BGIOSGA002684

From RiceWiki
Revision as of 10:40, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA002684| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA002684, complete gene.| tag = OsI_002...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA002684

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA002684, complete gene.

LocusTag

OsI_00213

Ensembl Transcript ID

BGIOSGA002684-TA

Ensembl Protein ID

BGIOSGA002684-PA

Length

4198

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:1737670..1741867

Sequence Coding Region

1737670..1739586,1739664..1739798,1739894..1740316,1740509..1740578,1740682..1740821
,1740946..1741005,1741102..1741257,1741598..1741867

Genome Context

<gbrowseImage1> name=IndicaChromosome01:1737670..1741867 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:1737670..1741867 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGAAAATCTACCAAATGGCTCAGCAAATATAGCTGAGAAGAACCAGGATAATGAGATGTCTACAGATGCTGGTGAGCCTGAAGAAGTAGCAGATATATTTATTTATAGAGAAGATGTTGTCAGCTTGAAGTCAAAAGAGGACACCCGTGGGTTGGTTTTGGAGGTAGCAGGAGAATATGATTCTGAAGGTAGCATCACTGATGATGATACTGATACTGAGGAGCATGAACACAAAAGTTCTCATAGGACTGAAAATGGTGGTGCTGATGGTGATAATGTCAGTAATGGAGTTGATGTTGATAGTCAGAGTTCATTGCCTGATAACAAGGTTAGGGTTCTATGGATTGATGGTGTCGAGAAGACGGAAGATATTGACAGCGTGGTTGTCATGGACAGAAGTTTCCTTCATGGAGATATAGTGGCTTCTGCCACAGATCCAACTGGTCAGATGGGACTTGTTGCTGATGTCAGCCTTGTGGTTGATTTGCAAGGACCTCACGGAGAAATAATAAAGGGAGTATCCTCTAAAGATTTGAGACGCATCAGGGAATTTAACGTAGGTGATTATGTTGTCTCTGGGCCATGGCTTGGTCGAGTCGACGAGGTGTTGGATAATGTTAATGTGTTATTTGATGACGGCTCCGTCTGTAAAGTAGCCAGGGCAGATCCTATGCGGCTAAGGCCAGCATTGGGGCCACTGAATCCAAATGCAAGCTGTCCCTTTTATCCTGGACAGCGTGTCAAGGCAGTGAATTCATCTGTTTACAAAACATCCAGGTGGCTCAATGGACTATGGAAAGCAAGTCGTCTTGAAGGCACTGTCACAAAGGTGGAAACAGTTGCAGTTATAGTCTATTGGATTGCATCTGCACACTTTGCCACGAATCAAGAATCTGTTCCTCCTGAAGAGCAGAACCCAAAGGATCTGACTCTTTTATCTTGTTTTTCATATGCAAATTGGCAATTAACTGATTGGTGTCTTCCTAACCAATACACATCATCGTGTACTGATGATTCTTTGATTGAAAGTTCAGAAATAAAAGACTCTGATGACATTCCTGAATCCAGTGATGTTAAGACAGAACTAACGCAGAAGACTGATATGGATGAAAACCCTGGGAGGATGGATGGAGATTCTTCTGCTGATGGATCAAATATGGTTTATGAAGATAACACATGCTTAGCCAAACAATCAGAATCAGGCACTATTGCATCAACCGTTCCAAAGGAGGGATCACAGGACAATGCAACTTACAGGAAAAAACTTAGGAAAGTTTTTGTCAAAAAGGATAAAAGAACAAGAAGAAGAGACGAGAGCTTTGAAAGGGCTCTGCTTATTGCAAATACATACACGAAGGTTGATGTGATCTGGCAAGATGGGACAAAAGAATGTGGAGCAAGCTCAACATTGCTCATCCCGATCCACAGTCCAAATGACCATGAATTCTTTCCGGAGCAGTATGTCGTGGACAAGGTTGGTAATGATGTTGATGATTCTTCTGAAACAAAACGTGTGGGTCTTGTTAGAAGTGTTAATGCAAAGGACCGAACTGCATCTGTATCATGGTTTAAGCCTTCATTACACCCAGAGGAGCCCAGAGAAATCGAGTGCAATGAAATTGTGAGTGCATATGAATTGGATGGCCATCCAGATTATGATTATTGCTATGGAGATGTTGTTGTTCGCTTGCCATCTGTTTCACTGCCTGTTGAATCAACCAATAGGGAGAACACCATGGAACTGGATAATGTAAATTCTACAGAAGTATCGGCAACCCCTGTAGCTGATGCAGAGGAACAGTTTCCACAGAAGGAATCCAGTTTGGAATTTACTAGCCTTTCATGGGCTGGTAATATAGTTGGTTTTGAAGACGGTGATATTATAGTCATTTGGGGCGATGGTTCAGTGTCAAAGGTTGGTCCACATGAAATATATGTTGTTGGTCGTGAAGATGATGGTGCCTCACTAGATGATGGAACTGCCAGTGATGGTGCTAGCTGGGAGACTGTTGATGACAATCAAACGGATTTGCCTGATGATTCTGCACAGGATGATTCGCAAAATGTAGCAGATAGTAACATCGAAAGGGAAAACGGTTCATTTAATTCGCAGGATGGAAGCTCTGTTGCAACTGGTCCACTTTCTGTTGCTTTTGGCTTTGTGACTCGGCTCGCGAGTGAACTCTTTGCTCGAGGTAAAAAGCATTTAGATGGATCAAACTCAGATGCTATGGATGAAGTTGAATCTCACCAGTCTAATGAGATTTCAGAATCTGGTGATGATATTGATAAAGCTGAGGGGGAGAACAATGTGGCAACATCTGAGAGTACCGTTGTAACAACAAATGACGCTTCCGGTGGGAAGTCTGTAGATGTTGATATGGCTGACAAGCCTGGAGATTCAGATGGCTTCAAACACTTTGATGTTCAGCAGTGCCCTCCAGACCATCATTACCTGGAAAACATGGCGCAGGGCACTGGTGGAAGAAAGTGGGTAAAAAAGGTACAGCAGGAATGGAACATACTTGAGAAAAATCTACCAGATTATATTTATGTTAGGGTATTTGAGGATCGAATGGACCTCATAAGAGCCGTGATTATTGGAGCAAGTGGAACACCATACCAAGATGGTCTTTTCTTCTTCGACTTCCACCTTCCACCTGAGTTTCCACAAGTTCCTCCGTCGGCGTACTATCATTCTGGAGGTTTGCGCGTAAATCCAAACCTGTATGTGGATGGGAAGGGCTTGGTTCTAAATGAAAAGCCTTATTTTAATGAAGCTGGCTATGAGAAGCAAGTTGGTACTGTTGAAGGGGAGAAGAATGCATTGCCATATAATGAGAACACATATCTGCTGAGCTTGAAATCCATGTTGTATATCCTGAGGCGACCTCCAATGCATTTCGAGGACTTTGCAAAGAGCCACTTCTCCAAGCGTGGCAAATACATTCTCAAAGCTTGTGAGGCCTATTTGCAAGGTAATGGGGTTGGGACGCTCACAGATGATGCCTGCACCACCGAGAGAAGCAAAGAACAGCCATGCTCGGTGGGTTTCAAACTCGCATTAGCAAAAATTATGCCACGGTTGATTACTGCCCTGAAGGACGCTGGAGCAAATTGTGACCAATATGAGCACCTTGGGAAAACGGAAACTGCTCAAGAACACTGA</cdnaseq>

