BGIOSGA002508

From RiceWiki
Revision as of 10:37, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA002508| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA002508, complete gene.| tag = OS01G01...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA002508

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA002508, complete gene.

LocusTag

OS01G0117850

Ensembl Transcript ID

BGIOSGA002508-TA

Ensembl Protein ID

BGIOSGA002508-PA

Length

4591

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:1074363..1078953

Sequence Coding Region

1078726..1078953,1078618..1078678),complement(1078463..1078527,1078312..1078407),complement(1077896..1077976
,1077652..1077807),complement(1077461..1077553,1076184..1077352),complement(1075857..1076062
,1075651..1075775),complement(1075533..1075571,1075221..1075262),complement(1074363..1075106

Genome Context

<gbrowseImage1> name=IndicaChromosome01:1074363..1078953 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:1074363..1078953 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGTCGTCTCCTTCAGGGTGTCCCGACGCGGCCGCCGCTTCTACCCTCCGCCGCCGCCTCCGCCTCCCGCGGCCGCAGCAACCGCCGCCGATCGCGCGGCAGCGCCAGCAGAAGGCTCGCCCCTGCCGCCGCCTCTGCCCTGGGATGTGAGTGCCCTCGGCTATCTGTTCCTCTCCATCGTTGTTTGCTTGAAGAAAAGAGCAATCGCGATCGTGTGGATTGAGTTGCTCGGCGCCGCTGCACGATCGGATGTATATGATAGAGACGGAGTTGGTTCTGATGATTTAGATCTTGGGCCGTCTTTTGCACTGAACCTGTTTCCGGATGGGTATTCAATTAGTGACCCAGGCAAGCGTCTGTTGGTTTCTGCAAAGGGAATGCTTCTGTTTCTGATTGGCGATGATCCACAGAAGAGGCCGTACAGCAAAGCATCTCAAGCTTTGTTTTCTGATATTGAGCATGGCTGCTTGCCTCAAGTCATCTTGGGCGACATGCCTTGCAAATTTAGAAATGGAACTATTGTGTGTGAGGTGCGGGACTACCGGCCCTTTCTGTCTAATGCTGGCGATTCTTCAGGAGATGACTTCCCAATAGTGAATAGAGTTTCTCTTAGATTGGGCACTGAACGTGTTGTGAAAGATCTAGCTTCTGTTGTTAATGCTTCATGGACTTATCACGATCAATTGATTGCCGAGTCCACCATCCTCCGTGCCTTGCAACCCAGACTTAATTTGGACCCTACACCATGCCTTGAAAGACTTCAGAATTCTGTTAAGAAGATTGATTTAGGTCTAAATAAAGGGAGGCAGAAAATTAAAGCTACATCTATTGACAATACTTCTGCCGATCCTCCTGAAAATTGCAAACCCAAGGAATTCATCACCTGTGAAGGAGCAGTTGTATGCATTGAAAATGAAGCTCCAGAAGGCTTGCCACGTGGAATATTGAACGGCTTATCTATGGACTGTCCACTCGCTCTCCAAATTAAGAAGGCCCAATCAGCTGCAGGATCTGATCCTGATACTGCTATTCAATACTCTTCTACCCTTATGAATAGCTCTGTCTCGTGTAACATTAAACAAAGTGCATCCTGTACTCCTGCTCCTGACCTTTTGCTTCAGAGTCAGCAGGCACAGATAGCAATTTTGCAGGTTGATCATGAAAACGAACAACCACAAAAGGAGACAGTTCAACTACAGAACAGAAAGGAGCATTCAAATCTTCCACGTGAAATACATGACTGCCAAAGCTGCAGGCCTTCAAACAAACATTCATTGTTGAGCTCTGAAAGTACCAAATGCCATTTTCAGAAGTCAATAAGGTCTTCAAACAACAAAGGGCTTAATTTGGTATCTCCAAACCAACAGCCTGTAAAGGTTAATTTAGATCAGACAACAGGCAGCAAGGACATGAGAGTACAGCAACAAAAGTCCTTGTCAGCGTTCACAGCGGACTGTCCACATCCTTCCTCAGAGACAAATAATTCATGTGTTGAAAAAATCCCCAAAGAGGTTAATTATTCAACAGTAAGGTTAAAAGACAGAAATCTGCCCTCAACTGTTGGTCCAGGCAATTATTGTGTAGAAGAGCTCAAAGACAGAACAACGCCCTCTGTAATCTCATGCAGTGAAAGTTCCAGAAAGGCTCCCAGTAAACCTCCTAAGGTTGTTACAGAGCCCCAACCTTCTTCTTCAAAGAGGAAGGTCTTAGGAGTTTATACTTATTTGTATCAGGAAATCGATTCAAAAGAGAAAAGGCAGAAAAAAGCTGATACACAGAGCAATACACCTTGTGAGAATGTAAGTCCAGGAGAACCAAATGTTACTGATGGCATTAGCAGTGAACTGGGTATTTCTCCAGATATTGAGTCATGTATTGGAGACCCTTCATATACCATTGAACCTGATATTGAAAAGATTCTATCTGAGGTCATCCTGACTTCAAAGAGGCATGGACTGAATGAAAGGGCTGCTAAACTTGATGGTTCAGAAAGATCATGGCCATTGCCACCATCCAAATTCTTTCTGTCTGAGAATACTGCAGACATTGCATATACCCAGAATGAAATCATGTCAAACTATCCAACTGGGAGAACTATGAATACTCGGAAGATTAGAAGGCTTAGTTTTCACCCTGTACAGTATTTATGTAGAGGTGTTGTTGATGAATGCCATTACACACTTCGTCTCCTTGAATCCGAAGCACCGGATGATCATCAAGTAGCGGTGGAAACGATCTATGGGGATGAGCATGTATACATTTCTACTCTTCCTACTTCTCACCATGCAAACAAGCTTGTGGATCAATTCATTTTGCTGATGAGAAGGGATGGCTACACACTTTGCAATGATATTAGAGAGCAATACGAAGACGCCTCTCACCTAGGTTATCTAACTGGAGGATATCCACAATACCCCGTTTCAAGAACTATGGTGATTAATGGAAGCAACAATATAGGTTGCACCTTCCATAATGGGCCGCCACATGTACATGCAAATGCTCAGCAACAGTGGGTGCAGGCACAACAGTGTCCAACCCTGCCAAGTGTTCAGACAAATTTCTGGAATCCATATCATCCAGGCCAGCAGCATTATACCGGCGGAATCCTCAACCATGGGGGATTGTATGCAAATAGAGCGTTCTCAATGGATCTGGACCAGCATCAACATATTCAACAACGTCAAGGAGTTGGATGGTTCCCAAATGGAGTGTTCTCAATGGATCTAGACCAATATCAACCTGTTCGGCAACGTCAAGGAGTAGGACAGTGCTGGCATTGCAGGCATGATATACCAGGGTTCTTCAGTGAGAGGAGTTATGCCACCCACGCGAGCACAGGCAGCTACAACCAGTGGCGCCAGATATCAACACCTCTGGGTGGCAAGGTGTACCAATGGGATCTGCCAGCTTTTGATAGGCGAGTCTGCGGTTGTACTCCAGTGAATTATGCTGGGAGCAGCACACCATTGTCGACGCTGCATCCGGTTGGAAGTCCACCGATGAGCTCTCAATCGTTTGGCTCCAATGATGGCAGCCTCACAAGCACGCCGGTTCAGCTCCAGGTGCCTCTCGGTTACCAGTACATCTCCCATGGGATGTGGTGA</cdnaseq>

