BGIOSGA002576

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Gene Name

BGIOSGA002576

Description

Sphingosine 1-phosphate lyase

Definition

Oryza sativa Indica Group BGIOSGA002576, complete gene.

LocusTag

OS01G0100900

Ensembl Transcript ID

BGIOSGA002576-TA

Ensembl Protein ID

BGIOSGA002576-PA

Length

5265

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:62531..67795

Sequence Coding Region

62531..62727,62815..62860,63305..63456,63606..63665,64382..64606
,64680..64821,65064..65114,65222..65313,66107..66233
,66341..66356,66727..66834,66923..66977,67244..67390
,67491..67569,67673..67795

Genome Context

<gbrowseImage1> name=IndicaChromosome01:62531..67795 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:62531..67795 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGAGCTCGCCATGGATTTTGCGCTCCGCCTCCGCGACGCCGCCAACCACCACCTCTCCCGCTACGAGCCTCTCGTGCTCCTCGCCGCGCCCCTCCTCGCCCTCCTCGCTGCCCGCACCCTCCACGCCGCCGCTGCCGCCGTCGCCGACCGCGGTCTCCGCACCGTCCTCCTCGCTCTAGCCATGACAGCCATCAAGTTGCTTCCGGGAGTTAGCGCCTACATCAACGCTGAGAAGAGGAAGGTTGTTGACCAGCTGCAGTCAGGTGGCACGTCCACAAAAAGTACTCTGCGGACCGAGTTGCCAACTGTTGGGCTTTCCAACCAAGTGATAAACGATCTCGAAACACTGAAAGCTAGAGATGTAAACTGGCAGGGAAAATGCTCTGGCACAGTTTATATTGCTGGGAGTGAATCCGAAGGTCATTTTGCATTGATAAACAAGGCTTACTCTATGTTTTCACACACCAACCCACTTCACCAGGACGTATTCAAGAGTGTGGCACAATTAGAGGCTGAAGTAGTTGCAATGACAGCTGCTTTGCTTGGCATCAAAGAAAAATCATCCGGTGGACAGATTTGTGGTAATATGACATCGGGCGGAACTGAAAGCATATTATTAGCAGTAAAAACATCACGCGACTATATGCGAACAAAGAAGGGCATTACAAAGCCTGAAATGATAATTGCCGAATCAGCACATTCTGCATACGATAAAGCTGCTCAATATTTCAATATTAAAGTGCGGCGTGTGCCAGTGAACAAAGAGTTTCTTGCAGATGTGAAAGGATTCAAAAGGTGTATAAACGGAAATACGATAATGATGGTGGGGTCTGCACCAGGATTTCCTCATGGTTTAATTGATCCTATTGAGGAACTTGGGGAGTTGGCTTCACGATATGACATTTGCTTGCATGTTGATCTCTGCCTTGGTGGATTTGTATTGCCTTTCGCTCGTAAGCTTGGGTACCCTATTCCTCCATTCGACTTCTGTGTCAAGGGAGTTACATCAATCTCAACTGATGTTCATAAGTATGGATTAGCCCCAAAAGGGACAAGCATTGTCCTATATAAAAATCATGAAATTAGAAAGCATCAATTTGTTGCTGTTACTGAATGGACTGGTGGGCTCTATGTTTCACCTACTATTGCTGGAAGTAGGCCTGGTGGGTTGATAGCGGGAGCTTGGGCTGCTATGACGTCTCTTGGACTGAACGGTTATATGGAAAATACAGGTCATATCATGGAAGTGTCGAAGAAAATACAAAGAGGGATTGAAGATATCCCAGGGTTGTTTGTGATTGGAAAGCCAGACATGACTGTCGTGGCATTTGGCTCAGATTCGGTTGATATATTTGAGGTGAACGACATAATGTCATCAAAAGGCTGGCACCTTAATGCTCTGCAGAGACCCAACAGTTTACACATTTGTGTGACACTGCAGCACACGGTCATATATGAGGAATTCCTGAAGGATCTGAAAGATTCAGTGGACACTGTAAAAGCAAATCCAGGGCCTATTAGCGGGGGGCGAGCTCCGATTTACGGAGCTGCTGGCAAGATGCCGGACAGAGGCATGGTCAGGGAGCTGCTGGTGGAGTTCATGGACGCGTCTTGCTGA</cdnaseq>

