BGIOSGA002845

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Revision as of 10:42, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA002845| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA002845, complete gene.| tag = OsI_005...")
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Gene Name

BGIOSGA002845

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA002845, complete gene.

LocusTag

OsI_00529

Ensembl Transcript ID

BGIOSGA002845-TA

Ensembl Protein ID

BGIOSGA002845-PA

Length

6494

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:3761248..3767741

Sequence Coding Region

3761248..3761319,3762152..3762231,3762753..3762831,3763183..3763264,3763661..3763817
,3764353..3764443,3764588..3764671,3765064..3765110,3765674..3765802
,3766617..3766701,3767123..3767203,3767736..3767741

Genome Context

<gbrowseImage1> name=IndicaChromosome01:3761248..3767741 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:3761248..3767741 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGTCGCGGTCCCTGAGCATGAGGTCGTCGATGAGCATGAGGTCGCGCCGCGACCTGCCTCCTCCCCAGCAGACAATCGAAAAGCTTGAGAATATGGTGGCTGAAGGAAATTATTATGAAGCCCAACAAATGTACAAGTCAACCGGTGCAAGGTATATTGCTGCTCAGAAGTATTTGGAAGCCTTGGACATCCTTCAGTCAGGAGCTTTAGTTCAACTGAAGCATGGGCAGGTAACTTGTGGTGGTGAACTTGCTATAATGTTTGTGGACACCCTTGTCAAGGCAGCGCTTCCTTATAATGAAGAAACCTTTGATCGTATCAGAAAGATGTACAGCGCCTTCCCCAGGATATCTGTTCCACACTTCCTTGGAGATGATTATGATGACGACGGGCAGAAATTATCCGAAGCTATTTCTGCAGCAAAAGTGCGTTCTGAGAGTTGTTCATCATTCCTGAGAGCTGCTATCAGGTGGTCTGCTGAGGTTGGGGCATCAAGAAGTGGATCTCCTGAGCTGCATGTTATGTTGGCGGAATACATATATTCTGAATCTCCAGAAACGGACATGACTAAAGTGTCAAGTCATTTTGTGAGGGGAAATGATCCTAAAAAGTTTGCCTCTATGCTGGCGAACTTTATGGGAAAGTGCTACCCTGGTGAAGATGATACTGCAATAGCACGTGGTGTCCTAATGTATCTATCACAAGGGAATCTTAGGGATGCAAATTTGCTCATGGACGAGCTGAAGGATCAACTAAAATCTGCTGACTTGGAAATCCCCAAAACAGATTTAATTCAGTTCATCAAGTATCTCTTACCGACGCTCGAAAGAGATGCTTACCCTCTTTTCAGGACACTGCGGCAGAAGTACAAGACAAGTACAGATCGCGAGGCTGTATTTGAGGAGTTATTAGATGAAATAGCCGCAAAATTTTATGGAATACGGAGCCAGAGCGCTTTGGAAGGACTTTTTGGTGATATGTTCAGGGTATAA</cdnaseq>

Protein Sequence

<aaseq>MSRSLSMRSSMSMRSRRDLPPPQQTIEKLENMVAEGNYYEAQQMYKSTGARYIAAQKYLEALDILQSGALVQLKHGQVTCGGELAIMFVDTLVKAALPYNEETFDRIRKMYSAFPRISVPHFLGDDYDDDGQKLSEAISAAKVRSESCSSFLRAAIRWSAEVGASRSGSPELHVMLAEYIYSESPETDMTKVSSHFVRGNDPKKFASMLANFMGKCYPGEDDTAIARGVLMYLSQGNLRDANLLMDELKDQLKSADLEIPKTDLIQFIKYLLPTLERDAYPLFRTLRQKYKTSTDREAVFEELLDEIAAKFYGIRSQSALEGLFGDMFRV</aaseq>

