BGIOSGA002892

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Revision as of 10:43, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA002892| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA002892, complete gene.| tag = OsI_006...")
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Gene Name

BGIOSGA002892

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA002892, complete gene.

LocusTag

OsI_00654

Ensembl Transcript ID

BGIOSGA002892-TA

Ensembl Protein ID

BGIOSGA002892-PA

Length

4708

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:4720325..4725032

Sequence Coding Region

4720325..4721494,4722367..4722576,4722872..4723093,4723667..4723861,4723935..4724081
,4724161..4724310,4724600..4724730,4724816..4725032

Genome Context

<gbrowseImage1> name=IndicaChromosome01:4720325..4725032 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:4720325..4725032 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGAGCGTGGTGGGCTTTGATCTAGGGAATGAGAGCTGCATTGTGGCCGTCGCGCGGCAGCGCGGCATTGATGTGGTCCTCAACGAGGAGTCGAAGCGGGAGACTCCGGCTATTGTCTGCTTCGGCGACAAGCAGCGGTTCATCGGGACAGCGGGCGCTGCTTCCTCCACGATGAACCCGAAGAATTCTGTTTCTCAGATCAAGCGGCTCCTCGGGCGCAAGTACTCTGATCCTGAGCTCCAGCGTGATATTGCGGCCTTCCCCTTCCGTGTCTCGGAAGGGCCTGATGGATTTCCTCTTGTTCATGCCCGTTACCTTGGTGAAGAGCGGGTTTTCACTCCGACGCAGCTCATGGCTATGGTGCTTTCTAATCTGAAGGGTATTGCAGAGAGCAACCTGAATACTGCTGTTGTTGACTGCTGCATAGGCATTCCGGTGTACTTCACAGACCTTCAGCGCAGAGCTGTGCTTGATGCCGCCACCATTGCCGGCCTCTGCCCATTGCGGTTGTTTCATGAGACCACCGCAACAGCATTGGCATATGGTATTTACAAGACTGATCTTCCAGAGAATGATCAATTAAATGTTGCCTTTGTGGATGTTGGACATGCCAGCATGCAAGTCTGCATTGCTGGTTACAAGAAGGGACAACTCAAGATCTTGTCGCATGCATATGACCGGTCCCTTGGTGGGAGGGACTTCGATGAAGTCCTGTTTAAGCACTTTGCAGCGAAATTCAAGGATGAGTACAAGATAGATGTTTACCAGAATGCTCGTGCCTGCATTAGGCTCCGTGTGGCTTGTGAGAAGCTCAAGAAGGTGCTGAGTGCTAACCCTGAGTCACCAATGCACATTGAATGCTTGATGGATGAGAAGGATGTGAGAGGTTTTATCAAGAGGGAAGAGTTTGAGAAGATTAGTGCGCCAATACTGGAACGTGTTAAGGGGCCACTGGAGAAGGCTTTAGCAGAAGCTGGTTTAACGACAGAGAATGTCCATTTTGTTGAAGTTGTTGGTTCAGGTTCTCGTGTCCCGGCAATAATTAAGATACTCACAGATTTCTTTGGGAAAGAACCAAGGAGGACAATGAATGCGAGTGAATGTGTTGCCAGGGGATGTGCGCTGGAGTGTGCTATCCTTAGTCCCACTTTTAAAGTGCGAGAGTTTCAGGTTAATGATGGTTTCCCTTTCTCAATTGCAATGTCATGGAAACCAGACTCTCAAAATGGTGATAACCAACAGACTGTTGTATTCCCCAAGGGTAACCCATTGCCCAGCGTTAAAGCATTGACCTTCTATAGGTCCAATACATTTCAAGTAGATGTCACGTATGTTGATACTGGTGATTTGCAAATATCACCAAAGATCAGCACTTACACGATGTTGGAGGAGGAGGAAGTGGAAGTTCCAGTAGCAGCTACAACTGAGCCTCCGAAAGATTCTGCCAAGATGGAGACAGATGATGCACCTAATGAAGCTGCTTCTGGAACTGATGTAAACATGCAGGAAGCCAAAGCCCCTGCAGATGCTGCTGCCGATGGTGCTGAAAATGGCGCACCAAATTCTGAGGAAAAATCAGTCCCTATGGAAACTGATGCCAAGGTTGAGCCATCAAAGAAGAAAGTAAAGAAAACTAATGTTCCAGTTGCTGAGTTGGTTTATGGTGCCTTGGGGACTACAGAGTTGCAGAAGGCTGTGGAAAAAGAGTATGAAATGGCTCTTCAGGACAGGGTGATGGAAGAGACAAAAGATAAGAAGAATGCCGTGGAGTCTTATGTTTATGACATGCGAAACAAGCTGTATGACAAGTACAATGATTTTGTGACTGCTGAAGACAAGGAAGCATTCATTGCTAAGCTTCAAGAGGTTGAGGATTGGTTGTACGAAGATGGTGAGGATGAGACCAAAGGAGTGTATGTTGCTAAGCTTGAAGAACTTAAAAAGGTGGGGGGTCCCATTGAGCCAAGGTACAAGGAATGGATGGACAGAGGCCCTTCCATCGACCAACTTGCTTACTGTATCAACAGTTTCAGAGATGCTGCCTTGTCCAAAGATCCGAAGTTTGATCACATTGAGATGGAGGAGAAACAGAAGGTGATTAACCAGTGTTCCGAAGCAGAAGTCTGGCTGAGAGAGAAAATACAGCAGCAAGATGCTCTGCCGAAGCATGCTAACCCTGTCCTACTCTCTTCTGATTTAAAGAAAAAGGCCGAAACGGTTGACAGGTTCTGCAAACCGATAATGATGAAGCCGAAACCAGCTCCTAAGCCACAGACGCCCCCACAAACGCCACCGACCGAGACCCCGGCTGGCGGAGCCCAAACACCAGAGCAGCAACCTCAGGGAGCTGAAGCGGCTGGCGAGGCCAGCGAGGGCGGCGCCAGCGAATCTACCGGCGAGCAAATGGAGACGGACAAACCGGAGGGAACTGAAGCTGCCTAG</cdnaseq>

