BGIOSGA002852

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Revision as of 10:42, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA002852| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA002852, complete gene.| tag = P0701D0...")
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Gene Name

BGIOSGA002852

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA002852, complete gene.

LocusTag

P0701D05.24

Ensembl Transcript ID

BGIOSGA002852-TA

Ensembl Protein ID

BGIOSGA002852-PA

Length

1928

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:3854873..3856800

Sequence Coding Region

3854873..3855068,3855686..3855870,3855962..3856159,3856246..3856305,3856651..3856800

Genome Context

<gbrowseImage1> name=IndicaChromosome01:3854873..3856800 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:3854873..3856800 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGCATTCTGGTCGTCTGATGCACACAGCTTCAACTTTCAGTTGGATACTTTGGAGTTTTAACTTTCCAGCTTCTGTTTCTCTAATCTGCAATTCTGCAAGCAGGCAAATGTGTTCCATAAGGAGCTTTGCTTTTGTGCTGGTATTAGCATTTTCAGTTGCAGTCGCGGAGAGCAGAGATTCATTTAATGTATTGGCTCATAAAAGCTTTCCCCTTGAAAACAAGAAGACAGGGTTAACTTCAGCCAATGGAAAGCTGTGTCAACTATGCGAGCAGTACTCAACGGAAGCACTGTTCTACCTCCAACAAAATGAAACCCAAACTGAGATTCTTAGCATCCTCCACCATGCATGCGCAAACGTTGGACCTCTAAAACAGCAGTGCATCACTCTGGTTGACTACTACATTCCCCTTTTCTTCTTGGAGGTTTCGGTGGTAACACCTGAAAAGTTCTGTGAATCAGTGCATCTCTGCAGAAAGGGAACGATGCTTCGCCTACCATCTCGAGGAGATACATGCGGCATATGCCATCATGTTCTTGTTGAAGTTCTTATCATGCTAAAGGATCCTGACATGCAGCTGGAGATAGTCGAGATATTTCTCAAAGCATGCAGCAAGGCAGATAATTATGTACAGCAGTGCAAGAAGATGGTCCTTGAGTATACCCCTTTGATTCTGGTGAAATCTCAGAAGTTTCTTGAGACGACAGACGTCTGCTCTACAATTCATGCATGCAAAACGGGGACACAAGCATCTGCAGAAACCATGCTTCTATCTGCCGCATCGTGA</cdnaseq>

Protein Sequence

<aaseq>MHSGRLMHTASTFSWILWSFNFPASVSLICNSASRQMCSIRSFAFVLVLAFSVAVAESRDSFNVLAHKSFPLENKKTGLTSANGKLCQLCEQYSTEALFYLQQNETQTEILSILHHACANVGPLKQQCITLVDYYIPLFFLEVSVVTPEKFCESVHLCRKGTMLRLPSRGDTCGICHHVLVEVLIMLKDPDMQLEIVEIFLKACSKADNYVQQCKKMVLEYTPLILVKSQKFLETTDVCSTIHACKTGTQASAETMLLSAAS</aaseq>

Gene Sequence

<dnaseqindica>1..196#814..998#1090..1287#1374..1433#1779..1928#ATGCATTCTGGTCGTCTGATGCACACAGCTTCAACTTTCAGTTGGATACTTTGGAGTTTTAACTTTCCAGCTTCTGTTTCTCTAATCTGCAATTCTGCAAGCAGGCAAATGTGTTCCATAAGGAGCTTTGCTTTTGTGCTGGTATTAGCATTTTCAGTTGCAGTCGCGGAGAGCAGAGATTCATTTAATGTATTGGGTAAGTCATGAATTCATTATGAGAATGAATAATGTTACTAATATTTTCTCCATTCTTATTTTCATATCAATTGGTGTTTCTGATGATAATTCTAAGTAGATCAAGCGCCGCAATGGCAAGCAATATAACACTCTCTACAGTTCTAAAATATAAAGGAATACATTTATGTGTTGATCTACATTAATTATTCCACATCACGTTATATGCGTTGGTCTAAGATTGCACAAGCACATAATAGTAAAATTGGTATCTGTGTGTTTGCTGATGACGAATGTTATGAGAATTGCATTTCTGACCAGTCTTGCTTGACACATCTGCTGCATATCAGACATCATGAGTTACATTTATTTTATCTATTTTTGTTTTCATTTTGAAAACTCTTATCTTCACCTGTAATAAAATTGTAATTCAGATATCACACAGTGGTCAATATATCTTCAGCATAAGAATGATTCCGTTCTACAATTTTGTTTTCACTTGAAAACTCTATCTTCACCTGTAATAAAATTGTAGGTCAGATATCACACAGTGGTTATATCTTCAGCATAAGAATGATTTCGTTCTACAATTCAACTTATTAGTTTTTGACTCTACGGTCAATTTGTCATGTATTTCAGCTCATAAAAGCTTTCCCCTTGAAAACAAGAAGACAGGGTTAACTTCAGCCAATGGAAAGCTGTGTCAACTATGCGAGCAGTACTCAACGGAAGCACTGTTCTACCTCCAACAAAATGAAACCCAAACTGAGATTCTTAGCATCCTCCACCATGCATGCGCAAACGTTGGACCTCTAAAACAGCAGGTCTGAATAAATTTCAATGCCCGCCTTGGAATCAGAACATGCTAATTTCGTCAGACTAATTTTTGTATGCCAATGGTTTACCCTGTTACAGTGCATCACTCTGGTTGACTACTACATTCCCCTTTTCTTCTTGGAGGTTTCGGTGGTAACACCTGAAAAGTTCTGTGAATCAGTGCATCTCTGCAGAAAGGGAACGATGCTTCGCCTACCATCTCGAGGAGATACATGCGGCATATGCCATCATGTTCTTGTTGAAGTTCTTATCATGCTAAAGGATCCTGACATGCAGGTAACTGCCATCATTTCAGATTTTCAATGGTCACAACCAATTCTGTATTGCTGGGGTCGTACTTAATCGAATTCGTAATTTTGCAGCTGGAGATAGTCGAGATATTTCTCAAAGCATGCAGCAAGGCAGATAATTATGTACAGCAGGTAAATTAGTCACATTTATGGAAATACAAAATAAATCAGCCTGTACTAAAGAATCAAACACATTTTTCATGGTTGTTTATACAGAAAATCACTTAACATCCTGTAAGCAAAGCATTTCAAATGCTATAATGCTTTTCTCGAATGTGCTTGCATATACCGATTTGAGACATTAAGATGTCGCTGATCAAGCCCAGCACCTAGAAATTTATCTGTAATTAGCTTAGTTACCTGCAACTTTGTATCAGCTGAATGGTTTTCCTGATGAAATACTGCCATTTTAACCATTTGCAAGGCCCATTTCTAGTTCTGTTCTTCTCATGGCAGTCCTGTTTGTAATTTTTGCAGTGCAAGAAGATGGTCCTTGAGTATACCCCTTTGATTCTGGTGAAATCTCAGAAGTTTCTTGAGACGACAGACGTCTGCTCTACAATTCATGCATGCAAAACGGGGACACAAGCATCTGCAGAAACCATGCTTCTATCTGCCGCATCGTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA002852