BGIOSGA002548

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Revision as of 10:38, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA002548| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA002548, complete gene.| tag = OS01G01...")
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Gene Name

BGIOSGA002548

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA002548, complete gene.

LocusTag

OS01G0106900

Ensembl Transcript ID

BGIOSGA002548-TA

Ensembl Protein ID

BGIOSGA002548-PA

Length

5478

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:461957..467434

Sequence Coding Region

467344..467434,466151..466332),complement(465786..465872,465561..465686),complement(465416..465478
,464562..464711),complement(464259..464326,464068..464179),complement(463883..463987
,463592..463713),complement(462948..463094,461957..462125

Genome Context

<gbrowseImage1> name=IndicaChromosome01:461957..467434 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:461957..467434 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGCTCAAGGTCGTCTCTTTCCCCGGGGACTTGGCCGCGGTCTCATTCCTCGACTCCAACAGAGGAGGAGCTTTCAACCAGCTCAAAGTGGACCTCCCGTTTCAAACGAGGGACAGAAGAGCAGTTTCCCTGAGAAGGACTTGCTGTTCAATGCAACAGGCTCCACCACCAGCATGGCCTGGTCGAGCCGTTGTTGAACCTGGGAGGAGGTCATGGGATGGCCCCAAGCCTATCTCAATTGTTGGCTCAACCGGTTCTATTGGCACACAGACATTGGACATAGTTGCGGAGAATCCAGATAAATTCCGGGTTGTTGCTCTTGCTGCTGGCTCCAATGTGACTCTTCTAGCTGATCAGGTGAAAACATTCAAACCAAAGCTTGTTGCTGTAAGAAATGAGTCATTAGTTGATGAGCTAAAGGAAGCCTTAGCTGATTGTGATTGGAAGCCAGAAATTATTCCTGGTGAGCAAGGTGTCATAGAGGTTGCTCGCCACCCAGATGCAGTTACAGTTGTTACTGGGATAGTAGGGTGTGCAGGACTGAAGCCTACAGTTGCTGCAATTGAAGCTGGGAAAGATATAGCATTGGCGAACAAAGAGACACTTATTGCAGGTGGTCCTTTTGTGCTTCCCCTTGCACAAAAGCACAAAGTGAAAATACTTCCTGCTGATTCTGAGCACTCTGCTATATTTCAGTGTATACAAGGCTTGCCCGAAGGAGCACTTCGCCGCATTATTTTGACTGCATCAGGTGGTGCTTTCAGGGACTGGCCAGTTGACAAGTTGAAAGAAGTAAAAGTTGCTGATGCTTTAAAGCACCCGAACTGGAATATGGGGAAGAAGATTACTGTAGATTCTGCTACATTATTCAACAAGGGTTTAGAAGTTATTGAAGCACATTATTTATTTGGTGCTGAATACGATGACATTGAAATTGTGATCCACCCACAATCTATCATACACTCTATGATTGAAACCCAGGATTCATCTGTGTTGGCTCAACTGGGATGGCCAGATATGCGGATACCAATCTTATACACCATGTCTTGGCCAGACAGAATCTATTGCTCAGAGATCACCTGGCCCCGACTAGATCTTTGCAAGCTGGGTTCACTGACATTCAAAGCTCCTGACAATGTGAAATACCCGTCGATGGATCTCGCCTATGCAGCTGGAAGAGCTGGGGGCACCATGACAGGAGTTCTGAGTGCTGCTAATGAGAAGGCTGTGGAGTTGTTCATCGATGAAAAGATCGGGTACCTGGACATTTTCAAGGTGGTGGAGCTGACATGCGACGCTCATCGGAATGAGCTAGTAACAAGGCCATCACTGGAGGAGATCATACATTATGATCTGTGGGCGAGGGAGTATGCTGCCAGCCTACAGCCATCCACTGGCCTCAGCCCTGTACCTGTCTAG</cdnaseq>

