BGIOSGA002509

From RiceWiki
Revision as of 10:37, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA002509| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA002509, complete gene.| tag = OsI_001...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA002509

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA002509, complete gene.

LocusTag

OsI_00145

Ensembl Transcript ID

BGIOSGA002509-TA

Ensembl Protein ID

BGIOSGA002509-PA

Length

5604

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:1059594..1065197

Sequence Coding Region

1064594..1065197,1062789..1062938),complement(1062554..1062688,1061753..1062084),complement(1061532..1061642
,1061385..1061445),complement(1060948..1061221,1060525..1060693),complement(1060021..1060260
,1059815..1059946),complement(1059594..1059728

Genome Context

<gbrowseImage1> name=IndicaChromosome01:1059594..1065197 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:1059594..1065197 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGAAATCTCTACTTCTCTCCTCTTTGCTTGCGGTTGTTGCAGCAGAAGTTGTTGGAACAGGGCTAAACCCCCAGTACTGTCCTCCTTCCTCCTGTGGCCATCTTGGCAACATATCCTACCCTTTCCGTCTCCAAGGCGATTCGCGCGATTGCGTTGCTACTCCTCGTCCATGGTACAACCTCTCATGTAGCAATGGCAGGGCTGCCATTCAGATCAACAAAGGGACGTACTACGTGACTAGCATCAACTATACCGGTGAGGAATTCTGGGTTGTGGATGCCACCTTGCAAGATGATGATACAAACGGCAGCAGTTGTCCTCTTCCTCTCTCTGATCACCTTCCTTACACGAAGAATTACTGGCGTCTGTATTCGGGGGAAACTTCAACTGATTCTTATGGCGCTATCGATTTGTACACTGTTTCACACAGTTGGGCATGCTTTGTGAATTGTTTCCGAGCAATAACAGATATTATGCCAAGGTACAGGCCCGTTACATGTCTGCTTCCCAACAATTCATTTGTTTTTGTCTCGTTTGATGACTGTGCTGTTGGAGAGCTTCAACCTTCATGTCGATATTTGGCCATGATTCCCTTTGATGAGTCATCGAAGAAGTCCTCAAGTATGGTGCCTGTGCTTTGGAGATGCTCCATGTGCATGTTCGATAATCATGAAAGCATGGTGTATTGTGAGATGTGTGGGGTTTTTCGAGAATCCTTTATGAAATCTGCCAAGGATGGTTCAATAAAAGTCCATGGGATACCAAGTGATTTTGGGACACCTTCGATGCCGAAATCTGATTCTACAAAGATGCCAGTGAATACTCGTACTACAGACTTTGGTGGTGACCCTGAGATAAAGAATGCTAGCATATCTCATGAGAAAGTTGGTTCCACACAGTACGCATCTGTTGGTAGCTCATCAGGCGCTGGGAAAAAGGTGAAACACATTGCACTTCCTGAAGATGTGCCTGTCGAGAGGACAGCTCAATTGATTTCTGATCATTTTCAGCTGAAGGAGGACCAGAGTAGTAGGGCTACCAGTTCTGCACAGAATGAGGATGTGGCCCAGAAACTTTCTTCTGACATACAGAAGCTAGGTTTAGAAAAGAATGAAGTAGATACTGCAAAACCTTATTTACCTGAAGAATATAAGCCTGAGAAGTGGATGTTTGCTAATGAGGAATCAGGAGTGCTGAGCCAACTAAACCTTGCAATAGTAGGTCATGTTGATTCTGGCAAGTCAACACTCTCTGGGAGACTGCTACATCTGTTAGGAAGGATATCGAAAAAAGATATGCACAAGAATGAGAAGGAGGCTAAAGAAAAAGGAAAAGGATCATTTGCTTATGCGTGGGCTATGGATGAAAGTAGTGAAGAAAGAGAAAGAGCTGGCATGGACGGTGAAGGAGGGAAAAGTGTTGGCCAGACAAAAGAACATGCTCAGCTTATTAGAAGCTTCGGCGTTGAACAGCTTATTGTTGCGGTCAACAAGATGGATGCCATCGGGTACTCCAAAGAAAGATTCGAGTTCATCAAGGTTCAACTTGGTAGTTTTCTGCGGGCATGCAACTTCAAAGATTCATCTGTTACCTGGATTCCTCTTAGTGCTGTTGAAAATCAGAATTTGATCAAAATTCCTTCTGATGTCCGTTTAACTTCCTGGTATCAAGGATTTTGTCTCTTGGATGCTATAGATTCCTTGCAGCTTCCATCTCGGGATGTTTCAAAGCCCCTCATTCTTCCTATCTGTGATGTTATCAAGTCTCAGTCAACAGGGCAGTTGGCAGCATTTGGAAAATTAGAGACTGGAGCTATTCGAATTGGTTCAAAGGTTTTAATTTCACCTTGTGGGGAAGTGGCGACAGTGAAATCCATCGAGCGGGATTCAAATTCATGTGACATAGCAAGAGCTGGTGATAATGTAGCGGTTAGTTTACAGGGCATCGATGGGAGTAAGCTAATAGCAGGTGGGATTCTTTGCAACCCTGGTTTCCCAGTGCCTGTCTCTAACTTCTTGGAGCTAAGGGTTCTAGTGTTGGACGTCACCATTCCTATCCTTATTGGCTATCAGGTCGAGTTTCACATACATCATGTGAAGGAGGCTGCGAGGGTTACGAAAATCGTGGCATTGCTTGACAAGGCTGGCAAACCAAGCAAAACTGCACCTCGATTTCTTAAGTCAAAGCAGAATGCAGTTGTGCAGGTTACCTTAGACGCTCCGGTCTGTGTTGAAGAATTCTCCAAATGCCGAGCTCTTGGCAGGGCATTCTTAAGGTCTTGTGGAAGCACAATCGCTGTTGGAGTCGTAACGCGGGTACTCGGGCAAGATCAGAACTGA</cdnaseq>

