BGIOSGA002538

From RiceWiki
Revision as of 10:37, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA002538| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA002538, complete gene.| tag = P0439B0...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA002538

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA002538, complete gene.

LocusTag

P0439B06.10

Ensembl Transcript ID

BGIOSGA002538-TA

Ensembl Protein ID

BGIOSGA002538-PA

Length

3006

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:693554..696559

Sequence Coding Region

695605..696559,695108..695491),complement(694930..695016,694779..694849),complement(694622..694698
,694390..694537),complement(693843..694004,693554..693766

Genome Context

<gbrowseImage1> name=IndicaChromosome01:693554..696559 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:693554..696559 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGTCCTCACCGTCTCCCTCCCCGGGCACCGCAACTCCCGCCACCGCCGCCGCCGCGCCTTCCACCGCGACCCCAACACCCGCGACGCAGCCCAATGCCACGCCGGCCGACCCCTCCATCACTCCCCCGGCCGCGTCCCCTCCCCTTCCCTCCGCCGCCACGCCACCCCCACAGCCCGATTCCCCGCCGCCCTCTCCGCCACCAGCTCCTCCGGTCGCAGTGCCACCGCCGGCCACCGTGCCACCGCCGCCTGTACCCGTTGCGTCTCCACCACCAACCCCGTCAGCCACATTGCCGCCGCCGTCGCCACCGGCTTCAGTGCCGGTGCCACCTACACCTGCTACTACCCCTCCAAAGCCGTCGCCTGTGCAGCAACCCCCAGTGGCTGCATCACCACCTCCATCGTCTCCGGCTGATTTGCCGCCGCCTAATCCGCCGGCTCGCTCAGACACGCCGCCGGTAGTGCAGTCACCTCCACCGCCGCACCGGAGATCGCCGAGAACGCCATGGGCTCCACCGATGGCGCCATCGCCTTCTGGAAGTCCTACCAAGCCTTCTCCAGCTAGTCCATCACCAATTGCTGGAGATCCAATCATCCCTACACCCAATAACCCTTCGTCGCCTCTGGCGACGCCATCAGCACCAGGCTCTGGTACTCCTGTGGTGACGCCACCTGCACCAGTCTCTGGCCCTCCATCGCCAGGCACGGCTCCAGCCACGGCAGCTGATCGATCCAACAAGTCATTAAGTCCCAACACGCAGGACGGCAGCGTCTCGTCGAGCGATGGTGGAATGAGCTCAAGTGCAAAGGCGGGCATCGGTGTAGTCGTCGCTATTCTTGTGCTTAGCTTGGTAGGAGCTGCATTTTGGTACAAGAAGAAACGGAGGAGAGCAACCGGTTACCATGCAGGATTTGTGATGCCATCACCTGCCTCGTCTCCACAAGTGTTAGGGTATTCAGGTAAAACTAACTACAGTGCTGGCAGTCCTGATTACAAAGAAACAATGTCAGAGTTCAGCATGGGCAATTGTCGATTCTTCACTTACGAGGAATTGCACCAGATCACAAATGGTTTTGCAGCGAAGAACCTGCTAGGGGAAGGTGGGTTTGGGTCTGTTTACAAGGGTTGCTTGGCTGATGGAAGAGAGGTTGCCGTTAAGAAACTGAAAGGTGGTGGTGGGCAGGGGGAACGTGAGTTCCAGGCTGAGGTGGAGATAATCAGTCGTGTGCACCACCGCCATCTAGTTTCTCTTGTTGGGTATTGCATTTCGGAGGACCAGAGGTTGCTTGTCTATGATTTTGTGCCCAATGACACACTGCACCATCATCTTCATGGACGTGGAATGCCGGTTTTGGAGTGGTCAGCTAGGGTTAAAATTGCAGCTGGCTCAGCTCGAGGGATAGCATATCTTCATGAAGATTGCCATCCCCGAATTATCCACCGAGATATTAAATCCTCCAACATTTTACTGGATAATAACTTTGAAGCCCAGGTTGCTGATTTTGGCCTTGCAAGACTAGCTATGGATGCAGTCACGCATGTAACTACACGGGTGATGGGAACTTTTGGTTATCTGGCTCCGGAGTATGCTTCGAGTGGCAAGTTGACTGAGAGATCTGATGTATTCTCTTTTGGCGTTGTTCTCTTAGAGCTTATTACCGGTAGAAAGCCTGTTGACGCATCAAAACCATTGGGTGATGAGAGCCTTGTTGAGTGGGCTAGGCCATTGCTCACAGAAGCAATTGAGACTGGCAACGTTGGGGAGCTGATTGACTCCAGGCTGGACAAGAACTTCAATGAAGCTGAAATGTTTCGAATGATCGAAGCTGCGGCAGCTTGCATTCGACATTCAGCATCTAGGAGACCCCGGATGAGCCAGGTGGTGCGTGTTCTTGATAGCTTAGCTGACGTCGATCTAAGCAATGGTATTCAGCCTGGTAAGAGCGAAATGTTCAATGTGGCAAACACGGCAGAAATCAGGCTGTTTCAGCGGATGGCTTTTGGTAGCCAAGATTTCACAACTGATTTCACCCAATCTAGCTGGGATAGTCGTAGTAGAGATGTTGATGCCTCTGGTTCGAGGCCCTTGTAA</cdnaseq>

