BGIOSGA002494

From RiceWiki
Revision as of 10:37, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA002494| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA002494, complete gene.| tag = OS01G01...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA002494

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA002494, complete gene.

LocusTag

OS01G0121200

Ensembl Transcript ID

BGIOSGA002494-TA

Ensembl Protein ID

BGIOSGA002494-PA

Length

2213

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:1451241..1453453

Sequence Coding Region

1453220..1453453,1452435..1452506),complement(1452212..1452279,1451955..1452105),complement(1451752..1451832
,1451549..1451638),complement(1451241..1451354

Genome Context

<gbrowseImage1> name=IndicaChromosome01:1451241..1453453 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:1451241..1453453 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGGCGACCATCTGGCATTGCTTGTGGATCGGCTGCTGACGGAGTCGACGCTGGACGCGGCAATCAGGAAGCAGGTGGCCGATCTGCAGGCGGAGACGGTGGCGATCGACTACTGCTGCGACGGCGACGGCGATGGCGGCTCGGCGAGGAAGATGGTGGAGTGCAGGATTTGCCAAGAGGAGGATTGGGATACCAGCATGGAGGCACCCTGTGCTTGCTGTGGCAGCCTCAAGTATGCGCACCGGAAATGCATTCAGCGTTGGTGCAATGAGAAAGGCGACACCGTTTGCGAAATATGTTTGCAGCAATTCAAGCCTGGTTATACTGCCCCACAGCAACTGTTTCACTATGGAAGTATACCGATGAACTTCAGAGGAAATTGGGAGATTGCTAGGCAAGATCTCCATGATTCCCAGATAATAACAATGGTGCCATCGGAGCGCGACTTCATGGATGGTTATGAGGACTACTTACCCATTAGGACGAGAAGCAGCACCCTGTGTTGCCGAACAGTCGCCATAATTTTCATGTCACTCCTGGTTCTTCGCCACACTCTTCCTCTTATGATTGGTGGGGATGGGGAGTACTCGTTGGCCTTATTCTCGCTTCTTGTCTTGAGGACCGCCGGAATCCTATTTCCAATCTTGGTCATGGTGAGAGCATTGGCAACCTTCCATCGTCGTCGTCGCCAGCAGGAAAGACGGGAAATGTATATGACTTCGTCAGACAGCGAAGAGGAGGAGGATTATTCAGATACCGATCCTGCACAGCCAATTCATTCTCAGACACGCCTGGTACCAATCTACTGA</cdnaseq>

Protein Sequence

<aaseq>MGDHLALLVDRLLTESTLDAAIRKQVADLQAETVAIDYCCDGDGDGGSARKMVECRICQEEDWDTSMEAPCACCGSLKYAHRKCIQRWCNEKGDTVCEICLQQFKPGYTAPQQLFHYGSIPMNFRGNWEIARQDLHDSQIITMVPSERDFMDGYEDYLPIRTRSSTLCCRTVAIIFMSLLVLRHTLPLMIGGDGEYSLALFSLLVLRTAGILFPILVMVRALATFHRRRRQQERREMYMTSSDSEEEEDYSDTDPAQPIHSQTRLVPIY</aaseq>