Protein Sequence

<aaseq>MAKSLLLSSLLAVVAAEVVGTGLNPQYCPPSSCGHLGNISYPFRLQGDSRDCVATPRPWYNLSCSNGRAAIQINKGTYYVTSINYTGEEFWVVDATLQDDDTNGSSCPLPLSDHLPYTKNYWRLYSGETSTDSYGAIDLYTVSHSWACFVNCFRAITDIMPRYRPVTCLLPNNSFVFVSFDDCAVGELQPSCRYLAMIPFDESSKKSSSMVPVLWRCSMCMFDNHESMVYCEMCGVFRESFMKSAKDGSIKVHGIPSDFGTPSMPKSDSTKMPVNTRTTDFGGDPEIKNASISHEKVGSTQYASVGSSSGAGKKVKHIALPEDVPVERTAQLISDHFQLKEDQSSRATSSAQNEDVAQKLSSDIQKLGLEKNEVDTAKPYLPEEYKPEKWMFANEESGVLSQLNLAIVGHVDSGKSTLSGRLLHLLGRISKKDMHKNEKEAKEKGKGSFAYAWAMDESSEERERAGMDGEGGKSVGQTKEHAQLIRSFGVEQLIVAVNKMDAIGYSKERFEFIKVQLGSFLRACNFKDSSVTWIPLSAVENQNLIKIPSDVRLTSWYQGFCLLDAIDSLQLPSRDVSKPLILPICDVIKSQSTGQLAAFGKLETGAIRIGSKVLISPCGEVATVKSIERDSNSCDIARAGDNVAVSLQGIDGSKLIAGGILCNPGFPVPVSNFLELRVLVLDVTIPILIGYQVEFHIHHVKEAARVTKIVALLDKAGKPSKTAPRFLKSKQNAVVQVTLDAPVCVEEFSKCRALGRAFLRSCGSTIAVGVVTRVLGQDQN</aaseq>