Protein Sequence

<aaseq>MVVSFRVSRRGRRFYPPPPPPPPAAAATAADRAAAPAEGSPLPPPLPWDVSALGYLFLSIVVCLKKRAIAIVWIELLGAAARSDVYDRDGVGSDDLDLGPSFALNLFPDGYSISDPGKRLLVSAKGMLLFLIGDDPQKRPYSKASQALFSDIEHGCLPQVILGDMPCKFRNGTIVCEVRDYRPFLSNAGDSSGDDFPIVNRVSLRLGTERVVKDLASVVNASWTYHDQLIAESTILRALQPRLNLDPTPCLERLQNSVKKIDLGLNKGRQKIKATSIDNTSADPPENCKPKEFITCEGAVVCIENEAPEGLPRGILNGLSMDCPLALQIKKAQSAAGSDPDTAIQYSSTLMNSSVSCNIKQSASCTPAPDLLLQSQQAQIAILQVDHENEQPQKETVQLQNRKEHSNLPREIHDCQSCRPSNKHSLLSSESTKCHFQKSIRSSNNKGLNLVSPNQQPVKVNLDQTTGSKDMRVQQQKSLSAFTADCPHPSSETNNSCVEKIPKEVNYSTVRLKDRNLPSTVGPGNYCVEELKDRTTPSVISCSESSRKAPSKPPKVVTEPQPSSSKRKVLGVYTYLYQEIDSKEKRQKKADTQSNTPCENVSPGEPNVTDGISSELGISPDIESCIGDPSYTIEPDIEKILSEVILTSKRHGLNERAAKLDGSERSWPLPPSKFFLSENTADIAYTQNEIMSNYPTGRTMNTRKIRRLSFHPVQYLCRGVVDECHYTLRLLESEAPDDHQVAVETIYGDEHVYISTLPTSHHANKLVDQFILLMRRDGYTLCNDIREQYEDASHLGYLTGGYPQYPVSRTMVINGSNNIGCTFHNGPPHVHANAQQQWVQAQQCPTLPSVQTNFWNPYHPGQQHYTGGILNHGGLYANRAFSMDLDQHQHIQQRQGVGWFPNGVFSMDLDQYQPVRQRQGVGQCWHCRHDIPGFFSERSYATHASTGSYNQWRQISTPLGGKVYQWDLPAFDRRVCGCTPVNYAGSSTPLSTLHPVGSPPMSSQSFGSNDGSLTSTPVQLQVPLGYQYISHGMW</aaseq>

