BGIOSGA002547

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Revision as of 10:38, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA002547| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA002547, complete gene.| tag = OsI_000...")
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Gene Name

BGIOSGA002547

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA002547, complete gene.

LocusTag

OsI_00060

Ensembl Transcript ID

BGIOSGA002547-TA

Ensembl Protein ID

BGIOSGA002547-PA

Length

3089

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:470346..473434

Sequence Coding Region

473401..473434,472610..472809),complement(472466..472514,471820..471995),complement(471552..471735
,471187..471218),complement(471015..471060,470833..470903),complement(470346..470747

Genome Context

<gbrowseImage1> name=IndicaChromosome01:470346..473434 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:470346..473434 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCCGCCCAATCTTCCACTCCCTCGCCGCAAGATGGTTCTGGTGGAGGTGAATTCTCAGACAATTTGGTACTTCAAACCCCACAGCCAATGCGGGAGGATTACATACAGAATGCTGTTAACTTTCTTGGACATCCAAAAGTGAAGGGTTCTCCAGTATTTTACAGGCGCTCTTTTCTGGAAAAGAAAGGCCTTACAAAGGAAGAAATCGACGAGGCCTTCCGTCGGGTTCCTGATCCACAGCCAAACAGTACAGATGTTGCAGCTGTTGCTTCACAACAAGCCGGCATCGCAAATCAATCTGCTGGAGTACAACCTTACGAGACAGTTCAAGCACCACAAGCCATTAACACTGGTCCTATCGTTCCACATGCGCAGCCGCAACTTAGCTGGTCCCGTACTCTCATTGGTGTAGGTGTTTTCCTCGGAGTTGGGGCTAGTGCTGCTGTCATCCTCAAGAAATTGTTTGTTCCTAGGCTAAAATCTTGGATCCAAGGAGCCCATGTTGAAGGGGATGAAATTTCTGGGAATGAACTTAAATCCAAGTTTTATGAAGAAATCAAAGCAGCCATACAAGATTCTGCATCAGCGTTTTCTGATATTGCTAAAACAAACCAAGAGTTGCCTGCTTCAAAGGATGAAGGGCCAACTACAAATTCATGGAGAGCTTCTCAGCAAACAAACGCATACAACACATCACCACGCAGTGATTTTGACTCCGGGAGGCATCCGTTCATGCCAGTACCGGAAGAACCTTCACCTGGAGCATTTCCGGCGAGATCCTATGTTGAGCAGCAGCGGATGCAGAGGCCTGGGTACGGATTTCAGCCTCAGATGAGCAATGACAGGTGGAACCCTGGCTCGCCATTGACGAACTACCACGGTGCTCCTCCGTATCAGCAGTATCACCATGGATCCACCAACGCCATCGATGAAGCTCCAGCTCCAGCTCCAGCTCCACCAGCTGAAAGCCCGTTCCAGCGTCGCTGGGTTCCCCCACAGCCACCGGGCGTCGTCATGCCGGAGGCCGTGGCCGCCATACGGCAGCCGAGGCAGCAAGTTGCAGCGGCATCGAGACCGTCGGAATCCGCCGCGGCGACAGAGCAGCCACAGTCAGGTGACGTCGCCGGTGGCGCCGCCATGGCCAATGCGGGCAATGGCGAGGCCGAGCAAGAGCGGGAAGCTGCTGCTTAA</cdnaseq>

Protein Sequence

<aaseq>MAAQSSTPSPQDGSGGGEFSDNLVLQTPQPMREDYIQNAVNFLGHPKVKGSPVFYRRSFLEKKGLTKEEIDEAFRRVPDPQPNSTDVAAVASQQAGIANQSAGVQPYETVQAPQAINTGPIVPHAQPQLSWSRTLIGVGVFLGVGASAAVILKKLFVPRLKSWIQGAHVEGDEISGNELKSKFYEEIKAAIQDSASAFSDIAKTNQELPASKDEGPTTNSWRASQQTNAYNTSPRSDFDSGRHPFMPVPEEPSPGAFPARSYVEQQRMQRPGYGFQPQMSNDRWNPGSPLTNYHGAPPYQQYHHGSTNAIDEAPAPAPAPPAESPFQRRWVPPQPPGVVMPEAVAAIRQPRQQVAAASRPSESAAATEQPQSGDVAGGAAMANAGNGEAEQEREAAA</aaseq>