Protein Sequence

<aaseq>MELAMDFALRLRDAANHHLSRYEPLVLLAAPLLALLAARTLHAAAAAVADRGLRTVLLALAMTAIKLLPGVSAYINAEKRKVVDQLQSGGTSTKSTLRTELPTVGLSNQVINDLETLKARDVNWQGKCSGTVYIAGSESEGHFALINKAYSMFSHTNPLHQDVFKSVAQLEAEVVAMTAALLGIKEKSSGGQICGNMTSGGTESILLAVKTSRDYMRTKKGITKPEMIIAESAHSAYDKAAQYFNIKVRRVPVNKEFLADVKGFKRCINGNTIMMVGSAPGFPHGLIDPIEELGELASRYDICLHVDLCLGGFVLPFARKLGYPIPPFDFCVKGVTSISTDVHKYGLAPKGTSIVLYKNHEIRKHQFVAVTEWTGGLYVSPTIAGSRPGGLIAGAWAAMTSLGLNGYMENTGHIMEVSKKIQRGIEDIPGLFVIGKPDMTVVAFGSDSVDIFEVNDIMSSKGWHLNALQRPNSLHICVTLQHTVIYEEFLKDLKDSVDTVKANPGPISGGRAPIYGAAGKMPDRGMVRELLVEFMDASC</aaseq>