Protein Sequence

<aaseq>MENLPNGSANIAEKNQDNEMSTDAGEPEEVADIFIYREDVVSLKSKEDTRGLVLEVAGEYDSEGSITDDDTDTEEHEHKSSHRTENGGADGDNVSNGVDVDSQSSLPDNKVRVLWIDGVEKTEDIDSVVVMDRSFLHGDIVASATDPTGQMGLVADVSLVVDLQGPHGEIIKGVSSKDLRRIREFNVGDYVVSGPWLGRVDEVLDNVNVLFDDGSVCKVARADPMRLRPALGPLNPNASCPFYPGQRVKAVNSSVYKTSRWLNGLWKASRLEGTVTKVETVAVIVYWIASAHFATNQESVPPEEQNPKDLTLLSCFSYANWQLTDWCLPNQYTSSCTDDSLIESSEIKDSDDIPESSDVKTELTQKTDMDENPGRMDGDSSADGSNMVYEDNTCLAKQSESGTIASTVPKEGSQDNATYRKKLRKVFVKKDKRTRRRDESFERALLIANTYTKVDVIWQDGTKECGASSTLLIPIHSPNDHEFFPEQYVVDKVGNDVDDSSETKRVGLVRSVNAKDRTASVSWFKPSLHPEEPREIECNEIVSAYELDGHPDYDYCYGDVVVRLPSVSLPVESTNRENTMELDNVNSTEVSATPVADAEEQFPQKESSLEFTSLSWAGNIVGFEDGDIIVIWGDGSVSKVGPHEIYVVGREDDGASLDDGTASDGASWETVDDNQTDLPDDSAQDDSQNVADSNIERENGSFNSQDGSSVATGPLSVAFGFVTRLASELFARGKKHLDGSNSDAMDEVESHQSNEISESGDDIDKAEGENNVATSESTVVTTNDASGGKSVDVDMADKPGDSDGFKHFDVQQCPPDHHYLENMAQGTGGRKWVKKVQQEWNILEKNLPDYIYVRVFEDRMDLIRAVIIGASGTPYQDGLFFFDFHLPPEFPQVPPSAYYHSGGLRVNPNLYVDGKGLVLNEKPYFNEAGYEKQVGTVEGEKNALPYNENTYLLSLKSMLYILRRPPMHFEDFAKSHFSKRGKYILKACEAYLQGNGVGTLTDDACTTERSKEQPCSVGFKLALAKIMPRLITALKDAGANCDQYEHLGKTETAQEH</aaseq>