Gene Sequence

<dnaseqindica>1..34#626..825#921..969#1440..1615#1700..1883#2217..2248#2375..2420#2532..2602#2688..3089#ATGGCCGCCCAATCTTCCACTCCCTCGCCGCAAGGTCAGGTTTTTCTTCCCCTCTCTTACTGTCTCATATCCTCCGAAAATCGTGGCGCTCCCCGTCCAATCCTTTGGATCAAGATGACGCTTTTCTTCAGACTTGGAATCTTGGCGCTTCTTGCTCGATGTTTCTATCCCGCCGATTGTTAGCCATATAATTTGGGACTGAGTTTATGAGCAACTCTTCTCTTTCTGTTGAGAGACGAGGGTTTGGTAATTTTGAGGGTTAGAACATGAGAACCGCCGAATCTTGTACCGCGATTGCCTACTGGAATAAGCGTAAGAGTCCTGGCTGCTCATATCATCACTAATTCTAGCCTCGTTAGCAAGGGCAACTAGCTTTTGAGGCGATTCAGCCAAGACAAGTTCATGCCCTCTTGTGGTTGTGGGCACAAGTCCAGTGGCTGGCTGCAGTTTTTGCTGCAAATATCGACAATTTAGAGGTCCATAGCACCAAATGAATTTGGAACCACCGGGGAGAAATTGGCTATTCTGAAACCTTGAGTTATTATCTTGTTATTTTGTTAGTTATAGTCACTCAGATTCCCCTGTCCTGAAAATCGAACTGCATTCCCATTTGCTCATGCTGCAGATGGTTCTGGTGGAGGTGAATTCTCAGACAATTTGGTACTTCAAACCCCACAGCCAATGCGGGAGGATTACATACAGAATGCTGTTAACTTTCTTGGACATCCAAAAGTGAAGGGTTCTCCAGTATTTTACAGGCGCTCTTTTCTGGAAAAGAAAGGCCTTACAAAGGAAGAAATCGACGAGGCCTTCCGTCGGGTTCCTGTATGATTTACTTTCTACCGCCCCTACATGGCTGTTTGTATACCTCCAAATGAAAATAAGATGAAACGTTCCTGAAACAGCTTAATGTCTTGTAGGATCCACAGCCAAACAGTACAGATGTTGCAGCTGTTGCTTCACAACAAGGTACCCTATTGCTCTACATGATAAACATTTAGCACTAGCACAGCAATGGGTTGCAGTGATATTATATCACTGCGTTTGTCTTACTTTTGGTTGAGTGGATTGTCCTAATATAGTATTATGACATAATAGCCACCAGGCTTTGCTATATTGTTGTTGGTTAACTTGGACGCACACAACATGCAGAAGTTTTATTGGTTTCACTGAGTTTGCTCAAGTGATGATCTATTGGCAGCTTCTTTTCTTTTGTTTACTTGATTGGAATGTCTTATTTTCAGCTCTTTTTCACTAACTTAATTCAAATTACATCAAGATTTTAGATCTTTAGATTGGTTCTATAAATTATTGTGCTTTGATAGTAGTTCATATCTGTGATTGCAAGTCTGTACCCAAAAATCTTACAATACACTGAAAAATAAACTCTTTTTGTTAGCTTGATCACTTAAAGGCCGTGTTATTTTCTTTGCTTCCAGCCGGCATCGCAAATCAATCTGCTGGAGTACAACCTTACGAGACAGTTCAAGCACCACAAGCCATTAACACTGGTCCTATCGTTCCACATGCGCAGCCGCAACTTAGCTGGTCCCGTACTCTCATTGGTGTAGGTGTTTTCCTCGGAGTTGGGGCTAGTGCTGCTGTCATCCTCAAGGTATATCTCGTGAATTTTGCAGACTATCTTAATTTTAGCAAGTTCTTGAGAAATTAACTCTATATGCGTGCATGTTTTGTACAGAAATTGTTTGTTCCTAGGCTAAAATCTTGGATCCAAGGAGCCCATGTTGAAGGGGATGAAATTTCTGGGAATGAACTTAAATCCAAGTTTTATGAAGAAATCAAAGCAGCCATACAAGATTCTGCATCAGCGTTTTCTGATATTGCTAAAACAAACCAAGAGTTGCCTGCTTCAAAGGATGAAGGTTTCATAATTTTCCGTTGATACATTAGCATGTTTTAGCAGAAGAAATGTACAATAGCTATCGCTGTTTCGGGTTTGATCGTCTTAATGAATCTCACTTGTTTATAGATAAGAAGATACTTACAAAGTTGCCACCCAGCATTTGATTCGCAAGCAGAGGCGTTTAGATCCTTGAGCGATTCTTTGAATCGTATGAGTGAGAATAGGTTTTACCAGTACAATCTAATGGAGGATCATTTTCAATCTGCCCCATGGAATGGTTAGAATCAATTCTTTTTTGTTGCATTGGTTTCTTTAAATCTGTTGCTAATATTGACGTTATCTGTCTGAATAGGGCCAACTACAAATTCATGGAGAGCTTCTCAGGTATAGCTTATTGTTATTTACCCCATTGTGAACTCATTATTCTTATTTACCCTTTCTGTCAATACCTTTTTTTTTTAATCTTTGCATCATTCCGTTGTAGTTCTCATTCGGTTTCTCTATTTACAGCAAACAAACGCATACAACACATCACCACGCAGTGATTTTGACTCCGGTAAGTAGCCTCCACCAGAAGCAGCACAACTTTCTTGTATCATCACCTGAGAATATTTTTTTTCTGCCTTGCACTTATTTTGTGTGCCCTCTTTCGTGTTATCTTTATCAGGGAGGCATCCGTTCATGCCAGTACCGGAAGAACCTTCACCTGGAGCATTTCCGGCGAGATCCTATGTTGAGGTAGGCCATCGTATGATCATGGATTCTAGGTGCAGTAGACATGATAGTATTCCAAAACTTGATGGTGTGTGAGTACTTATTTCAGCAGCAGCGGATGCAGAGGCCTGGGTACGGATTTCAGCCTCAGATGAGCAATGACAGGTGGAACCCTGGCTCGCCATTGACGAACTACCACGGTGCTCCTCCGTATCAGCAGTATCACCATGGATCCACCAACGCCATCGATGAAGCTCCAGCTCCAGCTCCAGCTCCACCAGCTGAAAGCCCGTTCCAGCGTCGCTGGGTTCCCCCACAGCCACCGGGCGTCGTCATGCCGGAGGCCGTGGCCGCCATACGGCAGCCGAGGCAGCAAGTTGCAGCGGCATCGAGACCGTCGGAATCCGCCGCGGCGACAGAGCAGCCACAGTCAGGTGACGTCGCCGGTGGCGCCGCCATGGCCAATGCGGGCAATGGCGAGGCCGAGCAAGAGCGGGAAGCTGCTGCTTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA002547

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA002547&oldid=40271"