Protein Sequence

<aaseq>MSVVGFDLGNESCIVAVARQRGIDVVLNEESKRETPAIVCFGDKQRFIGTAGAASSTMNPKNSVSQIKRLLGRKYSDPELQRDIAAFPFRVSEGPDGFPLVHARYLGEERVFTPTQLMAMVLSNLKGIAESNLNTAVVDCCIGIPVYFTDLQRRAVLDAATIAGLCPLRLFHETTATALAYGIYKTDLPENDQLNVAFVDVGHASMQVCIAGYKKGQLKILSHAYDRSLGGRDFDEVLFKHFAAKFKDEYKIDVYQNARACIRLRVACEKLKKVLSANPESPMHIECLMDEKDVRGFIKREEFEKISAPILERVKGPLEKALAEAGLTTENVHFVEVVGSGSRVPAIIKILTDFFGKEPRRTMNASECVARGCALECAILSPTFKVREFQVNDGFPFSIAMSWKPDSQNGDNQQTVVFPKGNPLPSVKALTFYRSNTFQVDVTYVDTGDLQISPKISTYTMLEEEEVEVPVAATTEPPKDSAKMETDDAPNEAASGTDVNMQEAKAPADAAADGAENGAPNSEEKSVPMETDAKVEPSKKKVKKTNVPVAELVYGALGTTELQKAVEKEYEMALQDRVMEETKDKKNAVESYVYDMRNKLYDKYNDFVTAEDKEAFIAKLQEVEDWLYEDGEDETKGVYVAKLEELKKVGGPIEPRYKEWMDRGPSIDQLAYCINSFRDAALSKDPKFDHIEMEEKQKVINQCSEAEVWLREKIQQQDALPKHANPVLLSSDLKKKAETVDRFCKPIMMKPKPAPKPQTPPQTPPTETPAGGAQTPEQQPQGAEAAGEASEGGASESTGEQMETDKPEGTEAA</aaseq>

