BGIOSGA002625

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Revision as of 10:39, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA002625| Description = BGIOSGA002625| Definition = Oryza sativa Indica Group BGIOSGA002625, complete gene.| tag = | tid = BGIOSGA002625-TA|...")
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Gene Name

BGIOSGA002625

Description

BGIOSGA002625

Definition

Oryza sativa Indica Group BGIOSGA002625, complete gene.

LocusTag

'

Ensembl Transcript ID

BGIOSGA002625-TA

Ensembl Protein ID

BGIOSGA002625-PA

Length

2394

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:667548..669941

Sequence Coding Region

667548..667794,669128..669521,669625..669875,669931..669941

Genome Context

<gbrowseImage1> name=IndicaChromosome01:667548..669941 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:667548..669941 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGAGACGACGGAGGCGACGGCGGCGAGGGAGTTCTTCGCGAGGCTGGACGCGCAGCTGAACAAGGTGAACCACTTCTACAAGGCCAAGGAGGAGGAGTTCCTCCACAGAGGTCACTCCCTCCGGAAGCAGATGGACATACTCCTCGACCTCAAGTCGCGGTCGTCGTCGTCTCTCTCCGGCCACCACCGCGCCGCCGCCGGCGACGACCCCTCCATTTCTTCTTCTTCCGGCANCTCCGGCGCCGAGGATGAGTCCACGAGGTACGTGACGTCAGCAACAGACACGGACGAGAGCCAACACGAAACCGCGGTGATGAGAGACCCTGAAGAGCTTTCGGCTGAGCAGGGTCTAGAAGATTCTGGAAGCTTGTCAAGGCAGAGCCTAGGGAGGACAGTGAGCAGCTGCCAGAGGAAGAACCTGAAGATCAACATCCCCCTGACGACGCCATGCAGGACAATCTCTGCACTCACCGACCTCCTCCGGGACGATCTCGTCAGCCAGCCCAAGAACAAATGCGACTCTGACGCCGGCATCACGTTCACGACCATCAACGAGACGAAGCTCCGGCACGCCGAGAAGATGATCAAGGGCGCCTTCATCGAGCTCTACAAAGGTCTTGGATACCTCACAACCTACCGGAACCTGAACATGATGGCGTTCGTGAAGATCCTGAAGAAGTTCGAGAAGGTTAGCGGGAAGCAGGTGCTGTCTGTATACCTCAGGGCGGTGGAGAGCTCCTACTTCAACAGCTCCGGCGAGGCTCTGAAGCTGATGGACGAGGTGGAGGACGTGTTCGTCAGGCACTTCGCCGCCGGCAACAGGCGCAAGGCCATGAAGTACCTCAAGCCCACGCAACGGAAGGAGTCACACACTGTCACATTCTTCATCGTACCACTCTGA</cdnaseq>

Protein Sequence

<aaseq>METTEATAAREFFARLDAQLNKVNHFYKAKEEEFLHRGHSLRKQMDILLDLKSRSSSSLSGHHRAAAGDDPSISSSSGXSGAEDESTRYVTSATDTDESQHETAVMRDPEELSAEQGLEDSGSLSRQSLGRTVSSCQRKNLKINIPLTTPCRTISALTDLLRDDLVSQPKNKCDSDAGITFTTINETKLRHAEKMIKGAFIELYKGLGYLTTYRNLNMMAFVKILKKFEKVSGKQVLSVYLRAVESSYFNSSGEALKLMDEVEDVFVRHFAAGNRRKAMKYLKPTQRKESHTVTFFIVPL</aaseq>

