA002438

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA002438, complete gene.

LocusTag

OsI_00292

Ensembl Transcript ID

BGIOSGA002438-TA

Ensembl Protein ID

BGIOSGA002438-PA

Length

4049

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:2327161..2331209

Sequence Coding Region

2330399..2331209,2328080..2328826),complement(2327161..2327258

Genome Context

<gbrowseImage1> name=IndicaChromosome01:2327161..2331209 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:2327161..2331209 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGCCAACACCAAGCTCTCCTCCTCTTTGGCTCTTCCTGTTCCTATCCAACCTCATCGCCACCACCCATGCAGCCGCAGAGATCATCCCGAACGCCACCACGCCGTCGTGCCCGTCGTACCGGTGCGGCCACGCCGTCGACATCCGGTACCCGTTCTGGATCGACGACAACACGAGCGGCGGCGGCGCCTACTACTGCGGGTACCCGAGCCTGCGCCTGGAGTGCCGCCGCGACACGCCGGTGCTGGCGCTCCCGTCGGGGGAGTACGCCGTGACGCACATCCTGTACGGCGACAGGACGGTGTCCCTGTTCGACCTCGGCGTGTTCTCCCGGTCGAACACCTGCCCGCTCGTCGGCCGCAACCTGTCCCTCCCGGCGGGGTCGCCGCTGTCGCTGACGGACAGGGACGCCAACCTCACCTTCTTCATCCACTGCTCCTTCATGGGCATGCCGGCCCACCTGGTGGCCTGCCTCGAGGGCGACGGCCGCCACCACTCCTACGTCTTCCGCGACGGCGACGACCGCACGCCGTACGGGTACGCGGCGCTGTGCCAGGACGTCGTCGGCATGCCGGTGCTCAGGCGGTCCCTCCTCGGGGGGAATTACAGCAGCCCGCTCGACGCCGCCGTCGTGCCGGCGCTCAACATGGGGTTCGAGCTCGGCTGGAGGCCACGGGAGGACGGCGACTGCGGCGACTGCGAGAAGGCCGGCGGCTGGTGCGGCCACCGCCGGCGCGCGGCGCACGAGCCCTGGACCTTCGCGTGCTTCCGGACCGTGACAATCACCGCGCGGGCTGATACGAAATCTCCAGCCATGCTACTGCTGATCACTCTCCCAATTGCTAGCTCCACCGTTGATGCCATAAACACGACCAACACCACATCGCCGTTCTGCGAGCCGGCGAGGTGCGGGAACCTTACCATCGGCTATCCATTCTGGCTCGCCGGCAAGCATCCGCCGGAGTGCGGCTACCGAGCCTTTCAGGTCACATGCGACCACAAAAATGCTTCCCTCAAGAACGGGTTCTGGACATACCAAATCCAGCACATCTTCTACCACAACAGCTCCTTCATGGTCACCAACGAGCAGCTGACGGACGGCCAGTGCGTCATCGAGAGTTTTGTCAACGCCTCCTCCGACCTCGGCCTCACGCTGTTCAAGATTAGCCCCATAAACCGGGAGCTAGTCTTCCTCTACAACTGCAGCCAGGGTCGATCGCAGCTTCCAATCTCTTGGGCGCCCGTGGGTTGTGCGAAAAATGATTCGTCCAACTCGTATGCCTGGCTTGCGGGGAAGTACAAGCCTGATGACGATTTCAGACAACTGCCGGGGAACTGCACGGTGTCAATGATCCCGGTGCTGGGGTACGACGGTGCGGTGGCGAAGAACTACGAGCGGCTCATCAAGGGTGGATTTCTTCTCGACTACACGGCCGCGGCGGGGCCGGACGATTGCGAAGATTGCTCGAGGAGCGGCGGCTGGTGTCGGGTGAATGTCACTGACGATGGGCTGGAGTGCCAATGCCCCGAAGGCCTGACGCCCTCCGGATTCACGTGTGTTGGTACACTTAGCTCAATCAATATTATCAGTGGTGTTGCATTGGTTAGTGTTCAGGAAAAGCTATCCTTATTCTCGGAACCTAACTCTGTTTTCTGA</cdnaseq>