Gene Sequence

<dnaseqindica>1..197#285..330#775..926#1076..1135#1852..2076#2150..2291#2534..2584#2692..2783#3577..3703#3811..3826#4197..4304#4393..4447#4714..4860#4961..5039#5143..5265#ATGGAGCTCGCCATGGATTTTGCGCTCCGCCTCCGCGACGCCGCCAACCACCACCTCTCCCGCTACGAGCCTCTCGTGCTCCTCGCCGCGCCCCTCCTCGCCCTCCTCGCTGCCCGCACCCTCCACGCCGCCGCTGCCGCCGTCGCCGACCGCGGTCTCCGCACCGTCCTCCTCGCTCTAGCCATGACAGCCATCAAGTAAGCTTTAATCGACTTCAATCTCCTCCTCTTTTCTTACTTGTTGCTGCTATTACTATTATTATCCGTTCATACATACACACGCAGGTTGCTTCCGGGAGTTAGCGCCTACATCAACGCTGAGAAGAGGAAGGTCAGCAGCACACGCATCTGAGTACCTCTTCAATTCTCTCTCTCCTTTTCTTGTAGTAATCGCTCGCTAGTGGCTTTTATTTTTAAAATGAAAAATAAAAATACTTTCTTTTCTACTCTACTCATTTTTTTACATATGCATATGCCTACCCTACATATGTTAAATTTTTTGCTTCATCTTTTTTTTTCTTTCCTATGGGAATGCTCCGTGGGTATTCAGATGCTACGTTCGTTCAGTTTGACATATGCAGCCGCGCGCATTAACTGGGAATGCTCGCGTGCACGCAACTCAGCCAGGCGTACCGTCTCTCTTATGATTGTGAATGCCATTGTGAATGCGATTGATTTAAGACCATGTTCATGTCAAAACAAAAATAAAAAAAAGTACTTCTACCTACATATCCCCGGATATCTCATTATTGGTGCTATACTTATATTGTAACAGGTTGTTGACCAGCTGCAGTCAGGTGGCACGTCCACAAAAAGTACTCTGCGGACCGAGTTGCCAACTGTTGGGCTTTCCAACCAAGTGATAAACGATCTCGAAACACTGAAAGCTAGAGATGTAAACTGGCAGGGAAAATGCTCTGGCACAGTGTATGTGCATCCCATTAATTCTCACACAAAATAAACCCAGTAAATTAAACGGTTCAATCATTCTATTGTGGTTCTTTTCGTTATGCTGTACACTCTACACATATTACTAGCATTCCGCATGTCAAATAACTTTTTTTTTAATATTGCAGTTATATTGCTGGGAGTGAATCCGAAGGTCATTTTGCATTGATAAACAAGGCTTACTCTATGTAAGACTTGGGATTTTGACCCTGTCTCAATCTCTATTTAAATAGAATATATAGACAATAATTGGTCACCATGTTTTCCAATAGGAGGGCGACTTAAGAAAGTATATAATAAAGTGTATTTATTGTTTTATTTATGCTCTGTTGCGTTGGTGGAAGAAAAAAAGTAATTTGCATAATTTTATTTTTTTCCCTAGGGAATACCGTCATAAAATTCATGTCAGCCTGTCTCAACTATCAAGATAAATAGTCCACTAGATTACTTCAAATGTATAGTAGGGAAACATATGTTCTTCCAGATTCAAACCAAGTGCCTCTGTTAGTATTTTGGTGAATTGACTTATTTATAACTCATATTTCAAAGTTACCATGTAGTCCCTCCATCCCAATTGATCATCATATATATTTATGCACCAAGACCAAAGATAATTTAAATCACATCAATCGAGACACCATGCACACATTCTCCCCACATACATGCATCGATTAAAACATCATGCCAATTACATCCTTAGCATGTACACATTCTCCCTTGCTACATTAATTGTATTCTGATGAAACCCGTGTCCATGCGGTTATGTAATGATCAATTTGAGAAATTTTGGATTTCATTATATGATGATCAATTTGGGAAGGAGGGAGTAACTTTTTCTAGTTTTTATAGGCCTCCATCTAATTTTAGGCTTCTAATTTACCATAAATATTCTTAATCCTTTCAGGTTTTCACACACCAACCCACTTCACCAGGACGTATTCAAGAGTGTGGCACAATTAGAGGCTGAAGTAGTTGCAATGACAGCTGCTTTGCTTGGCATCAAAGAAAAATCATCCGGTGGACAGATTTGTGGTAATATGACATCGGGCGGAACTGAAAGCATATTATTAGCAGTAAAAACATCACGCGACTATATGCGAACAAAGAAGGGCATTACAAAGCCTGAAATGTGAGATAAATGATGGATTATGTTATGCATTGTGATCACCTTATCTCCATGGTAATAAAGGCTTGTGATACAGGATAATTGCCGAATCAGCACATTCTGCATACGATAAAGCTGCTCAATATTTCAATATTAAAGTGCGGCGTGTGCCAGTGAACAAAGAGTTTCTTGCAGATGTGAAAGGATTCAAAAGGTGTATAAACGGAAATACGATAATGGTGAGATTTTATCCATATTCCTGTTTCTCTAGTTAGCTTAAAGCTGTTCTGATGCCTCCATTCACCTGAGATGAAAGATATTTGCATTTGTCTTTTCCTAAGGAAAGATTAGTATGTACCTTCTGACCCTGTGACCTTTTATAAGGAAAGATTAGTCTTTACCTTTACCTTCTTCCTACTCTTACATTTCTTAGTGTACATGTAAATATGTAAATGTTCCCTAACAATTTTCTGTTGCACAGATGGTGGGGTCTGCACCAGGATTTCCTCATGGTTTAATTGATCCTATTGAGGTATGTTAATCAATCATCGTTATGTTAAAGAAAACCAAAAATATTTTTTCCTACTGAAATTGCGCACTGCAAGTTCAGTGATTTCTTGTATCCCGGATCATCTTCAGGAACTTGGGGAGTTGGCTTCACGATATGACATTTGCTTGCATGTTGATCTCTGCCTTGGTGGATTTGTATTGCCTTTCGCTCGTAAGCTTGGGTACCTACTTACTTCATAACATGATATCTTACCATTATTATTAGCACTTGAGCAAATTTTGAATAGCTCGCCAATATACACATTTAATCATTTTCTTACAGCAACATGATGGTTTGCCTATTAATGATTGCTTTAATTTCAATAGAGGAGGTCTCAAACTGTCTACATAAGCAATTTGTTGATACCTGTATTATATTGCTTTTCACCTATAATCTTGGGTATTCCTTCATGACCATTCATTTGTTCCCTTTATCTGGATTTACTCGACTGTTCTCAGATGATGTTCTGATTTCTTATCAGTAATTTCAGCATTTGCATGAACTTTGAAGAACTTGCCAGAACATTACGTAATATTCACTTTTTTAATCATGTAACATGATGGTTTGCCTGTTAATGATTGTTTTAATTTTGTCCCGAACTGCCACCAACTGTGAACTAAAAACCCAAAGGTTATGGCCATGTATAACCACATATGGAACAAGTGTGTGCTTACTATCGCAATACCCAAGCTAATGTGAAGTGAACAAATATGCAAATTTTTGCTAATCCCTAGTCATAGATCAGGTCTGATGAATCTGGACTGGTTTAAAGCAATCTTATGATAGTTACTTATCTTAATGTTCATTTATGTCCCATTTATTGGTTTTAGATACTTGAAGTATATGTCTCTTTTGTTAGAAATGATGTGTTATAACTTCAATCATATATGGCATCCATTTTGTCAAGGCCATTGTTACATCTCTGATTGAACTAATGTTATGTGTACTAATTCTATGACTTCTCTGCAATACAGGTACCCTATTCCTCCATTCGACTTCTGTGTCAAGGGAGTTACATCAATCTCAACTGATGTTCATAAGTATGGATTAGCCCCAAAAGGGACAAGCATTGTCCTATATAAAAATCATGAAATTAGAAAGGTAAAAATAGCCTTGGAGTATTTTTCTCTTTACTTTTCTCAGATATTCTAACATTATTCCCTCCATCTATTTGGCACTGGCATCTTGGATACTACCACCAAATTCAGCATCAATTTGTTGCTGGTAAGCTTCAATCATTTCCTATGAAACTTCTCTCTTGAGTAAACCTTTTTAAGGGGTTCTCACTTCTCAATAAAATTTTGACCTCTATATTTATTCGACAGATATCATGGTTGTCGTTACATAACTATTACAGCTTAACAGATATGATCATGTTGCAAAACTGCACGAAAATGTTCAAACAGGGTAGAATATTTCTTACATGATTATGGTAACTTTGGTTGGAAGAACGTAGATTCATGCAATGCAAATGGTAGTTTGCGTCCTAGTAGCCCTTGGCTTACTTTCCACTATCTGACATGAGCAACGAATCTTGAACCAAAGTTTGAATAGTGGTTTAATGTGGGGATTTTGCTTCCTTATTTTTTTTCAGTTACTGAATGGACTGGTGGGCTCTATGTTTCACCTACTATTGCTGGAAGTAGGCCTGGTGGGTTGATAGCGGGAGCTTGGGCTGCTATGACGTCTCTTGGACTGAACGGTAACAGGTTTATTCAGAAGTTGACCAGTCCAGTGGTAGTTTAGTAGTGGAACAGTATTTCTAATGGATACTTGTGCTTGGTTTCCAGGTTATATGGAAAATACAGGTCATATCATGGAAGTGTCGAAGAAAATACAAAGAGGGTAAACTTGCCTGTTTATCATCCTTGGAAGCCTAGAGTATAAACATATATAAAGACTGACTACTGTGGTGTTTTGGTATCAGTTAGTTTGGGAAATTTTTTGAACAGAAGTGCCATTCACATCAATATTATTCCTCATAATTGTAGGGATGCACATTGTGTATAGTCAAATGGCAAACTTTAGATGCCCTTTCATGTAGATGTGCTGCATCTGAATTCTTGAGAGCACGTGTTTAAAGAGAGAAATGTATTGAATGCATTGCGCAGGATTGAAGATATCCCAGGGTTGTTTGTGATTGGAAAGCCAGACATGACTGTCGTGGCATTTGGCTCAGATTCGGTTGATATATTTGAGGTGAACGACATAATGTCATCAAAAGGCTGGCACCTTAATGCTCTGCAGAGACCCAACAGGTAAAACAAAAACATAGTCTGGTTTCAGATTCAGACAAATAACCATAGTGTAACGTATTTATGTACGAGTGTAGCCTGACGATGTTTTTTTCTGTTTCAGTTTACACATTTGTGTGACACTGCAGCACACGGTCATATATGAGGAATTCCTGAAGGATCTGAAAGATTCAGTGGACACTGTGAGTTACCAACATATGCATGTTTTGTCTTGATAGAGTAGTATATGATTGTAGTGAAGCTACTAAGGTAACTAATTTTTCTGTGTAAATTGCGATGCTGTAGGTAAAAGCAAATCCAGGGCCTATTAGCGGGGGGCGAGCTCCGATTTACGGAGCTGCTGGCAAGATGCCGGACAGAGGCATGGTCAGGGAGCTGCTGGTGGAGTTCATGGACGCGTCTTGCTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA002576

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA002576&oldid=40300"