Gene Sequence

<dnaseqindica>1..604#2260..2409#2510..2644#3114..3445#3556..3666#3753..3813#3977..4250#4505..4673#4938..5177#5252..5383#5470..5604#ATGGCGAAATCTCTACTTCTCTCCTCTTTGCTTGCGGTTGTTGCAGCAGAAGTTGTTGGAACAGGGCTAAACCCCCAGTACTGTCCTCCTTCCTCCTGTGGCCATCTTGGCAACATATCCTACCCTTTCCGTCTCCAAGGCGATTCGCGCGATTGCGTTGCTACTCCTCGTCCATGGTACAACCTCTCATGTAGCAATGGCAGGGCTGCCATTCAGATCAACAAAGGGACGTACTACGTGACTAGCATCAACTATACCGGTGAGGAATTCTGGGTTGTGGATGCCACCTTGCAAGATGATGATACAAACGGCAGCAGTTGTCCTCTTCCTCTCTCTGATCACCTTCCTTACACGAAGAATTACTGGCGTCTGTATTCGGGGGAAACTTCAACTGATTCTTATGGCGCTATCGATTTGTACACTGTTTCACACAGTTGGGCATGCTTTGTGAATTGTTTCCGAGCAATAACAGATATTATGCCAAGGTACAGGCCCGTTACATGTCTGCTTCCCAACAATTCATTTGTTTTTGTCTCGTTTGATGACTGTGCTGTTGGAGAGCTTCAACCTTCATGTCGATATTTGGCCATGATTCCCTTTGATGGTTGGCATATATCGGACTCACAGCTACAGAATGCAGTTACACAGATATCATAGGATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCATCAGATCCCGCAACAACGGCGATCCACATCATCTAATTGGATTCCGCAACAACGGCAACCCTCATCGCTAGCCCACGCTCACGGGATTCGCGGAAGTCCTTAAGCCCGCAGGATAAAGCCATTAAGAAAGAACTACTAAGCTAGCATGTCCCATTCCAGGTCATATGGTCGACATGATCGCTACGGCGCTTGAATGCCATATAACAGTTGTTATTTAACCTTATGATGATAAATATATGCAACTGAACCACCACCACCATAGCAGGTTCAGAATACATCTGTAGTATGACCGACTTCTCCACCGGTCAATCCAATCCATCAACATATTTATTTCAATTATAGAAAGTATAATTTAATGCAAGGTGATACATATAGATTGCAATTACGAAAATATAACAAGAGTTGGTCAAAGGTGTTGGACTTGCCTGAGATACCCGAAATCGGAGAACAAATAAATGAACGAAGAATTCCAGAAATCCAAGATAAACGCCCAACTGAAAGAAACAATAAAACACAACTAAATACGAGAATGTTTATATGAATGCGATGCACATGATATGTCTAACCCTAATGCACAGGCTGTATATATATAGGTTATGGACTTACTTTTATTTTAAGAAAGCAGTAATTATTTTACTTAAAAGAAATTTGATTCCTATAGAGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNACCCTACGAAGGAGAAAGGTATTATGTCAAAGGTTTGAAGCTAGTACTAGACAGTGTACACCTCAGCATGTAAGAATGGTGAAATAGCTATTGGAGTCGCTTCATGATGCACACCTAACATATCTACTCGTGTAGGTTAGTCACGGCGGTGTAGGTTACTAGGAGCCTTCACCCGTTATCATAATTTGCTCAGTGGTGTTAAATGTTGTTAATGTCATTACATTGTTTCCATCCTGCATTCGTACTTGCTATCGCATCCTCTATTGCCTGATTATGCAAATAAGAATTTCTAGTGCTTAATTACTCTAAAACTTCCAATAGCATTGCTTGTTCAAACAAATGCAGTGATCGTGTAGCTTATGTTTGCCGATTACCTGGTCTTGTGATAATTTCCTTGCCCATTTATCCCATCATATGCACTTCAGATATTTGTTTTCTTGAAGGCATTGTTATTCAACATGCATTTTTTGGAATGAGTCAAATATCATTCATCCAGTCCATCAAAATAAAAACTTACTACAAATTAAATCTACCCAAATTGGGTGAGAATCGAAACATAGCTGGCTGCCAGTTAGAACTACCAGTATTACCTACTGGTTGCTTGCTGAATCCTGGTGCATATGCATATTATTGTTTTATATATTTGACACATTTTGAAATAATTCATATGCTTATACATTTAACCGTTGCTTTCCGCATAAGCTCCACGCATCGAATGCTTTGCTTTGTTGTTGTACAGTGAAGTTTTTTTGTGACTTACTCAGCATATCAAGCTAACTGCGTGTAGTGCAGCTCCTTGATCTCTAATGTTATGTCACCACTCTATTGTGCAGAGTCATCGAAGAAGTCCTCAAGTATGGTGCCTGTGCTTTGGAGATGCTCCATGTGCATGTTCGATAATCATGAAAGCATGGTGTATTGTGAGATGTGTGGGGTTTTTCGAGAATCCTTTATGAAATCTGCCAAGGATGGTTCAATAAAAGGTAACATCCTTCACCCATTCTAATTCTCTTTGAATCACAATTTGTATTCTGACAAGGAATTCTAATGTAATCATAGTGTACTATAACTATTAAATTACAGTCCATGGGATACCAAGTGATTTTGGGACACCTTCGATGCCGAAATCTGATTCTACAAAGATGCCAGTGAATACTCGTACTACAGACTTTGGTGGTGACCCTGAGATAAAGAATGCTAGCATATCTCATGAGAAAGGTACTGCTGGTGCAAATGGTAGATGCTGTACAATTTTGTGTATGCAACTCTGTTCTACCTTTAAACTAGCTTCTCCTACCATAACACCTTATTGAGTTATGAAAAGGATAATTCATAATTCACCATATAAAAGAATCACATTAGCTCATCTTATGTGCGGGAAGCAGATTTTGATCCTTTTCTTTCCCAAGCACCATTGTCACTTACTGTGGCTGAACAGATTGTTCCCTTGCATACCACTAAAAAATGTTTCACTTGTTGGACAACAACAACCCACAGCTCACGTGTCATGCCCTCTGAAGTCTGAACCAAGCTACTTTTGTAAGGGTGACTTATTTGTACTTGATTTGCAGATCTTCCCAACCAGTTGTATCATCTGTTGGTTGATAAGCCTTCCTGTTGAAAAAAAAGCCTGTTAGCTTTGTTCTTTTATTGTCACCTTAATTTAAATTATTTTATTATTCAACAGTTGGTTCCACACAGTACGCATCTGTTGGTAGCTCATCAGGCGCTGGGAAAAAGGTGAAACACATTGCACTTCCTGAAGATGTGCCTGTCGAGAGGACAGCTCAATTGATTTCTGATCATTTTCAGCTGAAGGAGGACCAGAGTAGTAGGGCTACCAGTTCTGCACAGAATGAGGATGTGGCCCAGAAACTTTCTTCTGACATACAGAAGCTAGGTTTAGAAAAGAATGAAGTAGATACTGCAAAACCTTATTTACCTGAAGAATATAAGCCTGAGAAGTGGATGTTTGCTAATGAGGAATCAGGAGTGCTGAGCCAACTAAACCTTGCAATAGTATGCTATACTCATCTTCTGTTCTGAATATGGCATATGTTCCGTAACAATTTTGTTATTCTAAAAGTGCTTTGTCTAAATAGGTTACTGTCTACGAACAATTTGTTTAGGTAGGTCATGTTGATTCTGGCAAGTCAACACTCTCTGGGAGACTGCTACATCTGTTAGGAAGGATATCGAAAAAAGATATGCACAAGAATGAGAAGGAGGCTAAAGAAAAAGTAAGTTTATTATTGTTGTTATTGTACTATACTTGATCCTGATGTTCCATTCATATTCTTGTATTATGGAAATTATTTTTTACCAGGGAAAAGGATCATTTGCTTATGCGTGGGCTATGGATGAAAGTAGTGAAGAAAGAGAAAGAGGTGTGACAATGACTGTGGCTGTGGCTTATTTGGAGACCAAGAAGTACCGTGTAGTTTTGCTTGACTCTCCAGGCCATAAAGATTTTGTACCAAATATGATATCTGGCGCAACGCAAGCTGATGCAGCTATTCTTGTTGTTGATGCTTGCCGGTTCATTTGAAGCTGGCATGGACGGTGAAGGAGGGAAAAGTGTTGGCCAGACAAAAGAACATGCTCAGCTTATTAGAAGCTTCGGCGTTGAACAGCTTATTGTTGCGGTCAACAAGATGGATGCCATCGGGTACTCCAAAGAAAGATTCGAGTTCATCAAGGTTCAACTTGGTAGTTTTCTGCGGGCATGCAACTTCAAAGATTCATCTGTTACCTGGATTCCTCTTAGTGCTGTTGAAAATCAGAATTTGATCAAAATTCCTTCTGATGTCCGTTTAACTTCCTGGTAAGTTATGTTTTGACACACTACTTCCATGCCATTCGAAACACTACATTGTGTAGAATTTTTCAACAGAGATGGCTGTTTCATGCATCTTGCAATTTCTAACCTTTTCACATGGTAATATCGACATATCGTAGTAAGCACTCGTGAGAATAGCATTACTGATATTTTGAAATATTTGGGACCATACTGTCTTATTAGAAAAAAAATCATTTGTTTATCTGAAGAATAGGAATCTTGAACTGATGTCCTTTCAGGTATCAAGGATTTTGTCTCTTGGATGCTATAGATTCCTTGCAGCTTCCATCTCGGGATGTTTCAAAGCCCCTCATTCTTCCTATCTGTGATGTTATCAAGTCTCAGTCAACAGGGCAGTTGGCAGCATTTGGAAAATTAGAGACTGGAGCTATTCGAATTGGTTCAAAGGTACATTCCTCACAAATCAGCAGGGACTATTGATACTTGTATATTTCATTGAGATGAGCTCCAAATATGAGGATAGAGGAAAGATTGATCAAGAGCGTTTACATTGTGACATTTGCTAGTTGCATGTTTGCATGCCAATCTTTCAGTAACAGCATGATGTCGGAATTTGGTCTTTTTTCAAAATATATATATTAATACTTGCTTTTGTACGCAAATGTCTTGACATTCCTATCTGTTTTGACAGCTTGGAACTTGCTGTTGCAGGTTTTAATTTCACCTTGTGGGGAAGTGGCGACAGTGAAATCCATCGAGCGGGATTCAAATTCATGTGACATAGCAAGAGCTGGTGATAATGTAGCGGTTAGTTTACAGGGCATCGATGGGAGTAAGCTAATAGCAGGTGGGATTCTTTGCAACCCTGGTTTCCCAGTGCCTGTCTCTAACTTCTTGGAGCTAAGGGTTCTAGTGTTGGACGTCACCATTCCTATCCTTATTGGCTATCAGGTAAAGATATGACCAAAAGCTCTCCTTTTGATTATTTTCTTCCCTGATGCAATCTGATAAAAATATGGGCCTAGGTCGAGTTTCACATACATCATGTGAAGGAGGCTGCGAGGGTTACGAAAATCGTGGCATTGCTTGACAAGGCTGGCAAACCAAGCAAAACTGCACCTCGATTTCTTAAGTCAAAGCAGAATGCAGTTGTGCAGGTAACAACTGATCACAGATCCTTGTGAGGAGCCATTGCTTCCGAAGTCATCATTTGCGATGTTGTGATTTTCTTGATATTTGTCAGGTTACCTTAGACGCTCCGGTCTGTGTTGAAGAATTCTCCAAATGCCGAGCTCTTGGCAGGGCATTCTTAAGGTCTTGTGGAAGCACAATCGCTGTTGGAGTCGTAACGCGGGTACTCGGGCAAGATCAGAACTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA002509

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA002509&oldid=40233"