Gene Sequence

<dnaseqindica>1..234#948..1019#1175..1242#1349..1499#1622..1702#1816..1905#2100..2213#ATGGGCGACCATCTGGCATTGCTTGTGGATCGGCTGCTGACGGAGTCGACGCTGGACGCGGCAATCAGGAAGCAGGTGGCCGATCTGCAGGCGGAGACGGTGGCGATCGACTACTGCTGCGACGGCGACGGCGATGGCGGCTCGGCGAGGAAGATGGTGGAGTGCAGGATTTGCCAAGAGGAGGATTGGGATACCAGCATGGAGGCACCCTGTGCTTGCTGTGGCAGCCTCAAGGTTATGGCTTTTCCTTGGCTTTGTGAATTGTTTATTCTGTAATTCTGATTTGTTACCGTTATGAAAAATATATCCTTTTTTCAGATGGAAAATTTGGTCTTTTGGTCTCCACTTTTAGTGGGAGAAGATAAATTAGTTAATTGGTGTCCATGGTTTTCTTTGTGGTCACTTTAGATTTCTAGTTCTAGAGGAGTAGTTCACTAGTTATTTTAGATAATAGTAGTTCACTAGTTGACTTAGGATGAAAATTGTTGACATTTATGGTTGGGGTTAGCTGCAGTAGGTTCACTTGGTTGTGTACTATCATACATGCTAATTAAGTATGCGAAAAAGGTCAATCCTGGATTTAAGAAAAGTTGTTATGAAAAATCAGCTGCATTTGCCTCGATGTAACTTGGAAGTCACTGCCTCGTATTGGCCTTCCTATTTGATAGTGATGTTGCTGAGAAACAAAACAAAATAAGGTGTTGGTGTTCTTTCGAAGTAAGGGAAATGGAGGAGGCTATCTGTGACCTTCAAGCAATGAGTGGGGCAACTACCCACATTATCTAGCAAGGTCAAATGTAGTTGAAAGTTCAGTAAAACATTCTGAATTCGGTGCTGTTTGTTGCTTCTTGTTCTAGCAAATGATACTGTAATATAATGAATGTATTTCAGTTGGTTATGCAGGTGAATTTTTGCAAGATATTAAATTCTTAGCTTCTCCCTTGCAGTATGCGCACCGGAAATGCATTCAGCGTTGGTGCAATGAGAAAGGCGACACCGTTTGCGAAATATGTTTGCAGGTAAAATCATCTTGGTTCAACTATGCATTCTTTGTAGCCTTGTGGAACTGTTTATAGTACAGACAAATGTGTTTGATAGCGATACGATTTGAGGACATATAAAACTGTTCAAGCATGCATGGGCTAATCCTCTGATGTGATATCTCTTTCTGCAGCAATTCAAGCCTGGTTATACTGCCCCACAGCAACTGTTTCACTATGGAAGTATACCGATGAACTTCAGGTACTCTCTTGGGGATCCTAAGTGATAATTGGTTGCTGTGCCTGACTAGTCAGCATCTGTAAATTCTTACATTTTTCTTCTGTTTCTTTCCCTGATCCCTCTACAGAGGAAATTGGGAGATTGCTAGGCAAGATCTCCATGATTCCCAGATAATAACAATGGTGCCATCGGAGCGCGACTTCATGGATGGTTATGAGGACTACTTACCCATTAGGACGAGAAGCAGCACCCTGTGTTGCCGAACAGTCGCCATAATTGTGAGATTCCTTGCATCTGGATAGATAAATATCCTTTAATGACAATTATCTATCACCCAGTTCAATCCTGGCTAATTCTTGTGTTTCCTTTCTGATGGAATTCTGTCCCTGTGATTGAATAGTTCATGTCACTCCTGGTTCTTCGCCACACTCTTCCTCTTATGATTGGTGGGGATGGGGAGTACTCGTTGGCCTTATTCTCGGTAAGATCGATGTCCAAATTGAGTTTAGATCATCACTGCAAAAAAGAATTATCACACTTATCTTGAAGATCAAGCTCCTGACTGAGTGTCTGTACTTCTGATGGGGGTAAAAGCTTCTTGTCTTGAGGACCGCCGGAATCCTATTTCCAATCTTGGTCATGGTGAGAGCATTGGCAACCTTCCATCGTCGTCGTCGCCAGCAGGTAATTCCATCACTGCATGATCTGCCATTGTTGGAGCCTCCTCAGGTGCAGTGAAATGCAGTCCTAATCCTGCTCAGTTAGCTTGAGCAGGTCTACACCTGAGCAGAGTCCTCCATCTTAACCATTCATAGTATATGCTACAATCTTCCTTGGCTGGATCATAACTCTGGGATCTAGATCACTTAACACTGCAGGAAAGACGGGAAATGTATATGACTTCGTCAGACAGCGAAGAGGAGGAGGATTATTCAGATACCGATCCTGCACAGCCAATTCATTCTCAGACACGCCTGGTACCAATCTACTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA002494