Gene Sequence

<dnaseqindica>1..1917#1995..2129#2225..2647#2840..2909#3013..3152#3277..3336#3433..3588#3929..4198#ATGGAAAATCTACCAAATGGCTCAGCAAATATAGCTGAGAAGAACCAGGATAATGAGATGTCTACAGATGCTGGTGAGCCTGAAGAAGTAGCAGATATATTTATTTATAGAGAAGATGTTGTCAGCTTGAAGTCAAAAGAGGACACCCGTGGGTTGGTTTTGGAGGTAGCAGGAGAATATGATTCTGAAGGTAGCATCACTGATGATGATACTGATACTGAGGAGCATGAACACAAAAGTTCTCATAGGACTGAAAATGGTGGTGCTGATGGTGATAATGTCAGTAATGGAGTTGATGTTGATAGTCAGAGTTCATTGCCTGATAACAAGGTTAGGGTTCTATGGATTGATGGTGTCGAGAAGACGGAAGATATTGACAGCGTGGTTGTCATGGACAGAAGTTTCCTTCATGGAGATATAGTGGCTTCTGCCACAGATCCAACTGGTCAGATGGGACTTGTTGCTGATGTCAGCCTTGTGGTTGATTTGCAAGGACCTCACGGAGAAATAATAAAGGGAGTATCCTCTAAAGATTTGAGACGCATCAGGGAATTTAACGTAGGTGATTATGTTGTCTCTGGGCCATGGCTTGGTCGAGTCGACGAGGTGTTGGATAATGTTAATGTGTTATTTGATGACGGCTCCGTCTGTAAAGTAGCCAGGGCAGATCCTATGCGGCTAAGGCCAGCATTGGGGCCACTGAATCCAAATGCAAGCTGTCCCTTTTATCCTGGACAGCGTGTCAAGGCAGTGAATTCATCTGTTTACAAAACATCCAGGTGGCTCAATGGACTATGGAAAGCAAGTCGTCTTGAAGGCACTGTCACAAAGGTGGAAACAGTTGCAGTTATAGTCTATTGGATTGCATCTGCACACTTTGCCACGAATCAAGAATCTGTTCCTCCTGAAGAGCAGAACCCAAAGGATCTGACTCTTTTATCTTGTTTTTCATATGCAAATTGGCAATTAACTGATTGGTGTCTTCCTAACCAATACACATCATCGTGTACTGATGATTCTTTGATTGAAAGTTCAGAAATAAAAGACTCTGATGACATTCCTGAATCCAGTGATGTTAAGACAGAACTAACGCAGAAGACTGATATGGATGAAAACCCTGGGAGGATGGATGGAGATTCTTCTGCTGATGGATCAAATATGGTTTATGAAGATAACACATGCTTAGCCAAACAATCAGAATCAGGCACTATTGCATCAACCGTTCCAAAGGAGGGATCACAGGACAATGCAACTTACAGGAAAAAACTTAGGAAAGTTTTTGTCAAAAAGGATAAAAGAACAAGAAGAAGAGACGAGAGCTTTGAAAGGGCTCTGCTTATTGCAAATACATACACGAAGGTTGATGTGATCTGGCAAGATGGGACAAAAGAATGTGGAGCAAGCTCAACATTGCTCATCCCGATCCACAGTCCAAATGACCATGAATTCTTTCCGGAGCAGTATGTCGTGGACAAGGTTGGTAATGATGTTGATGATTCTTCTGAAACAAAACGTGTGGGTCTTGTTAGAAGTGTTAATGCAAAGGACCGAACTGCATCTGTATCATGGTTTAAGCCTTCATTACACCCAGAGGAGCCCAGAGAAATCGAGTGCAATGAAATTGTGAGTGCATATGAATTGGATGGCCATCCAGATTATGATTATTGCTATGGAGATGTTGTTGTTCGCTTGCCATCTGTTTCACTGCCTGTTGAATCAACCAATAGGGAGAACACCATGGAACTGGATAATGTAAATTCTACAGAAGTATCGGCAACCCCTGTAGCTGATGCAGAGGAACAGTTTCCACAGAAGGAATCCAGTTTGGAATTTACTAGCCTTTCATGGGCTGGTAATATAGTTGGTTTTGAAGACGGTGATATTATAGTCATTTGGGGCGATGGTTCAGTGTCAAAGGTAATTCCTTAACATCTATTAATGCTGAAAATAGCATTTAGTTCCAAAACTAACTTCATTTCCTGTTGTTTTTTCAGGTTGGTCCACATGAAATATATGTTGTTGGTCGTGAAGATGATGGTGCCTCACTAGATGATGGAACTGCCAGTGATGGTGCTAGCTGGGAGACTGTTGATGACAATCAAACGGATTTGCCTGATGATTCTGCACAGGTATTATCTGTCTGCATCTATTGTTGTTTTGCCCAGCCATTCCTTTCCTGAAGTACCTTTTAGTTTCATTTGTTGATCGCTGCATTCTGTTTCAGGATGATTCGCAAAATGTAGCAGATAGTAACATCGAAAGGGAAAACGGTTCATTTAATTCGCAGGATGGAAGCTCTGTTGCAACTGGTCCACTTTCTGTTGCTTTTGGCTTTGTGACTCGGCTCGCGAGTGAACTCTTTGCTCGAGGTAAAAAGCATTTAGATGGATCAAACTCAGATGCTATGGATGAAGTTGAATCTCACCAGTCTAATGAGATTTCAGAATCTGGTGATGATATTGATAAAGCTGAGGGGGAGAACAATGTGGCAACATCTGAGAGTACCGTTGTAACAACAAATGACGCTTCCGGTGGGAAGTCTGTAGATGTTGATATGGCTGACAAGCCTGGAGATTCAGATGGCTTCAAACACTTTGATGTTCAGCAGTGCCCTCCAGACCATCATTACCTGGAAAACATGGCGCAGGTAAAATTTTATTACATGACATGTATATTATGGTGTTGTTAAATGTCCATATATTAGTAACACTCCTATTGCATTTTTTGGAAGGACCTTCTTGCAAGAGCCGATTATACCCACAGTTTTTTTTGACCATTTTAATATTTTGTTGGTTATTTAGATTTCTTGCTTATAAATAGCTAATAAATGCTGTAGCAGGGCACTGGTGGAAGAAAGTGGGTAAAAAAGGTACAGCAGGAATGGAACATACTTGAGAAAAATCTACCAGGTTTGCCATGCTTCCTCCGGTTTAACCTCATTCAAATGCTAATAAAAAGATTGTACACAACCATATTGTGATCTGACTGATGTTAGTTTTACTGCAATTGTAGATTATATTTATGTTAGGGTATTTGAGGATCGAATGGACCTCATAAGAGCCGTGATTATTGGAGCAAGTGGAACACCATACCAAGATGGTCTTTTCTTCTTCGACTTCCACCTTCCACCTGAGTTTCCACAAGTTCCTCCGGTAATTGACAATTACATTGCCTTACTGTCCATCTTTTATTTTCATCTTTATTTTTCTTATCATATCTGCTGGTAATTTTTTACATATGTAAATGAGCTCCTTTCATTTGTTACCAAATCTGCAGTCGGCGTACTATCATTCTGGAGGTTTGCGCGTAAATCCAAACCTGTATGTGGATGGGAAGGTCTGCTTAAGTCTCTTGAATACCTGGACGGGCAGAGGGAATGAAGTATGGGATCCATCATCATCCAGTATTCTCCAAGTCCTGGTTTCACTTCAGGGCTTGGTTCTAAATGAAAAGCCTTATTTTAATGAAGCTGGCTATGAGAAGCAAGTTGGTACTGTTGAAGGGGAGAAGAATGCATTGCCATATAATGAGAACACATATCTGCTGAGCTTGAAATCCATGTTGTATATCCTGAGGCGACCTCCAATGGTAACACAGCTCTTCCCTCTTCGAGAGCTATTTCATTTATATTATTCTCAGATATTTTCTCTTTCCAACTTGAGCCTTTGTTTATCATAAGCCAGATACATGCATGTTAGATCAACATGTCTATATCTTTATGTAGTTTATTTTGGATGCTAAATCCTGAATCAGACATTCATTCCATTGTTCCCATTGCAATCCGTGATTCTTCTAGCAGACACAGCAAGAATTTGCATTGCCATATAGTAAAACTAACTCTTTACTATGCTAGTAGCATAAAGATGCTTAACTATACCTTTTTTACAATCTTTTGATCTTCTGATTGTTTAATGTACTATTGATGCAGCATTTCGAGGACTTTGCAAAGAGCCACTTCTCCAAGCGTGGCAAATACATTCTCAAAGCTTGTGAGGCCTATTTGCAAGGTAATGGGGTTGGGACGCTCACAGATGATGCCTGCACCACCGAGAGAAGCAAAGAACAGCCATGCTCGGTGGGTTTCAAACTCGCATTAGCAAAAATTATGCCACGGTTGATTACTGCCCTGAAGGACGCTGGAGCAAATTGTGACCAATATGAGCACCTTGGGAAAACGGAAACTGCTCAAGAACACTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA002684