Gene Sequence

<dnaseqindica>1..72#905..984#1506..1584#1936..2017#2414..2570#3106..3196#3341..3424#3817..3863#4427..4555#5370..5454#5876..5956#6489..6494#ATGTCGCGGTCCCTGAGCATGAGGTCGTCGATGAGCATGAGGTCGCGCCGCGACCTGCCTCCTCCCCAGCAGGTGAGGGATCCCTCCTCTCCCCGTGCCTTGGGTATTGCGAGTGTAACATTTGCGCGAGGGGGCGCGGGATTCGCTGTTGCGTGCGCGATGCGCTAGTTTGATCTCGTGTTTTTCGACCTTGGGGCGTAGAGGGGCGAGGGGGTCGATTACCCGACTCTTCGTGGCGAGTTTGAGGAAACTAGGGTTCAGTACCGAATCATGTCCAATTGCGAATCTCGCCATTTTATTGTGTGGAACTAATAGCTGGAAAAATCAATCGTCATATTTCTAAGAAAAATTAAGATTACTTATTGTGGTTTGATGATGATAAAAAAAAGGCATCAATGATTTACTCTCCGCAGTCCGCGCCACCTGGTTGTGCGCATAATCACTAGGGCCTTGTTCGGTTACGCCCGGATTCAATCCAGGCCGGGAATGACAAGTACAGTAAGAAATTTGTGATAGATGCAATGAGAGACCGGGAATTATTCCGGGCCGGGAGCCAATTTACTCATGATAGAGACAATAAGAGACCGGGAATCAATCCACTAGTCAAGAGGTGTGGAACTAATCCGGATGTTTTGTTGTCCCTATCATGAGTAAATTAGTTCCCGGCCCGGAAAAATCCCGGCCTCTCATTGTATCTATCATAAATTTCTTATTATACTTGTCATTCCTGGCCCGGATTGAATCCGGACGTAACCGAACAAGGCCTAGCTGTGGGTATACCTGGTTTGGATCCTCTTTGAAGTGTTCCCAGTCCCAGCATGGTTCCTCATACCCTTCTTTGACAACATTGAGTATATTTCACCCTTTGGATTGATGTTTGTAACCGTGAGGTGTTTGTTTTCAGACAATCGAAAAGCTTGAGAATATGGTGGCTGAAGGAAATTATTATGAAGCCCAACAAATGTACAAGTCAACCGGTGCAAGGTACTCTGTAAATAATTTAACTGAAGCCACAATGATTGATTCCCCTTTAACTTGCATTTGACCATCTTCCTTATGGTTGTCTATTTCAGAACTGCTTAGCATATGATAGAAATCAACCATTCACTTTTTATAACTTAAATTGGATCTGCTAAATAATATGAGTTGGTTGAATTTAGAATCTTTGTTATACAATCTTCCGTCTATTATCATAGTTATTTGGCTAATGCAGCATCTTAAAAATAGTTAATGTCAGGATTGTTAGGACATTAAACAAATTCAAAGTAAAACAATGACCAGAATGTTTACATTTGCATAGAAGCATTATTACTGGATCCTACAAGTATGTTTCATATGATCACAATGAAAAATGTTATTCATGCACAAAATGGCTATTTTCTTTGACTAGATTTATTGATTTCTTAATAAAGGAAAGGGGCATGAGCTTTGTCTGAAAGATATTGTAGACAAAAAGTGCCAATTCAGGAATACAATTTTGATTAATTGTGTCTCATATCTTGCAGGTATATTGCTGCTCAGAAGTATTTGGAAGCCTTGGACATCCTTCAGTCAGGAGCTTTAGTTCAACTGAAGCATGGGCAGGTTCTATCAAAGCTAAATTTCATAGATCTAAGTAAAAAAAAATATTCGCTACATTTGATGGCAAAGTAACACCCCTCCCAAAAGAAAAGAGAAGAGAGAGCCAACCAAAAGCTCATTGCTCCCTTCGTAACGATTTGTTGCAACCAGCCAATGGACCTTGACGTGTTCATTTGAAGTTGTTTTTTTAATGTGTGTATTGTCGATGTGGTGGTAGTGATTCACATCTTATTATGGGATGTTTTTATTGGGTACTATGCTGTAGTTACATACATGTGTTATCCTAGATTGGTGTTTTATATCATTTTAAACCTTCACATTTTTGCCTTATTGGTTAAAAATTCCTGATTTCAGGTAACTTGTGGTGGTGAACTTGCTATAATGTTTGTGGACACCCTTGTCAAGGCAGCGCTTCCTTATAATGAAGAAACCTTTGGTCAGTCTTCTCTCATAGTGAAAAGCTACTATTTCTTTATATCATTAACATGCTAATAAATTGCATATTTATCCTGTAAGTAAATACACATCTAGATTTCATTTTTGGAACATATTTACAATATTTTATTTGTAGCATGCTCCTAATGTCCATCACATGTAAAGTTTTGAAGAATCAAAGCTGTTTAAAATGTTAGTGGAAGCAGTGTTTACTAGTCCTAATTGTGGCTCTAGCTTTACTTTGTCTTCTCTTTATTTGTTTACCTTCAGAAGATCACTTTTCCCTTAGATTTTAATTGAATTGAATAAGATACTTACTTTATTATGAATGAGAACATGTTTCTAGTTTGATTTGTTAGTATCACATTTTGTGATTGTAACTATATGTAAACCTTAGATCGTATCAGAAAGATGTACAGCGCCTTCCCCAGGATATCTGTTCCACACTTCCTTGGAGATGATTATGATGACGACGGGCAGAAATTATCCGAAGCTATTTCTGCAGCAAAAGTGCGTTCTGAGAGTTGTTCATCATTCCTGAGAGCTGCTATCAGGTAAGGTTGTACTAATTTTCATTAATCCAAGTAAATTGAGTAGAAAAACTAAATATCCTTCATGCAAGCATCAAACATCTTCATCTAAACATGGCAGTTTGTTTAAGTGGATCTTAAGGCAAATACATCAAACTGTTGAATAGCATCTAATACTATGACCAGGACTTGTTAACTGTAGTGCTTGACCAGTAGTTCATTACTGACAAAAGTAGAACAGACAATTGAGCTTATCATGATGGTAAAAACAAATGATCTGTTCTCGTTGCTCACTTGCATATAAAAATCCAGACGTTGATTGTGTAAGTTTGTTTATTACAATAATGCTCTCAGAAAAAAAATGAAAAAGGAGATGGTCATGAATTTGTGATTTTAAGATGAACTCAAGGTGTGCAACATATAAGAATCATTTCCATGGGATCTTTGAATCTTTATGTTTAACTCTGTTAATGGACAATGTGGTCATCTAGTTGACTCTTCTCAATTTTCTGCCTGCTATATTTATATGCCACTAATAGCATATCAATCCTTTATTAAGGTGGTCTGCTGAGGTTGGGGCATCAAGAAGTGGATCTCCTGAGCTGCATGTTATGTTGGCGGAATACATATATTCTGAATCTCCAGAAACGGTACTGTTTATAAATTATAGAACTATTTTTCTGACATGAATATATTGTGTTTGTTTTAGAGCTGAAACTTTATGTCTTTTCAACTGTTACTCTTTAATGCCTTTGTGGTTTGCTAAGGTTCGTGTTGACTGCCGTTGGATGCAGGACATGACTAAAGTGTCAAGTCATTTTGTGAGGGGAAATGATCCTAAAAAGTTTGCCTCTATGCTGGCGAACTTTATGGGAAAGGTAATGGTTTTTAGAAAATAATTGATAATAGACTTGCAGATGATGATTGTCTAATGCCAAATTCTATTGAACTGTTACATTCTTCTGTTCTCTGAGCAATGATTAAAATGTCTTATCTGAATATGATCAGTAGGTTCACATTCTTTACAACAATTTTCTTTTTACAACGGGTCTCTTGCTTATACTTTTTATTTGAGTTGGAGGTCATCCTTCTCCGAAAATAGAAACACGATGCCAGCAAGTGATTGTTCAATCAGTTATCTATATCCATTTTTGGGTTGGATTATTTCAAGACCAACATAATCTTCGTGTAAAGCAGTATTCATAGATGTTTTTTCTCAATTAAAAAAATATATTCTTATTAATATATTAATATTTTTCTTACTGCACAGTGCTACCCTGGTGAAGATGATACTGCAATAGCACGTGGTGTCCTAATGTAAGATATAATTTCTTTCTATTTTTCTTTCCTTTCAAAGAGTGCATTGTTTTGACACTGGCAAAATTTCTAAAAGCCATGGAAGATGTTTGCATCTTGCAATGCAGAAACCGAATTTCATAGGGAGTTCTCTATTTCATGTTCTGTTTACAATGAGTAAACAATATACATATTTAGGAATGTGCTAGCAAATCATGCGTTAGGATATATTTCCTCAATATGCATCAATACAATATCCTGCTAAGTTATATACAAATCTCCTTTGGATACTTAAGCACATACAGGAGCACACTATAAAGTGCTCCATCCAAGGTAAAATATTAGAATTTGATCGAACTTCGGAAATAGTTACATAATATATTATTTTATTATGTTTATAGTACTATAGTATGTTAAAAGGAAGTGTCAAAATTCTTGCACTGGGGACCAGAAAAATCAAAGCTAACTTCAGAAAAATCAAAGTTAAAAAAGTGTTTCGTTATAGGATGAATAAATAAGAAATTTTTGGGGAAAAAGACGTGCTCAGATGCTTGTTTTTCTGATATACTGCATTTTTATTTAAGGTATCTATCACAAGGGAATCTTAGGGATGCAAATTTGCTCATGGACGAGCTGAAGGATCAACTAAAATCTGCTGACTTGGAAATCCCCAAAACAGATTTAATTCAGTTCATCAAGTATCTCTTACCGACGTAAGTCTTTCCTGTCTTTCAATTTGCATTATTTTTATGTTTCTTTTCCACATTTTTGTTCTGCAATGTTCTCATGTATTTGTGTGCATTCATGCTGCAATTTGCCATGATAACTTAGAGGACACCTGCAGAGTAGTTTCATCCTTACATGTTTCTACTAAAAAATACTGATCGCAGGAACAATTCTTTTTTTTTTTTTTTGAAAGAACCACCAGTTATGAGAAAATCTTTCATGGCCTAGGTACATTACCTGGGTATTAGACGATTTTCCACCTTTGAGATATGTTCATAGTTTATGTAGGATTTGTTTTCAGTAAAGATCATGAATGCATATAAAAATAATAAAATATTAAATATTTCTTTGATGGTTATTGAAAAATTCTGATAACCTTATATAACTTAGCCGTTTAAGTTCTCACTGATGGTTAAAGTTCAAACTGTTAGATTTGGTTGATGCTTTGCTATTAGATTGCATGCTATGCAGGATAATGATTATATTTGACTGTATTGATGATGTGATAATTTTAACACTGTAAATCTAGGATCTACTGTGTGCTTGTGTTGTGTATCACCGCGCAATATGTTGATCTAGGTTGCCTAGGTAGCTTTCTGTTCACTGTAAACAAACTGATCCTACAGTTTCAATTATCCAAGTTTCCATGCATCTTTCGAATAATTGATGAGATAGTTTTGCATTTTGTTACTTGTACGTGTATACCAAGCCCAGATGTTATTTTATACAAGCAACAAGTTTTTTGTTCTCATTGTTTCCTCTGGTCGTGGGTATATTACTGACTGCATGCTATGTTTACAGGCTCGAAAGAGATGCTTACCCTCTTTTCAGGACACTGCGGCAGAAGTACAAGACAAGTACAGATCGCGAGGCTGTATTTGAGGAGGTAGCTATTTCATCAAATATAGTGTTAGCTTGCTAAACAGCTGTAAAACATGCACCAAAACATCTTATTCTTTCAAAGATTAACTTAACAAGAACTGGGAAAAATTATATTTTTCATGTTCCCTGCATAGTTGTCATAAAACAATGTGTTCACAAGAGTTATATTAGATCATGTAGGAAACTCTACAATTTAATCCACCAACAACCTTGTTATCATGTGCTGTCCATAGGGAAATGTAAACAGTGTTGATAAAGGACCATCTGCACTTATAATGTGCTTAATATTTAACTCTACTAGCAGAGTAATATGTGGATAGAACTTCCATTACATTAACTAGCAGAGTAACTTGAAGGTAGTTAATGCTTAATATATGAAAAACAAACTGAAACAGAGCTCACGTGATATTATGGTTGGGTTGCAGTTATTAGATGAAATAGCCGCAAAATTTTATGGAATACGGAGCCAGAGCGCTTTGGAAGGACTTTTTGGTGATATGTTCAGGGTAAGATTTACCTCTTTCATCTATCATTCATTCATGCTGATTGCTAGTACATTGCATTGATTACTTTTGAAGTTGAGTACACACCAGTTGCTTTTTACAATAACTACCGTCGTATGCCTTTAGTTCCATATCAGTCATCCGAAATTACGTTTCATGAAGTGCATATCATGTTTAGAGGAAAGAATATATATTTCTATAATTTGAAATTGCAGTTGATCTAAGCATTCAGGAATTGAAGTGCACAATTTTATGTAGCTTATGAAGTCACGGATGTCCACCAACGTGGTAAACAAACAAGAAAAAAAATTGAGTTCTTTCTTTCAGTTATAAATATTGCCATCTTCATTTTGTTTTGTTCAATTCACCTTTTATGTACGTTCATGTAATTTCACGTATAGTTTCCCAAGTACAATGAAGCAAACAGATAATCAATACTAAACCATTAGTGTAGCCAATATTAGTACAATGACTAGAAGTCGGTAACCTAGTTCCGATACAAGCCATTATTGATCTTGTTCTTTGTATTCTGCAGGTATAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA002845

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA002845&oldid=40569"