Gene Sequence

<dnaseqindica>1..228#276..336#427..491#547..642#978..1058#1147..1302#1401..1493#1602..2770#2892..3097#3179..3303#3383..3421#3692..3733#3848..4591#ATGGTCGTCTCCTTCAGGGTGTCCCGACGCGGCCGCCGCTTCTACCCTCCGCCGCCGCCTCCGCCTCCCGCGGCCGCAGCAACCGCCGCCGATCGCGCGGCAGCGCCAGCAGAAGGCTCGCCCCTGCCGCCGCCTCTGCCCTGGGATGTGAGTGCCCTCGGCTATCTGTTCCTCTCCATCGTTGTTTGCTTGAAGAAAAGAGCAATCGCGATCGTGTGGATTGAGTTGGTGTGTGCAAGCGTGCGTTACTGTCGGTTTCGTTTTGATTCGTGCAGCTCGGCGCCGCTGCACGATCGGATGTATATGATAGAGACGGAGTTGGTTCTGATGATTTAGGTGAGGACCTGATCTAATTGCACGATTTTTTGATAATTTTTTTCTGTTGATTGTTGTCGGAGCATTTTCACAAACACTCCTGTGGTGCAGATCTTGGGCCGTCTTTTGCACTGAACCTGTTTCCGGATGGGTATTCAATTAGTGACCCAGGCAAGGTACGGCTTACATCTGAATAGACATTATCTATCTGTAACCTGTTGATCGTAACAGCGTCTGTTGGTTTCTGCAAAGGGAATGCTTCTGTTTCTGATTGGCGATGATCCACAGAAGAGGCCGTACAGCAAAGCATCTCAAGCTTTGTTTTCTGTAAGTGTGATTCTTATTATGTCAATACTTGTATAATTTTTCACATGTGGCCATCTTTTGATGATGTGATCAGAGAGAACTGGTAGTTATGTATACATTTCTTAGAACCACATGCCTTTTTTAAAAAAATAAAATTGAAGTCATGAGCTCTGCCAATCCAGTGTAGAATCATCATGCATTTCATTTCTTTGCTGGTGTTTTTTTGGGAACCAAGTAACTCTATTGCAATTCTATTTGAACCAAAAGATTCTAATCTCCTTAACAAAATTATTTCATCATTACAACCTCTTGCATCGTCACTGCAGATTTCGTAATTGTCCAATGTATTGTTACAGGATATTGAGCATGGCTGCTTGCCTCAAGTCATCTTGGGCGACATGCCTTGCAAATTTAGAAATGGAACTATTGTGTGTGAGGTTAGCTAAAGTCATACTCTAGTTTTGCAACTTTAACATATGTTGTATTTCTGCTCAGGTATCTTCTTTGTACAATGTAAAATACTAGGTGCGGGACTACCGGCCCTTTCTGTCTAATGCTGGCGATTCTTCAGGAGATGACTTCCCAATAGTGAATAGAGTTTCTCTTAGATTGGGCACTGAACGTGTTGTGAAAGATCTAGCTTCTGTTGTTAATGCTTCATGGACTTATCACGATCAATTGGTTAGCCCATCTTTAATCCTGTTATTTACATTGTGATATATCATCAACTATTTCAACATATCACCTACTTTAATTTTCTCTAATCATATGAATTTCAGATTGCCGAGTCCACCATCCTCCGTGCCTTGCAACCCAGACTTAATTTGGACCCTACACCATGCCTTGAAAGACTTCAGAATTCTGTTAAGAAGGTACCCCTGGATTAACCTTTCTGTTTCTGGATTCCAGTAAAAACTTTTGTCCAGTTTGAAAGTACTACAATCTACCTTGTATTTTTTACCAAATCGTTTGCAAAACAGATTGATTTAGGTCTAAATAAAGGGAGGCAGAAAATTAAAGCTACATCTATTGACAATACTTCTGCCGATCCTCCTGAAAATTGCAAACCCAAGGAATTCATCACCTGTGAAGGAGCAGTTGTATGCATTGAAAATGAAGCTCCAGAAGGCTTGCCACGTGGAATATTGAACGGCTTATCTATGGACTGTCCACTCGCTCTCCAAATTAAGAAGGCCCAATCAGCTGCAGGATCTGATCCTGATACTGCTATTCAATACTCTTCTACCCTTATGAATAGCTCTGTCTCGTGTAACATTAAACAAAGTGCATCCTGTACTCCTGCTCCTGACCTTTTGCTTCAGAGTCAGCAGGCACAGATAGCAATTTTGCAGGTTGATCATGAAAACGAACAACCACAAAAGGAGACAGTTCAACTACAGAACAGAAAGGAGCATTCAAATCTTCCACGTGAAATACATGACTGCCAAAGCTGCAGGCCTTCAAACAAACATTCATTGTTGAGCTCTGAAAGTACCAAATGCCATTTTCAGAAGTCAATAAGGTCTTCAAACAACAAAGGGCTTAATTTGGTATCTCCAAACCAACAGCCTGTAAAGGTTAATTTAGATCAGACAACAGGCAGCAAGGACATGAGAGTACAGCAACAAAAGTCCTTGTCAGCGTTCACAGCGGACTGTCCACATCCTTCCTCAGAGACAAATAATTCATGTGTTGAAAAAATCCCCAAAGAGGTTAATTATTCAACAGTAAGGTTAAAAGACAGAAATCTGCCCTCAACTGTTGGTCCAGGCAATTATTGTGTAGAAGAGCTCAAAGACAGAACAACGCCCTCTGTAATCTCATGCAGTGAAAGTTCCAGAAAGGCTCCCAGTAAACCTCCTAAGGTTGTTACAGAGCCCCAACCTTCTTCTTCAAAGAGGAAGGTCTTAGGAGTTTATACTTATTTGTATCAGGAAATCGATTCAAAAGAGAAAAGGCAGAAAAAAGCTGATACACAGAGCAATACACCTTGTGAGAATGTAAGTCCAGGAGAACCAAATGTTACTGATGGCATTAGCAGTGAACTGGGTATTTCTCCAGATATTGAGTCATGTATTGGAGACCCTTCATATACCATTGAACCTGATATTGAAAAGATTCTATCTGAGGTCATCCTGACTTCAAAGAGGTATTGCTCTGCATAACTTCTCTATTTTTAGGTTTCATTTCAAGTTAGTGGGTTGTTATGTGCCAACTATGATGGTAATTCTTTGTACAACTTATCAGTTTCACCATTTGTTTTTCCTTAGGCATGGACTGAATGAAAGGGCTGCTAAACTTGATGGTTCAGAAAGATCATGGCCATTGCCACCATCCAAATTCTTTCTGTCTGAGAATACTGCAGACATTGCATATACCCAGAATGAAATCATGTCAAACTATCCAACTGGGAGAACTATGAATACTCGGAAGATTAGAAGGCTTAGTTTTCACCCTGTACAGTATTTATGTAGAGGTGCGCTTGTTCTTACTTATGTTTGCATAATCTTGTTTTGCTAGTAATCCTTTTCTTTTCCTAAACATTGTCTCGTGGCAGGTGTTGTTGATGAATGCCATTACACACTTCGTCTCCTTGAATCCGAAGCACCGGATGATCATCAAGTAGCGGTGGAAACGATCTATGGGGATGAGCATGTATACATTTCTACTCTTCCTACTTCTGTGAGTACTCTTCAATTGAGTTTCAGAAACCAGGAATAATACCTTTTGATTTCATTCTTACGCATGATATGCTTTGCAGCACCATGCAAACAAGCTTGTGGATCAATTCATTTTGCTGGTAAGTTTGTCTTTTCCAAGGTAGCCGTTGTATTATTATTCATAGAGGCAAATATATTAATGTTTGTTCTTTGGCAATGAGAAACTATCTGGCATATTTAAATCCTATTATTTGCTTGTTCATAAAGTGTGCTTGCCAAAATGTATAATTTTTTTCCTGGAAATCTGTAGAAAAATCATTCAACTAAATTTATGATAATCATCAATGCTTTGCTCTCTATACTATAATAACATTCGAGCTCAATTTCTGAGTTTTATGTTGTTTATGCAGATGAGAAGGGATGGCTACACACTTTGCAATGATATTAGAGAGGTACAGGAATACCTATAACTCTATCAATAACATTACCTGTCTGCACACTGTATATTGAAGCGTACGAGGCATTTCCTTTCTGCCGCTTTACTTGTTTAGTCCAACCCTTTTCAGCAATACGAAGACGCCTCTCACCTAGGTTATCTAACTGGAGGATATCCACAATACCCCGTTTCAAGAACTATGGTGATTAATGGAAGCAACAATATAGGTTGCACCTTCCATAATGGGCCGCCACATGTACATGCAAATGCTCAGCAACAGTGGGTGCAGGCACAACAGTGTCCAACCCTGCCAAGTGTTCAGACAAATTTCTGGAATCCATATCATCCAGGCCAGCAGCATTATACCGGCGGAATCCTCAACCATGGGGGATTGTATGCAAATAGAGCGTTCTCAATGGATCTGGACCAGCATCAACATATTCAACAACGTCAAGGAGTTGGATGGTTCCCAAATGGAGTGTTCTCAATGGATCTAGACCAATATCAACCTGTTCGGCAACGTCAAGGAGTAGGACAGTGCTGGCATTGCAGGCATGATATACCAGGGTTCTTCAGTGAGAGGAGTTATGCCACCCACGCGAGCACAGGCAGCTACAACCAGTGGCGCCAGATATCAACACCTCTGGGTGGCAAGGTGTACCAATGGGATCTGCCAGCTTTTGATAGGCGAGTCTGCGGTTGTACTCCAGTGAATTATGCTGGGAGCAGCACACCATTGTCGACGCTGCATCCGGTTGGAAGTCCACCGATGAGCTCTCAATCGTTTGGCTCCAATGATGGCAGCCTCACAAGCACGCCGGTTCAGCTCCAGGTGCCTCTCGGTTACCAGTACATCTCCCATGGGATGTGGTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA002508

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA002508&oldid=40232"