BGIOSGA002857

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Revision as of 10:42, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA002857| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA002857, complete gene.| tag = OS01G01...")
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Gene Name

BGIOSGA002857

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA002857, complete gene.

LocusTag

OS01G0168600

Ensembl Transcript ID

BGIOSGA002857-TA

Ensembl Protein ID

BGIOSGA002857-PA

Length

3348

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:3947990..3951337

Sequence Coding Region

3947990..3948230,3949128..3949195,3949282..3949370,3949607..3949769,3949846..3950135
,3950231..3950435,3950518..3950675,3951091..3951337

Genome Context

<gbrowseImage1> name=IndicaChromosome01:3947990..3951337 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:3947990..3951337 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGTGGTGGCGGCGGGGCACGGCGGGCGGCGGAGGCGGGCGTGGAGGTGGGCGATGAGGGCGGCGGCGAGCGCCGTGGTGTGGACGGCGGTGGTGCAGCTGGCGTCGATCGCCGGGCTGTGGAGGCCGCGGGTGCTCGCCGACTGCGGCGGCGGGGGCGGCGCCGCCACGGGGCTCGCCGCGCTCGCCGGCGAGGACCGCGTCGCGGCGAGGCTGTCGCCGCCGGCGCTCGTGCCCAGGAGAATTTATAAGAGCAATGGCTATTTACTGGTGACTTGCAATGGAGGACTCAATCAAATGCGAGCTGGGATATGTGATATGGTGACCATAGCTCGCTATTTGAATCTAACATTAGTGGTGCCTGAACTGGATAAGAGGTCTTTTTGGGCTGACTCAAGTGAATTTGGAGATATCTTTGACGTCAGTCACTTCATTAATTCGTTAAGAGATGAGCTGATGATTGTTAAGGAACTTCCTATGAAACTCAAGTTAAAAACTAAGAGAAGACTTTACTCAATGCCACCTGTGAGCTGGTCCAACGAGACATACTATCTAAAGCGGGTATTACGTCTTGCAAGGAAGCACAAAGTGATCCATTTCAATAAAACAGATGCCCGCCTTGCAAACAACGGTCTTCCTGTCAAGCTCCAAAGGCTGCGTTGCCGTGTCAACTTTGAGGCTTTGAGATTCACCCCACAGATTGAGGCCCTTGGACGAAAACTTATCTCCACCCTTCAAAAAAGTGGGCAATTTGTTGTTCTACACTTACGATATGAAATGGATATGCTTTCCTTTTCGGGCTGCACACACGGTTGTTCTGATGAAGAAACCGAAGAGCTCACTAGAATGAGATATGCATATCCATGGTGGAAAGAAAAGGAGATAGACTCTGAGGTTAAGAGGTTTCAGGGACTTTGTCCCCTTACACCCGAGGAAATTACTCTGGTGCTTAAAGCTCTAGGATTTAAAAAGGATACACTGATTTATATAGCCTCTGGTGAAATCTATGGAGGTGAAAGGCGGTTGGCAGCTTTGAAGGCTGCATATCCTAGATTGGTACGGAAGGAGAAACTTTTATCTCCTGAGGAATTGCAGCCATTCCAGAACCACTCAACCCAGATGGCAGCACTGGACTACATGGTTTCAATAGCAAGCGATGTTTTCATCCCCAGTTATGATGGAAATATGGCAAGGGTTGTTGAAGGCCATCGCAGATACACGGGCTTCCGCAAGACCATCCTATTGGACAGGGTGAAACTTGTTGAACTTTTGGATAGTTTCCAAGGAGGTGCAATGTCCTGGAATGAATTCTCTGCTGCTGTGAAGAAGGCACACCAGCATCGCATGGGTCAGCCGACAGAAAGAAAGGTCATCCCTGGCCGGCCCAAGGAAGAGGACTATTTCTATGCTAATCCCCAAGAATGCCTTGGTTCAAGGGAGGGATTAAGAGATATTTTGTGA</cdnaseq>

