BGIOSGA002600

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Revision as of 10:38, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA002600| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA002600, complete gene.| tag = OS01G01...")
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Gene Name

BGIOSGA002600

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA002600, complete gene.

LocusTag

OS01G0105700

Ensembl Transcript ID

BGIOSGA002600-TA

Ensembl Protein ID

BGIOSGA002600-PA

Length

3162

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:338247..341408

Sequence Coding Region

338247..338386,338896..339424,340487..340633,340749..340814,340908..340973
,341086..341160,341268..341408

Genome Context

<gbrowseImage1> name=IndicaChromosome01:338247..341408 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:338247..341408 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCCTCCTCCTCTTCCTCCTCCAGCCTCTGTGATAATCATCTCTTGCAAGATGACCTGATCCCATGGCCTTCCATGCCCTTTGCTCCTGCTCCCAACACCTTTGGATTGAACCACCAATGGAGCCAGCCTCCAATGCTAAGCAGCAGTACTGATCAGTTAAGCTCATATGAGCTTGAATCACTCCAATCAGTTGAAAGTCAGCTGGCAGCTGCTGCTCCTCCGACATTAAGCCCCCATCTGCAGGCTCATCAACTCAGCACGGTGCTAATGATGCAGGAGCTAGGGTTCCAATGGAGCAGCTGCGCTGCGCCAGCAGATCAACATAGTATTGCAAGCTCCACGAATAATAATAGTAATGTGATGATGAACGAGGAGGAGCTACGGCCACGTCCTGATCAATCCCTAATCAGCAATCCAAGGTCATGCAGCGCCACCACGCTTCTTCCTCCGCCGCATCTACATCTGGACGGCGCTGTGCTCCCGAGCATCAACGTCTCGCGGCTGCAGAAGCTGGCCGCCGGCGATGAGCCGCCGCAGATATGTTGCAAGAGGCAGGCTGCTGCTGCTGCAGTGGTCGGCCATAGCAGCATAAGAGATGAGCATGTGCCCTGCCCCTATGCTGGCCCTCCTGCTCATCTAATTCAAGGACCATCCAACACCCTGCAGATGAAGAGGAATACGAATGCAGCAGCTCAAGGGAGAGGTGGCCGCCATGGGAGTTCAACGGAGCACAGATCATCAACAGCGCTGCCGCCATCGTCAAAGAAGCCCCGGCTCGACTCACACTCCTCCTCAATGCTTCCTTCATTCAAGGTAAGGAAAGAGAAACTAGGGGATAGAATTGCCGCCCTTCAGCAACTGGTCTCACCCTTTGGTAAGACTGATACCGCATCGGTACTCATGGAGGCCATCGGTTACATCAAATTTCTTCAGGACCAAGTTGAGACTTTGAGCGGTCCATACCTGAGATCATCCAAGAACAGCAAGAAATTAGCCTGCAGGGCAGCACAACAACAACGGAAGGGGACGTCAAATGGAGGGGACGCAGCAGCAAAGCTTGACCTCCGAAGTAGAGGACTCTGCCTGGTGCCCCTGTCGTGCACCTCCTACGTCACCAACGAGAATGGGGTTTGGCCTCCACCCAATTTCAGAGGAAACTGA</cdnaseq>

Protein Sequence

<aaseq>MASSSSSSSLCDNHLLQDDLIPWPSMPFAPAPNTFGLNHQWSQPPMLSSSTDQLSSYELESLQSVESQLAAAAPPTLSPHLQAHQLSTVLMMQELGFQWSSCAAPADQHSIASSTNNNSNVMMNEEELRPRPDQSLISNPRSCSATTLLPPPHLHLDGAVLPSINVSRLQKLAAGDEPPQICCKRQAAAAAVVGHSSIRDEHVPCPYAGPPAHLIQGPSNTLQMKRNTNAAAQGRGGRHGSSTEHRSSTALPPSSKKPRLDSHSSSMLPSFKVRKEKLGDRIAALQQLVSPFGKTDTASVLMEAIGYIKFLQDQVETLSGPYLRSSKNSKKLACRAAQQQRKGTSNGGDAAAKLDLRSRGLCLVPLSCTSYVTNENGVWPPPNFRGN</aaseq>