Protein Sequence

<aaseq>MPTPSSPPLWLFLFLSNLIATTHAAAEIIPNATTPSCPSYRCGHAVDIRYPFWIDDNTSGGGAYYCGYPSLRLECRRDTPVLALPSGEYAVTHILYGDRTVSLFDLGVFSRSNTCPLVGRNLSLPAGSPLSLTDRDANLTFFIHCSFMGMPAHLVACLEGDGRHHSYVFRDGDDRTPYGYAALCQDVVGMPVLRRSLLGGNYSSPLDAAVVPALNMGFELGWRPREDGDCGDCEKAGGWCGHRRRAAHEPWTFACFRTVTITARADTKSPAMLLLITLPIASSTVDAINTTNTTSPFCEPARCGNLTIGYPFWLAGKHPPECGYRAFQVTCDHKNASLKNGFWTYQIQHIFYHNSSFMVTNEQLTDGQCVIESFVNASSDLGLTLFKISPINRELVFLYNCSQGRSQLPISWAPVGCAKNDSSNSYAWLAGKYKPDDDFRQLPGNCTVSMIPVLGYDGAVAKNYERLIKGGFLLDYTAAAGPDDCEDCSRSGGWCRVNVTDDGLECQCPEGLTPSGFTCVGTLSSINIISGVALVSVQEKLSLFSEPNSVF</aaseq>

Gene Sequence

<dnaseqindica>1..811#2384..3130#3952..4049#ATGCCAACACCAAGCTCTCCTCCTCTTTGGCTCTTCCTGTTCCTATCCAACCTCATCGCCACCACCCATGCAGCCGCAGAGATCATCCCGAACGCCACCACGCCGTCGTGCCCGTCGTACCGGTGCGGCCACGCCGTCGACATCCGGTACCCGTTCTGGATCGACGACAACACGAGCGGCGGCGGCGCCTACTACTGCGGGTACCCGAGCCTGCGCCTGGAGTGCCGCCGCGACACGCCGGTGCTGGCGCTCCCGTCGGGGGAGTACGCCGTGACGCACATCCTGTACGGCGACAGGACGGTGTCCCTGTTCGACCTCGGCGTGTTCTCCCGGTCGAACACCTGCCCGCTCGTCGGCCGCAACCTGTCCCTCCCGGCGGGGTCGCCGCTGTCGCTGACGGACAGGGACGCCAACCTCACCTTCTTCATCCACTGCTCCTTCATGGGCATGCCGGCCCACCTGGTGGCCTGCCTCGAGGGCGACGGCCGCCACCACTCCTACGTCTTCCGCGACGGCGACGACCGCACGCCGTACGGGTACGCGGCGCTGTGCCAGGACGTCGTCGGCATGCCGGTGCTCAGGCGGTCCCTCCTCGGGGGGAATTACAGCAGCCCGCTCGACGCCGCCGTCGTGCCGGCGCTCAACATGGGGTTCGAGCTCGGCTGGAGGCCACGGGAGGACGGCGACTGCGGCGACTGCGAGAAGGCCGGCGGCTGGTGCGGCCACCGCCGGCGCGCGGCGCACGAGCCCTGGACCTTCGCGTGCTTCCGGACCGTGACAATCACCGCGCGGGCTGATACGAAATCTCCAGGTACGCCCACTCGAGTACACGTATGCATTGTTTGTTCCGTTTCGTGATGTTTTGGGCCGGCCCAAGAACGGCCAGGGTTTTTCCCAGCCCAATAATGATAAATCCCGTGACGTAGTATACGCCTCTGTCGCCCAACCTTTATTACGAAATTTCACGCGTAAAGTGACGCGATCAGGCGACCAGTGGCCTGTTTGGTTCCATGGGCTAATGTTTAGCCCTCACCTTTTAGCCTTAAATTAGTCCTTAAGGATCTAAATAGGTGGGTTAATTTTGAGCTAATGTGAATTAGCCCCCCTTAAAACATTAGCCCCTCCAATGGGTGCTAATGGGGCTAATTTTGTGTGGTGATCATCAAAAAGCAGCTCTCTCTCTCTCCTCTCTTTCTACTCTTTCTCCACCTTTTAGCCTTGAATTAGCCCATGGACCCAAACATACCACCCTAGGCTAATGTTTAGCCTACCAATTCATGACTAAATATTAGCTCTTAAAATTAGCCTTGGGCTAATCTTCCAAACAGGGCCCAGGTACAATTAACCATAACCTAATTTGGTAAGCCGACATGGATCGGTAAAACTTATTCTGGACGGACTGGATTGGTTGGAAGAAGAAAAATAGTACGCGTCGTACCGTCGTTTCTACCGATGTGCGCTTCCCTAGTGGACAGGGGCGGATCCAGAAACAAAAGTTGGGGGGACTCAACATACCGAGTACATCGATATAAACACATAATCTCAGTATTAAACTATGCTAAAATGCTATTATGAGACCTTTAGCACCTCCTATCTTATCAACTATGATAAAAAAAAATTGAAGGAGGACGCTTAGGGGGTATTATGGGTTTCGTGGGTACCCAAATCGCTAGTGGAGTAGTGCGCTCAACCCAAATCGCAACGCGGATGTGCAGAAACTTAGCAGCCAAGTACGTACTACTACGCGGTCTCATACTCTCTCAAAGAAAAAAAAAAAAGGACACTGTTCAGAATGCGTAACAAAAATCCACACGCACATACTACGTAGTAACACGTAGAATAATCCAGCTGAGAGTTCTTGAGACCATATTTTCTCCAGCGACGTGAGACTGCTAGTCTGCTACTGCTCAGTCATCATCATTTCAGTTAGAACGAATTGAAGGACCGTTATTTTTCTCGCGTCGGATGGGTTACCCCCGAATTTTCCAAAACCAAGTCTGAATCGAATAGGTCTCCACCGTGGGTAGTCCTAATCCTCTGCGGTCACTGGAAGGTGGGCCCGATTTAGCGATGACCCCACATGTTGGTGAGCTGCCACTGTGCCACTGGGCGGCACTCGCTGATGTCCACATCAGTGACCAATAAGCAGCATCAGCTACCGGAGAAGAATGGTCCAACAAGGAGACTGAGGAATGGTCAACACATTCGGCAAGCAACATGTTTCGCGCTGCCTGCCTGACCAATCCGTTATCTTCTTCCCCGATGCATGCATCATCAGTTCCTCGCCTTCTTCGTCTCGCCCAAATCTGCTGCGTATCGATCGATCGCTTCCACTGCAGCATGCATCCGTTTCGTGCTTCTGCAACTGCTATGATCTGTTTAGCCATGCTACTGCTGATCACTCTCCCAATTGCTAGCTCCACCGTTGATGCCATAAACACGACCAACACCACATCGCCGTTCTGCGAGCCGGCGAGGTGCGGGAACCTTACCATCGGCTATCCATTCTGGCTCGCCGGCAAGCATCCGCCGGAGTGCGGCTACCGAGCCTTTCAGGTCACATGCGACCACAAAAATGCTTCCCTCAAGAACGGGTTCTGGACATACCAAATCCAGCACATCTTCTACCACAACAGCTCCTTCATGGTCACCAACGAGCAGCTGACGGACGGCCAGTGCGTCATCGAGAGTTTTGTCAACGCCTCCTCCGACCTCGGCCTCACGCTGTTCAAGATTAGCCCCATAAACCGGGAGCTAGTCTTCCTCTACAACTGCAGCCAGGGTCGATCGCAGCTTCCAATCTCTTGGGCGCCCGTGGGTTGTGCGAAAAATGATTCGTCCAACTCGTATGCCTGGCTTGCGGGGAAGTACAAGCCTGATGACGATTTCAGACAACTGCCGGGGAACTGCACGGTGTCAATGATCCCGGTGCTGGGGTACGACGGTGCGGTGGCGAAGAACTACGAGCGGCTCATCAAGGGTGGATTTCTTCTCGACTACACGGCCGCGGCGGGGCCGGACGATTGCGAAGATTGCTCGAGGAGCGGCGGCTGGTGTCGGGTGAATGTCACTGACGATGGGCTGGAGTGCCAATGCCCCGAAGGCCTGACGCCCTCCGGATTCACGTGTGGTAAGTTCGTTTCCGCTTACGATCCCATTTCTTCCCCGTTCCGTTTTTTTTTTTCATCAGTATTCCCTTCGTTTTTGTTTTGCTGTGATTTCGATTCGCTAGCCCTAACGAGATGGAATGATAGATGATCATATCGACAAATCGTACCCTTGTTGGGAGAAAAATGGTTGTTCACGGGCATGATTTACCAACCCAATTAGCTGACCATCTACAGTTACATAGGCTATCCAAAACGAACAAAAAATCGACTTGGCCAGCGAATCATGTTAGAAAACGATATGCAAACAAACGATAAAAAATAATATATCAATAACAGAAGACACGAGATTTAACGTAAAAAATCCTTCCTAAGCAGGAGAGAAAAAAACTACGGGCACCAGCTAACAAAATATCTTCACTATATCGGGGTGAGGTTACAACGCTGCACGGCAGCTTACAATAGGTATATATATGAAGTGGAACCCTAAAAGGGATGACGATTCGTACCGCGGGGACTCCGCCCCCGCACCCCTAGGCGTCCCCAGGTGCACAACCCAATGGGCTAGCTTAGCCTTTATTAAGTGCAAATGAATTTGGATCATAACTCAACAAATGATGTACAGAGAGAAAGAAAGAGCATCGTTTTTCACGCACAAGTTTCCCGAACTATTAGGCGTTGTGTTTTTTTAAAAAAAAACTTTATATAGAAAAGTTGTTTTAAAAAACATATTAATGGATTTTTCAAGTTTAAAATAAGCATATTTAATTAATTATGTATTAATAGTTTACCTCCTAGTTTTACTTATGTTCTCATTTTTCTCTATCTCTCTTCTCAATCACAGTTGGTACACTTAGCTCAATCAATATTATCAGTGGTGTTGCATTGGTTAGTGTTCAGGAAAAGCTATCCTTATTCTCGGAACCTAACTCTGTTTTCTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA002438