Protein Sequence

<aaseq>MALKVVSFPGDLAAVSFLDSNRGGAFNQLKVDLPFQTRDRRAVSLRRTCCSMQQAPPPAWPGRAVVEPGRRSWDGPKPISIVGSTGSIGTQTLDIVAENPDKFRVVALAAGSNVTLLADQVKTFKPKLVAVRNESLVDELKEALADCDWKPEIIPGEQGVIEVARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAQKHKVKILPADSEHSAIFQCIQGLPEGALRRIILTASGGAFRDWPVDKLKEVKVADALKHPNWNMGKKITVDSATLFNKGLEVIEAHYLFGAEYDDIEIVIHPQSIIHSMIETQDSSVLAQLGWPDMRIPILYTMSWPDRIYCSEITWPRLDLCKLGSLTFKAPDNVKYPSMDLAYAAGRAGGTMTGVLSAANEKAVELFIDEKIGYLDIFKVVELTCDAHRNELVTRPSLEEIIHYDLWAREYAASLQPSTGLSPVPV</aaseq>

Gene Sequence

<dnaseqindica>1..91#1103..1284#1563..1649#1749..1874#1957..2019#2724..2873#3109..3176#3256..3367#3448..3552#3722..3843#4341..4487#5310..5478#ATGGCGCTCAAGGTCGTCTCTTTCCCCGGGGACTTGGCCGCGGTCTCATTCCTCGACTCCAACAGAGGAGGAGCTTTCAACCAGCTCAAAGGTTGGATCTTTTCCTCTTTCTTATCCCCTTCCGGATCAACTTTACTGCTCTTTCTTGTTTCTTGGCCCTCGACTTGCTTCTGTTTTCCTCTCATCTTGTTTAGACTTCATTTCGTCTGTTTAGCCTGTTTCAAGATAATCCGCAGTGTGTTCAAAGAGCACCCATTCCTGGTGCCGATTAAATTAGGCACTTCTACTCACTCGACACAGCCGGCACCCATGCTGTGAGTGGGATTAGGAAAGCTGCTGCTTTTGCAAGGATTTATGCCACAATTTTGGTTTGGATTGCTTGGGCTAAAATAAAATTGGTCTTCGTTCTCACAGTGCATGGGAATGGCAGCTTCTGAGTTCTGGAGAACATAGACACACAGTCATTGTAAAGTTGCAAACTCTGTGCCTTAACTGTTTTGATTTTGACATCTGAAAAGGTGGAATTTCCCCGGTTCGCAGAAAAAAAAGGGGTCTGAATTCATTTCTTTGAGATTAAAAACGGGTTCAGATTTTTCTCTTATACGGGTATAAGACACAATTCTTCCAGAATTTATGCAACTTCCTCTTGGTCGAGAATTATGCTGTTGTCAGTATTACGTGTCTAGAATCGAACCCCTTTTTGTAATCAACTGGGTGGATTAAATTCTGAAATATCTGAGCATTATCTTCATGCTTGCAACTTCTATCTTTGGAATATCTAGTGTTCTGAGAATATATTCTGCATAGATTCCAATTCAGTTTCTACTTTCTAGTGATATGGTTCTATTCAGATGAGTTGCACTACTGTAACGTGCTTTTACTCTAAATTGCTTGGTGCACATGAAACACGCAGTCTGCCAAATTGTCAAGATCGGCCTCAATTAGCTCAGGCCTCAGGACTATTTTTTTTTTTCTGCCATGTTTCTTGAGCATATTGCAGCAAACGAGTTAGCAGAGAGTTGTAGGCACGTATATATGCCTGAACATTGATTACTAGTACTATTTTCATTCATATATCTTAATTTGGCTGTCTTTATTGCAGTGGACCTCCCGTTTCAAACGAGGGACAGAAGAGCAGTTTCCCTGAGAAGGACTTGCTGTTCAATGCAACAGGCTCCACCACCAGCATGGCCTGGTCGAGCCGTTGTTGAACCTGGGAGGAGGTCATGGGATGGCCCCAAGCCTATCTCAATTGTTGGCTCAACCGGTTCTATTGGCACACAGGTAAATGGAACATCAAGATCTAAGATTAACGGATGGAAATTAATACTCCATACCTTTTTTATATCTGTCAGTTGTGCTAGTACATCAATGTTTGGTCAATTAGTTCATCTAAGAGTAAATGTTTGACCTATTTATCTGATGATACGAGTTGACCCTTTCAAGATCAATCAACATGTCTTGAGCTATTCATTGAAATTAGTTGGACATGAAAATGCGACGTTTATATTCTGTGGTACTAATAGTGTTTTATCTTTTCTTTTCTTTGCATAACTTAAAAGACATTGGACATAGTTGCGGAGAATCCAGATAAATTCCGGGTTGTTGCTCTTGCTGCTGGCTCCAATGTGACTCTTCTAGCTGATCAGGTATAATGATTTTGTGAGGAAAATATCCCTTCTTTCGACCTTTCATGGTAGGATTATGGACATGAAAGTTAACTGAATATAGGTTGTTTAACTAAACAGGTGAAAACATTCAAACCAAAGCTTGTTGCTGTAAGAAATGAGTCATTAGTTGATGAGCTAAAGGAAGCCTTAGCTGATTGTGATTGGAAGCCAGAAATTATTCCTGGTGAGCAAGGTGTCATAGAGGTGAGTTTTTCATGTCATATTTATGTTTAAATAGCTGATGCTTTGCTGTGAATTTTATAAAGATTCAACTCTCATATAATAGGTTGCTCGCCACCCAGATGCAGTTACAGTTGTTACTGGGATAGTAGGGTGTGCAGGACTGAAGGTAATCTTTCTTTTTATATTGCATATTCTTTGCTCTGCTTCCTTTAATATTAGGTGTTAATATTACAAAAACTCAATTATTTCTTTGATGTTTCAACAAGTATATTCAAGAATTTATTGAGAAAGAAATGAAAATATATGTGCTTGAAAATTATATTCCCAGTGTTATATTACCATAACAACAGGCCATTTTAAACATATAGTACTGAAACACTTGGAATACATACGTTATTATGGTTACATGAATGTACTTGCAATTTTTCAAGGCGAGTATGTTTGAATTGGAAGAGCTCATGCCAAAACAGTCCTTTTGTAGAGTTGCTGATTATCTACTCAAAAGTGTCTAGCAATTTGAGATTTTTTTTAATAGAGTTCTGATGCACCAAAAAATAAAGTTTGATATGCAACAACTAAAACGGTAGTGGTACATATATCCTATTCTTATCTTGTAGAACATTCGTGCATGGACCGTTTTGTATATCAGGTCACCCATCATACCTTGATGATGCTACTTTTAGACTACTCAATATCTTGATCTTCTTTTTGGTACTTATTTCTTAAAAGTTTGATTTATCTAGACGAATGAGTTGTGTAGCCAAACGAAAGAATTGAATGCTTGCTGAAGTTCTGTATGCATGCAAACTACATTACCAGAATCTGGCACCACTTGCTGATTTGCCTACTTAAATTTCTTTGCTCTGCCAGCCTACAGTTGCTGCAATTGAAGCTGGGAAAGATATAGCATTGGCGAACAAAGAGACACTTATTGCAGGTGGTCCTTTTGTGCTTCCCCTTGCACAAAAGCACAAAGTGAAAATACTTCCTGCTGATTCTGAGCACTCTGCTATATTTCAGGTACCACAGAAAATAAATTACCTGTAACTAATTTTACTTGGTTCATCTGATATAAGTTTGGTGTAAGGTTGTGATAGTCTGGTACGTACTCAACGTTGCCTGTTCAAAAACCTCTTATACACTAGTGGCTTTATCTTTAACACTTAAACAAAGTAGCAGTAAGATGTATGTTGCTTGTTATAGTTTACTGTTGTTCTATTATATGCTGATTTGCAGTTTCCCTCTACTATCATAGTGTATACAAGGCTTGCCCGAAGGAGCACTTCGCCGCATTATTTTGACTGCATCAGGTGGTGCTTTCAGGTAAATCTACTGACATACATGTTATATATGTTTTTCTACTGGACATTGGACTCCATCTTATATCCATTGATGATGTCAGGGACTGGCCAGTTGACAAGTTGAAAGAAGTAAAAGTTGCTGATGCTTTAAAGCACCCGAACTGGAATATGGGGAAGAAGATTACTGTAGATTCTGCTACATTATTCAACAAGGTGTTTGCAGTAAACTTTCAGAATTTTACTGAGGTCATGTTGGCAGTATTTGCACTAAAATGATCACTTGATTCATACAGGGTTTAGAAGTTATTGAAGCACATTATTTATTTGGTGCTGAATACGATGACATTGAAATTGTGATCCACCCACAATCTATCATACACTCTATGATTGAAACCCAGGTGAGTCCTACAGCACAGCTATGGAAAATGTTTAGCGGTTATGCTCAACTGCAGTGGATTTTAAACTGTTAATGCATGCACACTTAATCCTGATATGGCAACCGTATTTTCATGTTTACGTTTGGCTTAATATTTTTTTTCAAGTATTCATGAAGTTCTGTTTCTCCAGGATTCATCTGTGTTGGCTCAACTGGGATGGCCAGATATGCGGATACCAATCTTATACACCATGTCTTGGCCAGACAGAATCTATTGCTCAGAGATCACCTGGCCCCGACTAGATCTTTGCAAGTACAGGCTCTTCCCTTAAATGCTGTGCTACTTTTGCATTACCACTGATAATTTTGTTCGAGAATGACCTCAAAGAATTTTAGCTTTCTTATTGTTATCGCATGGTTCTCTCATAGCCCACTCAGATTATCAGTAAGCTTGAGCAGCCATCCTATAACAGTTAATATGTGGATCTACTCTACTTAAATTCAATGAAGCTCGTATCGAACCTTCATACAAAGTTCAATGGATTGATTAAGTCCCTTTTGGCTGGTTGGTTACCAGTGATACGCAAGTAGTTAACGCTTGTAATGAATTATGCTTTGGTTGTTAGGCATGAACGCTGCTTCATGTTACTAGCTATATTTTGGGACGAAGGGAGTAGTAATAAATTTAAAGAATAAAAGGTTAATAAAGTAAAAGAACTAGATGCAACAAAAAATTGTTAAGTTATAGTACTTAACCGTGAAGACCTTTTTTCATTGCACGAAGGGTTAATTTTTAATTTGATAATGCAGGCTGGGTTCACTGACATTCAAAGCTCCTGACAATGTGAAATACCCGTCGATGGATCTCGCCTATGCAGCTGGAAGAGCTGGGGGCACCATGACAGGAGTTCTGAGTGCTGCTAATGAGAAGGCTGTGGAGTTGTTCATCGATGAAAAGTATGACACTCATCATCATCCCTTTTCCTCTTTCCATTGCATAGTGGATTCCATCGTCTGATTTTGTTTACGCACCTATTCTCTGCAATTTTAAAGGAGAATTATGTCCTGCTGATTGCAGCAATGCAGCAAAACGAATAACTGGTATCTACCAAAGTCCATAGATATCTCTTGCCCTTTGGAAAGTGCGAGCTGAAAGGAGAGAGCATACATGTCGTCAAAGCTAATATTCTCCGGCACTTTCTGAGCCTTAAGATATATCATGGATTATAATAAACCGACAACATCTTGATTGATGCTAGTAGGCCTGTTTATATATTGTAACTTGCTAGCTTAGCTGGGGGCTACCTATTGTTGTGAATGCCATGCTGTAGCCATGAGAAGTTGAAAAGAGAACACATGTCCTTAAAGCTTAAATATTCTCAGACACTTTCTGAGCCTTAATATCTATCATGGATCGTAAAAAACCAGCAACGTCTCAATTTATGCTAGTAGTAAAAGGCCTGATTAAACCTTGGAGCTTAGCTGGGGTACCTGTTCTTGCACTGTAGCCATCAGAAGGTAAGGTACCTGTTCTTGCACTGTAGCCATCAGAAGGTAAGTACCAAAATGGTATCCATTGGTGCAAAATAAAAGGTTTGTTTTTGTCGAAGGGCGAATTGTTTTCTAAATGGTGAATGGCTGACAACTTCATTGCAAGTTATTTAAACTGGTGAATTAATGTTTCCGCGGCTATTTCTTTGCAAGTAGACATTTTCCCGTCAGATAAACTTTACATATATATAAGCAAATGAATAGATGATTGTGGTTATGTTTTTGCAGGATCGGGTACCTGGACATTTTCAAGGTGGTGGAGCTGACATGCGACGCTCATCGGAATGAGCTAGTAACAAGGCCATCACTGGAGGAGATCATACATTATGATCTGTGGGCGAGGGAGTATGCTGCCAGCCTACAGCCATCCACTGGCCTCAGCCCTGTACCTGTCTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA002548

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA002548&oldid=40272"