Gene Sequence

<dnaseqindica>1..140#650..1178#2241..2387#2503..2568#2662..2727#2840..2914#3022..3162#ATGGCCTCCTCCTCTTCCTCCTCCAGCCTCTGTGATAATCATCTCTTGCAAGATGACCTGATCCCATGGCCTTCCATGCCCTTTGCTCCTGCTCCCAACACCTTTGGATTGAACCACCAATGGAGCCAGCCTCCAATGCTGTAAGATATATAGCTTTACACACACATACATATTTATATATAGATATAGTTTATTCATGCATCTTTTCTTTGAGTTGTTCATGCATATATGTTGTTCCCTCTGAAAAGGATCGAAAATGAAGTTATATGTATGTCTTTTGAGTTTGTATTGTAGATCATGCACCTGGGATTCCTAGGATTTGGATTTTCTTCTCTGGCTTCTTGTCTGCTACCTCCTTGTTCCTTCTGAGATTCTGGGGAATTGTAGCAAGCACAACAAAATGACAACTTCAGAGGAAACAATGTGTGCATTAATTATATTGGCAGCATGGATCTAGCTAGGCTTCTTGATTTGTTGGTTTCCTTGATGTAAAAAGCTTCCATCCGCTCGCATTACCTTTGTTCCTTTTGTCATGCATGATCAAGGTCTGTATATCTCATAATAATCTGGTAGATAGATGATACCAGTGATAATAACAAATTAAGTAATTAATATCTGACTCGATTTTCTTAATTTCTCTCTTGATCAGAAGCAGCAGTACTGATCAGTTAAGCTCATATGAGCTTGAATCACTCCAATCAGTTGAAAGTCAGCTGGCAGCTGCTGCTCCTCCGACATTAAGCCCCCATCTGCAGGCTCATCAACTCAGCACGGTGCTAATGATGCAGGAGCTAGGGTTCCAATGGAGCAGCTGCGCTGCGCCAGCAGATCAACATAGTATTGCAAGCTCCACGAATAATAATAGTAATGTGATGATGAACGAGGAGGAGCTACGGCCACGTCCTGATCAATCCCTAATCAGCAATCCAAGGTCATGCAGCGCCACCACGCTTCTTCCTCCGCCGCATCTACATCTGGACGGCGCTGTGCTCCCGAGCATCAACGTCTCGCGGCTGCAGAAGCTGGCCGCCGGCGATGAGCCGCCGCAGATATGTTGCAAGAGGCAGGCTGCTGCTGCTGCAGTGGTCGGCCATAGCAGCATAAGAGATGAGCATGTGCCCTGCCCCTATGCTGGCCCTCCTGCTCATCTAATTCAAGGACCATCCAACACCCTGCAGGTCAGTACATAATCACACCATTTATGCACTAGTTATACATTAATTAATCCAGCTGGCTAGCTTAATTAATTGCCTTCTCTTCTCATATAGTACATGGTCCTTGGAGGAGTACGTGCTAAACTGTCTGACTAACACTTAATTGTTACTGTAGACATATTGGAACTGATTAAGCTAATAATGGTGATAAGTGATAACCAAACTAGTAATTAGGAACATGCATGCATTTTCAGCCTATACTTACACATGCAAATACTTACACATCAGGCATGATGATAATTAACTTTTGTCTCTGTCATGATTGTGACATATCAGGTTTTGACGGATCTCGATACATACATATATATATTATCCTGCCATGGTCAAATATATGACGAAATTAATTAGCATTGACGGGCTAAAATGCATGAATCAGTATCTCGGAGTGCCAATTTGAAGTATATTCAGTAGTGCCCTTGTAAGACAGATACATATTTATATGCATTTGCCCTGATTCAGATGTCTCCAAGATATACTGTCAGCAAGCTAGCTAGCTAGCTTAATTAGCTTAACTGGTACGTAAGGGAACGATCTGCATGTCTTGGGCAGAGTAGAGAACAAGAGAACATGTTTGTGCTTGGCAAAAGCCTGTGAGTTGTTAATTGTAGGACCATTTGTCTGTAATGAACTGGGGACAGCATAAGCATATATGTGCAGCAAGCTTAGGTGACACAGCTGAAACAGTAGCAGCAAGCTAGCTAGTTAGGTAATTTTGCTTTCCCGGCCTGCCTGAACCAATTAGCTAGCTAGGCCCGGTCCATTCACAAAAAGTACAGCCTTTTGTTCTGCACATATGCAGCTTTTAAGGGTGACATGCGTCATCTTTTTGCCCCAAAAAGTACTGGTACTACATTGAACATGCATCAGTTGCAGCAACATGCATCCTGGACTGGAGTTGATCAGTGGTACTTCAGTTTGCAACACATAATTATATTTACTTGCAGTGATGAAACTAGCTTAATTACTTGGAAGCTCAATACGTAAGCAATTTAACAAGCAGGTCAATTTGCGTACCTACACATGCAGATGAAGAGGAATACGAATGCAGCAGCTCAAGGGAGAGGTGGCCGCCATGGGAGTTCAACGGAGCACAGATCATCAACAGCGCTGCCGCCATCGTCAAAGAAGCCCCGGCTCGACTCACACTCCTCCTCAATGCTTCCTTCATTCAAGGTCCGTATATATACATACAAAGATCGATCTGACCGATCGATGTTTGATCATTTATCTGCTCTGCATGAACATTGGACAATGGTAATGCATATCCTAATTCAACTAATTATTATAGGTAAGGAAAGAGAAACTAGGGGATAGAATTGCCGCCCTTCAGCAACTGGTCTCACCCTTTGGTAAGGTATGTAACAAACAATCAATGAATGCATTACCAGTTTCTGTAATTATATAATCACCCTTTGATAGAATTTGATTTTAAAATGATGAGATGCAGACTGATACCGCATCGGTACTCATGGAGGCCATCGGTTACATCAAATTTCTTCAGGACCAAGTTGAGGTATGTAACAATGCACATCTACCTGTGAATTAATCTTTGGCCTGAGCTGAGAATTAATTGTTCCTGTGCTGTTTTGCAAAAAAATAATAATAAAACATTGCAATGTAAGCAGACTTTGAGCGGTCCATACCTGAGATCATCCAAGAACAGCAAGAAATTAGCCTGCAGGGCAGCACAACAACAACGGGTAAAAAGATAAACTTTTCTGTTCATTTAGTTTCAGAAGAGAAATTAAAACTATGTTAACTGACCTGTCATGTGTGCTTGGTGTCAATTGATTAATTAATCAATTAGAAGGGGACGTCAAATGGAGGGGACGCAGCAGCAAAGCTTGACCTCCGAAGTAGAGGACTCTGCCTGGTGCCCCTGTCGTGCACCTCCTACGTCACCAACGAGAATGGGGTTTGGCCTCCACCCAATTTCAGAGGAAACTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA002600