Protein Sequence

<aaseq>MASSPSPSPGTATPATAAAAPSTATPTPATQPNATPADPSITPPAASPPLPSAATPPPQPDSPPPSPPPAPPVAVPPPATVPPPPVPVASPPPTPSATLPPPSPPASVPVPPTPATTPPKPSPVQQPPVAASPPPSSPADLPPPNPPARSDTPPVVQSPPPPHRRSPRTPWAPPMAPSPSGSPTKPSPASPSPIAGDPIIPTPNNPSSPLATPSAPGSGTPVVTPPAPVSGPPSPGTAPATAADRSNKSLSPNTQDGSVSSSDGGMSSSAKAGIGVVVAILVLSLVGAAFWYKKKRRRATGYHAGFVMPSPASSPQVLGYSGKTNYSAGSPDYKETMSEFSMGNCRFFTYEELHQITNGFAAKNLLGEGGFGSVYKGCLADGREVAVKKLKGGGGQGEREFQAEVEIISRVHHRHLVSLVGYCISEDQRLLVYDFVPNDTLHHHLHGRGMPVLEWSARVKIAAGSARGIAYLHEDCHPRIIHRDIKSSNILLDNNFEAQVADFGLARLAMDAVTHVTTRVMGTFGYLAPEYASSGKLTERSDVFSFGVVLLELITGRKPVDASKPLGDESLVEWARPLLTEAIETGNVGELIDSRLDKNFNEAEMFRMIEAAAACIRHSASRRPRMSQVVRVLDSLADVDLSNGIQPGKSEMFNVANTAEIRLFQRMAFGSQDFTTDFTQSSWDSRSRDVDASGSRPL</aaseq>