Protein Sequence

<aaseq>MVVAAGHGGRRRRAWRWAMRAAASAVVWTAVVQLASIAGLWRPRVLADCGGGGGAATGLAALAGEDRVAARLSPPALVPRRIYKSNGYLLVTCNGGLNQMRAGICDMVTIARYLNLTLVVPELDKRSFWADSSEFGDIFDVSHFINSLRDELMIVKELPMKLKLKTKRRLYSMPPVSWSNETYYLKRVLRLARKHKVIHFNKTDARLANNGLPVKLQRLRCRVNFEALRFTPQIEALGRKLISTLQKSGQFVVLHLRYEMDMLSFSGCTHGCSDEETEELTRMRYAYPWWKEKEIDSEVKRFQGLCPLTPEEITLVLKALGFKKDTLIYIASGEIYGGERRLAALKAAYPRLVRKEKLLSPEELQPFQNHSTQMAALDYMVSIASDVFIPSYDGNMARVVEGHRRYTGFRKTILLDRVKLVELLDSFQGGAMSWNEFSAAVKKAHQHRMGQPTERKVIPGRPKEEDYFYANPQECLGSREGLRDIL</aaseq>

Gene Sequence

<dnaseqindica>1..241#1139..1206#1293..1381#1618..1780#1857..2146#2242..2446#2529..2686#3102..3348#ATGGTGGTGGCGGCGGGGCACGGCGGGCGGCGGAGGCGGGCGTGGAGGTGGGCGATGAGGGCGGCGGCGAGCGCCGTGGTGTGGACGGCGGTGGTGCAGCTGGCGTCGATCGCCGGGCTGTGGAGGCCGCGGGTGCTCGCCGACTGCGGCGGCGGGGGCGGCGCCGCCACGGGGCTCGCCGCGCTCGCCGGCGAGGACCGCGTCGCGGCGAGGCTGTCGCCGCCGGCGCTCGTGCCCAGGAGTGAGTGCCCCTCCTCCTCCTCTTCGTGCTCCTCTCTGCTTCTCCTCCCCTCGCGCTCCTAGCAAGTAGGAGTAGTACTCGAGCTTGCGCGATCTGTGTGGGAGAGGGGAGGTCGTGGCTTCTCTGATTCGGGCGGTTGGGGCGAGTCAAATGCGGTTGCTTGGTGGTCAAAGGAGGCGCGTTTCGTGCTGGTTCGGTTCGATCTCGGGCTCGAATTGGCGGTTTTGACCAGGTTTTGTGCCATTTTGGGGATCTCGGGGGGTTGAATTGGGCGAGAACTTTCTAAATTTGCGATGATTTGTTGGGATATATCATGGATTATTTAGCGGAGGTCATCCTTTGGTAGCTCGAATGAGATTCTTCTCAGAACCTCGACCCAAATGTGGGTTCATATCTTCAACCTCTGTTGCTCGTATGCTATAATTAGTAGTTGTTTATTTAATTTAATTTACTTATAGAAAACTCCCATATAGCCCAGCGCTTTGGGCATGAAATGGGCTCTGGAATAGGTGATGTGAATTGGTAAATGAACTTATTTGCTTTGAAGTTAAACGGGATTATTATATATTTATTATTAGACGTGTGTGTTCCATGAGAAATGGGAATCATATAGTAATATAGCGCAGTAGGAGCCTCTCCTACTGTTTTCTGTCAAATAAAAAGAAAAGAAGTGGGAATCATAAATTCATGATGTAAGCTTTTCAACAACGATGTGTCAAACAAGCTCCGATTGATGCAAACTTCTACTCCTTTATTATTGCCAAATTGATTTTTTTGCTTGTAGCTTGCTAGCAGCTTCATTGTAGAAACACATAACTAGAAGACAATTCACATATCTTGTTGTCTCAGTCCTTTTGTTGGTACTAGAGCTGATTGGCATCTTGTTGCTTTTTGCAGGAATTTATAAGAGCAATGGCTATTTACTGGTGACTTGCAATGGAGGACTCAATCAAATGCGAGCTGGGGTTTGTACCTTAGCTATTGTAGCTTGAGCTAGCTCATCCACTCATTTTAAATTCGAATATAAATTTCTTATAATGTTGTTTTACAGATATGTGATATGGTGACCATAGCTCGCTATTTGAATCTAACATTAGTGGTGCCTGAACTGGATAAGAGGTCTTTTTGGGCTGACTCAAGGTATAATTTCCCACATAACCTTCATTTCTGTAATATCAACAGCATGTCTGTTTGATGAACAATTTTATCCTAGTTTGCTGTTGTGAACATGAGTTATCATCCCTTGCTATTGTAAACAGCATTCATCTCCATATTTGAGAATGAACTATGATTTTTGCAAGTGAAAATGTAGCCGAACCACAGTAATTTCTGTTGTTGTGTTTCTATTTCAAAAGTATCTTTTAATTTTTTTTCAGTGAATTTGGAGATATCTTTGACGTCAGTCACTTCATTAATTCGTTAAGAGATGAGCTGATGATTGTTAAGGAACTTCCTATGAAACTCAAGTTAAAAACTAAGAGAAGACTTTACTCAATGCCACCTGTGAGCTGGTCCAACGAGACATACTATCTAAAGCGGGTAATAAAAGTTTGTTTGTTCTGGCTGTGTTTAACAGCACTTAAAAAAACTGTCATCTGACAGATTCCCTATGCAGGTATTACGTCTTGCAAGGAAGCACAAAGTGATCCATTTCAATAAAACAGATGCCCGCCTTGCAAACAACGGTCTTCCTGTCAAGCTCCAAAGGCTGCGTTGCCGTGTCAACTTTGAGGCTTTGAGATTCACCCCACAGATTGAGGCCCTTGGACGAAAACTTATCTCCACCCTTCAAAAAAGTGGGCAATTTGTTGTTCTACACTTACGATATGAAATGGATATGCTTTCCTTTTCGGGCTGCACACACGGTTGTTCTGATGAAGAAACCGAAGAGCTCACTAGAATGAGGTTTGTCTGTAATGATTTGCATTACTAGTTAACGCTGACTTGCTGTACTGATTTGCTACTTTAATAGATATGAACGAATCGTCTTTGAACTGTAGATATGCATATCCATGGTGGAAAGAAAAGGAGATAGACTCTGAGGTTAAGAGGTTTCAGGGACTTTGTCCCCTTACACCCGAGGAAATTACTCTGGTGCTTAAAGCTCTAGGATTTAAAAAGGATACACTGATTTATATAGCCTCTGGTGAAATCTATGGAGGTGAAAGGCGGTTGGCAGCTTTGAAGGCTGCATATCCTAGATTGGTGAGCAGGTTCTCCCATTTAAGGTGTCCCCTTTAGATTTATCATGGATGCTTGATAGTAGCTCACTTTGATCTTATGTTAGGTACGGAAGGAGAAACTTTTATCTCCTGAGGAATTGCAGCCATTCCAGAACCACTCAACCCAGATGGCAGCACTGGACTACATGGTTTCAATAGCAAGCGATGTTTTCATCCCCAGTTATGATGGAAATATGGCAAGGGTTGTTGAAGGCCATCGCAGGTTTGCTTCTCCGGAATCTAATCCAACTAGAGTTCACTCATGGTTTGTTTTTGACATTAGTAAAGAACTGCTTGGGCTCCTGTGCATTCTGAATTCTTACAAATAACTACAAAAAAGAAAAAAAATCAGTGACTTTAAAACTACTTAGGTCCCCATCGGTTGGTCTAGTCATATTATAAGCCATAACGGCTTATTAGCGATTAAAAAATGATATGTGAGTAAAACTTTTGTATATATGTTCTTAGTGATTGAAAAGCCAAAGTTGAAAAAAAAACTATGTTGAAAAAGAATCAAATTCAAATTCAAGTTTTAAAATTCAAATTTTGGCTTTGGCTTATAAGCCATAGGGCAAACGATGAGGCCCTTAACTCAATGTTCTGTATGCTGAGGAGCCCTTTTTGTTCATCCATTTTAGATACACGGGCTTCCGCAAGACCATCCTATTGGACAGGGTGAAACTTGTTGAACTTTTGGATAGTTTCCAAGGAGGTGCAATGTCCTGGAATGAATTCTCTGCTGCTGTGAAGAAGGCACACCAGCATCGCATGGGTCAGCCGACAGAAAGAAAGGTCATCCCTGGCCGGCCCAAGGAAGAGGACTATTTCTATGCTAATCCCCAAGAATGCCTTGGTTCAAGGGAGGGATTAAGAGATATTTTGTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA002857

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA002857&oldid=40581"