Gene Sequence

<dnaseqindica>1..247#1581..1974#2078..2328#2384..2394#ATGGAGACGACGGAGGCGACGGCGGCGAGGGAGTTCTTCGCGAGGCTGGACGCGCAGCTGAACAAGGTGAACCACTTCTACAAGGCCAAGGAGGAGGAGTTCCTCCACAGAGGTCACTCCCTCCGGAAGCAGATGGACATACTCCTCGACCTCAAGTCGCGGTCGTCGTCGTCTCTCTCCGGCCACCACCGCGCCGCCGCCGGCGACGACCCCTCCATTTCTTCTTCTTCCGGCANCTCCGGCGCCGGTGAGCTACCTCTCTCTTTCTCTCTCTCCTGTAGTGACATGGTTAGTGGGAAGCTGGTGGTGAGAGAGAGGATGGAGATGAGCTAGCAGGTATTGTCATGCACGTAGGATCGCATTCGCAGCAACTAGCTTAGCTTAGCTTAATTACCCAACCCCATTTCATTTCATTTCATTTCATGGTACGTATGGTATTGGTACGTGCGTGAGCAGCTTGCCCGGGAATAATGGAATATCCTCCCCTGATCAATTGTGTGGATGTCTTTAATTACTTGCGTTTTTGTCTGCATATGGCACGACCATCATATCAACCTCAACATCCTACTTTACTTAGTGTCGCATCCTGTCCCTCCTGATAATACCTGGTATAGTAGTATTTATATATTCTTCTTTTTCTAAAGAGTACTTTTGCATAGGTATATATGCCGCGTACAGTTGACACTTTGACAATTACAAGCATATATAATTGTGTAGGTCGAGTTTAAAAAACTATATATATACTTTGACCAAACTATCATAAAACTATATTTAAATACCAAATTAATATATCACAAAACCATGCATGGATTTAATATGAAGTATCATAAAACTACATATCGACTTAGTAATGAAGTTATCATAAAACTACATATTTTAGAGTTTATATTTCTAGCAATATTATTCTGATGGAGTTATAAACATAGTCTAATTTTGGTGATAAGCTTAATGCTAAACCCTTGTGGCCTTTCCATGGTGTGGTTTAGATATGTACTTCCTCTTTGTTACCTATCATACGTCATTTTGATTTTTGAAGTCAAAGTTGTTTAAGTTTGATCCCATAGAAAAATATGACGATATTTTCGACTCGAAACAAAGAAACTATCTAAATATGTTCAATGTTATATGTAATGAAACTAATATGATGCTATAAGTATTGCTCTATTTTGGTGAAACTTGGTCAAATTTAAAAAGCCAAAACAAATTATAATATGAAACAGAATGAGTACTAACTAGTATGCGATTAGATATTTTCTAGTATTCAAATTTATTATATTAGGAAATATCTAATATCATACTAGGTAGTAACATTTTGAAAATGTGAAGTAGTTTTTCTATACTAAGGTCAAAGTATTTGTATTTTTGCAAAAGTTACTTTATATATGGAGATTCTTTTTTATGTCAATGCTATCCCCTCATTAATTCGAGAAGAATAACATGCAGATGACATCCATACATGAATATATGCCAAATTATGACAGCTATCTAAAATAATTCCCTCATGCAAAAAAATCTACAGTTCTATATAGTTCACTCAATATTAATTACTGATTTTTTTTTAAAAAAAAAACTCAAAACAGAGGATGAGTCCACGAGGTACGTGACGTCAGCAACAGACACGGACGAGAGCCAACACGAAACCGCGGTGATGAGAGACCCTGAAGAGCTTTCGGCTGAGCAGGGTCTAGAAGATTCTGGAAGCTTGTCAAGGCAGAGCCTAGGGAGGACAGTGAGCAGCTGCCAGAGGAAGAACCTGAAGATCAACATCCCCCTGACGACGCCATGCAGGACAATCTCTGCACTCACCGACCTCCTCCGGGACGATCTCGTCAGCCAGCCCAAGAACAAATGCGACTCTGACGCCGGCATCACGTTCACGACCATCAACGAGACGAAGCTCCGGCACGCCGAGAAGATGATCAAGGGCGCCTTCATCGAGCTCTACAAAGGTCTTGGATACCTCACAACCTACCGGTAATTTAATCAACTGCTAATCTGTCATCCTCTAGGAAATTCATGTGTGTTCAGTTCAGATTCAGAAGTTCAGAACTGTTTGTGTGATGTGAAATGCATGCAGGAACCTGAACATGATGGCGTTCGTGAAGATCCTGAAGAAGTTCGAGAAGGTTAGCGGGAAGCAGGTGCTGTCTGTATACCTCAGGGCGGTGGAGAGCTCCTACTTCAACAGCTCCGGCGAGGCTCTGAAGCTGATGGACGAGGTGGAGGACGTGTTCGTCAGGCACTTCGCCGCCGGCAACAGGCGCAAGGCCATGAAGTACCTCAAGCCCACGCAACGGAAGGAGTCACACACTGTCACATTCTTCATCGGTAAACCCAAACCAAGAATCTGCATGCAGTTTCCACTTTGCAATGACAATCTTAGTACCACTCTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA002625