Gene Sequence

<dnaseqindica>1..955#1069..1452#1544..1630#1711..1781#1862..1938#2023..2170#2556..2717#2794..3006#ATGGCGTCCTCACCGTCTCCCTCCCCGGGCACCGCAACTCCCGCCACCGCCGCCGCCGCGCCTTCCACCGCGACCCCAACACCCGCGACGCAGCCCAATGCCACGCCGGCCGACCCCTCCATCACTCCCCCGGCCGCGTCCCCTCCCCTTCCCTCCGCCGCCACGCCACCCCCACAGCCCGATTCCCCGCCGCCCTCTCCGCCACCAGCTCCTCCGGTCGCAGTGCCACCGCCGGCCACCGTGCCACCGCCGCCTGTACCCGTTGCGTCTCCACCACCAACCCCGTCAGCCACATTGCCGCCGCCGTCGCCACCGGCTTCAGTGCCGGTGCCACCTACACCTGCTACTACCCCTCCAAAGCCGTCGCCTGTGCAGCAACCCCCAGTGGCTGCATCACCACCTCCATCGTCTCCGGCTGATTTGCCGCCGCCTAATCCGCCGGCTCGCTCAGACACGCCGCCGGTAGTGCAGTCACCTCCACCGCCGCACCGGAGATCGCCGAGAACGCCATGGGCTCCACCGATGGCGCCATCGCCTTCTGGAAGTCCTACCAAGCCTTCTCCAGCTAGTCCATCACCAATTGCTGGAGATCCAATCATCCCTACACCCAATAACCCTTCGTCGCCTCTGGCGACGCCATCAGCACCAGGCTCTGGTACTCCTGTGGTGACGCCACCTGCACCAGTCTCTGGCCCTCCATCGCCAGGCACGGCTCCAGCCACGGCAGCTGATCGATCCAACAAGTCATTAAGTCCCAACACGCAGGACGGCAGCGTCTCGTCGAGCGATGGTGGAATGAGCTCAAGTGCAAAGGCGGGCATCGGTGTAGTCGTCGCTATTCTTGTGCTTAGCTTGGTAGGAGCTGCATTTTGGTACAAGAAGAAACGGAGGAGAGCAACCGGTTACCATGCAGGATTTGTGATGCCATCACCTGCCTCGTCTCCACAAGTGTTAGGTAATCTGATGAAATGCATTTTCAGAAATCGCGCACCTGGAAAATTAAAATCAGTTTAAGTTGTATTACTAGTAGGTGATGAACTGAGCAAGTACAACTCATTTTTTGCCCAGGGTATTCAGGTAAAACTAACTACAGTGCTGGCAGTCCTGATTACAAAGAAACAATGTCAGAGTTCAGCATGGGCAATTGTCGATTCTTCACTTACGAGGAATTGCACCAGATCACAAATGGTTTTGCAGCGAAGAACCTGCTAGGGGAAGGTGGGTTTGGGTCTGTTTACAAGGGTTGCTTGGCTGATGGAAGAGAGGTTGCCGTTAAGAAACTGAAAGGTGGTGGTGGGCAGGGGGAACGTGAGTTCCAGGCTGAGGTGGAGATAATCAGTCGTGTGCACCACCGCCATCTAGTTTCTCTTGTTGGGTATTGCATTTCGGAGGACCAGAGGTTGCTTGTCTATGATTTTGTGCCCAATGACACACTGCACCATCATCTTCATGGTATGGTGGTAACCTTCAGCATATTGCCGCATGAGAGCTCTGCATAGTTCTAGTTCTGTCTGAAAACTGTTTAATTGATCTGCCCTTGTAGGACGTGGAATGCCGGTTTTGGAGTGGTCAGCTAGGGTTAAAATTGCAGCTGGCTCAGCTCGAGGGATAGCATATCTTCATGAAGATTGTAATATTCTTTCTGGTTCTGTACCTTATTAATGTGATCATTTGCACTTCATTTTCATTACATTTATTTCCCTTTTGCAGGCCATCCCCGAATTATCCACCGAGATATTAAATCCTCCAACATTTTACTGGATAATAACTTTGAAGCCCAGGTAACAACATTATTTAGATAAATTGGGAGAGGCGTTATAATGTGACCATTGTTACTAATTGGCTGCTATTCGTGTGTTAGGTTGCTGATTTTGGCCTTGCAAGACTAGCTATGGATGCAGTCACGCATGTAACTACACGGGTGATGGGAACTTTTGGGTAAGTAAATTACTGCCTGCCTTACTGAGGGCACAAGAGAACATCGTACATTTTCATATGATCTAATGATTATTTGTTATGCAGTTATCTGGCTCCGGAGTATGCTTCGAGTGGCAAGTTGACTGAGAGATCTGATGTATTCTCTTTTGGCGTTGTTCTCTTAGAGCTTATTACCGGTAGAAAGCCTGTTGACGCATCAAAACCATTGGGTGATGAGAGCCTTGTTGAGTGGGTAAGCTATATCAGTAACTAGAAATCATTTTTTTTTAGATAATGGAAGATGAGTATATTGAAATTAGTATGTTCAATAAGATTTTTGCCCCTGTATGATCAAATGAAAGCAAATGGAGAAATATATTTTATCAACTGTATTTGAATAGCCAACTTGACTCATTTCAAAGATTCTAATAACGTAGGAATTCACATTGAGCTGTTGATCTCTGCAGTTCACATTTTTTAACTGTGTTCTTATTAGGAGTCAATCCATATAGTTAGCCACTGGTTGAAAAGCGTTCTGATATAAAATGTGGACTGGTCAACTATGAACATCTGCTGAAATCGTGTAGTAAATCAGTCTAAAGAGGGGATCCTTGTGTAACTTACACAATCACTTGCAGGCTAGGCCATTGCTCACAGAAGCAATTGAGACTGGCAACGTTGGGGAGCTGATTGACTCCAGGCTGGACAAGAACTTCAATGAAGCTGAAATGTTTCGAATGATCGAAGCTGCGGCAGCTTGCATTCGACATTCAGCATCTAGGAGACCCCGGATGAGCCAGGTATAGGACTGAACATAATCTCATCACATCTGATTGAACCTGAACCTGTTCATTTTAATCACATCTCTCCTTTCAGGTGGTGCGTGTTCTTGATAGCTTAGCTGACGTCGATCTAAGCAATGGTATTCAGCCTGGTAAGAGCGAAATGTTCAATGTGGCAAACACGGCAGAAATCAGGCTGTTTCAGCGGATGGCTTTTGGTAGCCAAGATTTCACAACTGATTTCACCCAATCTAGCTGGGATAGTCGTAGTAGAGATGTTGATGCCTCTGGTTCGAGGCCCTTGTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA002538

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA002538&oldid=40262"