Gene Sequence

<dnaseqindica>1..1170#2043..2252#2548..2769#3343..3537#3611..3757#3837..3986#4276..4406#4492..4708#ATGAGCGTGGTGGGCTTTGATCTAGGGAATGAGAGCTGCATTGTGGCCGTCGCGCGGCAGCGCGGCATTGATGTGGTCCTCAACGAGGAGTCGAAGCGGGAGACTCCGGCTATTGTCTGCTTCGGCGACAAGCAGCGGTTCATCGGGACAGCGGGCGCTGCTTCCTCCACGATGAACCCGAAGAATTCTGTTTCTCAGATCAAGCGGCTCCTCGGGCGCAAGTACTCTGATCCTGAGCTCCAGCGTGATATTGCGGCCTTCCCCTTCCGTGTCTCGGAAGGGCCTGATGGATTTCCTCTTGTTCATGCCCGTTACCTTGGTGAAGAGCGGGTTTTCACTCCGACGCAGCTCATGGCTATGGTGCTTTCTAATCTGAAGGGTATTGCAGAGAGCAACCTGAATACTGCTGTTGTTGACTGCTGCATAGGCATTCCGGTGTACTTCACAGACCTTCAGCGCAGAGCTGTGCTTGATGCCGCCACCATTGCCGGCCTCTGCCCATTGCGGTTGTTTCATGAGACCACCGCAACAGCATTGGCATATGGTATTTACAAGACTGATCTTCCAGAGAATGATCAATTAAATGTTGCCTTTGTGGATGTTGGACATGCCAGCATGCAAGTCTGCATTGCTGGTTACAAGAAGGGACAACTCAAGATCTTGTCGCATGCATATGACCGGTCCCTTGGTGGGAGGGACTTCGATGAAGTCCTGTTTAAGCACTTTGCAGCGAAATTCAAGGATGAGTACAAGATAGATGTTTACCAGAATGCTCGTGCCTGCATTAGGCTCCGTGTGGCTTGTGAGAAGCTCAAGAAGGTGCTGAGTGCTAACCCTGAGTCACCAATGCACATTGAATGCTTGATGGATGAGAAGGATGTGAGAGGTTTTATCAAGAGGGAAGAGTTTGAGAAGATTAGTGCGCCAATACTGGAACGTGTTAAGGGGCCACTGGAGAAGGCTTTAGCAGAAGCTGGTTTAACGACAGAGAATGTCCATTTTGTTGAAGTTGTTGGTTCAGGTTCTCGTGTCCCGGCAATAATTAAGATACTCACAGATTTCTTTGGGAAAGAACCAAGGAGGACAATGAATGCGAGTGAATGTGTTGCCAGGGGATGTGCGCTGGAGTGTGCTATCCTTAGTCCCACTTTTAAAGTGCGAGAGTTTCAGGTATGTGCCCGCTTTCACCCTGCTGCCTTCTCTGCTTTGGCTATCTGCACAATACATTAATAGAAATCTTGCTGCTTCATGCCTTAAAATCTCTAATTAAGGATTGTTTAAGACGCTCATCCTCATGTGCACCGTCATTAAAGTTTAATTGGATAGTCCAATAAGATTTGTCTCCTTACATGACTCCATTAAGATCATGCAACCATCACCAATAGTTATTCATAGTGTCGTAATTTTCATGACAATTTTATCCGGTACTCCAATGAAACTGTTTCCTTAATATCATGCAACCTCTAGTTATAACCAATAGGTTTATGCAGAATGTTCGTCATAATTTTCATAACAACTTAGCGTGATACTTAACATGACTCAAATATCATGCAACCTCTAGTCATGAGTTTTGTGACCAATATGGCTTATTATGCAGAATGTTGGTCATAATTTTCGTTGTAATTTAATCTCATACTCCAATAAGATTGTTTCTAACATGACTTCATTAAGATCGTGCGAACTCGCTTATGCAGAGTTTGTCTTGTTGGCTCCTTGAATCTGGGTTTACCCACCAATTTAATTCTTGACTAATAACATTGCTGGAATCTATAAAGCTTTCAGCATATTCTTACTGTTTAAGGATAACATATGCACTGAAGGCCTGATTTGAATGAGTAGTATTTGGTTCAAAAATCTATTTCACTCCCTTGAAGTCTTAAAATTAAAACAAATCTTAGTATACTACTACTCAAAATCATTTTAGGATAACACTAACACTAGGATTTTTTTCTTTCGTGAGTTTACAATAAATCATCCTAGTTCTTGCTTGTACAACACTAAAGTATGTTTTTTCCCCAGCTATAACGCTAAACCCTGTGCAGGTTAATGATGGTTTCCCTTTCTCAATTGCAATGTCATGGAAACCAGACTCTCAAAATGGTGATAACCAACAGACTGTTGTATTCCCCAAGGGTAACCCATTGCCCAGCGTTAAAGCATTGACCTTCTATAGGTCCAATACATTTCAAGTAGATGTCACGTATGTTGATACTGGTGATTTGCAAATATCACCAAAGATCAGCACTTACACGGTAACTGACTTAATATTTCCTTTTTTATGTTCTCGAATGTGCTTCGAGTCCAACTATCGTGTATGGATCAGTTCTTTTGTTGTGTGTGTTAAGGTAAATGTATAGGTTGGTCCTTTCAATCCCGGCAAAGGTGACAAGCGAAACTGAAAGTGAAAGTCCGCCTTAACATCCATGGGGTGGTCACAGTTGAATCAGCAACAGTGAGTGATAATGCAGGCTTTTTTTTTTTGTAGTTCTTTTCCTAAATGATTTTCGTTGAAATAAATCTGAGAGTATTTCTATTGGTCTGGTGCAGATGTTGGAGGAGGAGGAAGTGGAAGTTCCAGTAGCAGCTACAACTGAGCCTCCGAAAGATTCTGCCAAGATGGAGACAGATGATGCACCTAATGAAGCTGCTTCTGGAACTGATGTAAACATGCAGGAAGCCAAAGCCCCTGCAGATGCTGCTGCCGATGGTGCTGAAAATGGCGCACCAAATTCTGAGGAAAAATCAGTCCCTATGGAAACTGATGCCAAGGTAAATTTTCATTACTGACAAAATCTTGAATTATCATGCTAGCAGGTGCCTGAAGCCTTTTAATTTGAAACCTTTTGCTTTTTGAAGTATCATCAGTACAAGGTGGAAGTTGAGGAAACAGTATTCTGGACATGTTTTTTATTCAGAGCTAACATATCTTGCCTTTGTGGTTTATATTTATAGATAACCTTTTGAAGCTTACATGCGCAAGCTGATCTGATTAGTCCACTGCACTGTTATGCCTTCGATTTGACACTTTGCTTGCATTGATTTTATCACGACTTTTTCCATGCCAACCACAATGTGCCAGTGCGCAACAAATTCGTTGTAATTGCTGTTTTTGTGGTAGTTATCTATCATTCTATTGCTGAAACTATACTTGATACAAATATGATCATTCTTTACTGGATCCTTCCTACTGTGGTTCAAAATTTGGTTTTATCTTTTCCTCAATTCCTCAGTCTGTTTCAGTTTGCCCTAAAGGGACAAGTGAATTGATGAAATGCGATGAAGGAAAAAGTAAACTGTATCAGATGAACTAACAGTTGGCACATTTTGATGAAAAAACTGCAGGTTGAGCCATCAAAGAAGAAAGTAAAGAAAACTAATGTTCCAGTTGCTGAGTTGGTTTATGGTGCCTTGGGGACTACAGAGTTGCAGAAGGCTGTGGAAAAAGAGTATGAAATGGCTCTTCAGGACAGGGTGATGGAAGAGACAAAAGATAAGAAGAATGCCGTGGAGTCTTATGTTTATGACATGCGAAACAAGGTTTGATCGATTCCACTCTTTCCTGACTTCATCTTTAGTTAGAGGCAGAAACTGATAATATGTTATTTTTCAGCTGTATGACAAGTACAATGATTTTGTGACTGCTGAAGACAAGGAAGCATTCATTGCTAAGCTTCAAGAGGTTGAGGATTGGTTGTACGAAGATGGTGAGGATGAGACCAAAGGAGTGTATGTTGCTAAGCTTGAAGAACTTAAAAAGGTTTGTCTCTTTCATTTATTTTGCTCCTTACATCTTGTTAGTTTGTATATTAAAAAAAAGCTATGATTTTTGGTCACAGGTGGGGGGTCCCATTGAGCCAAGGTACAAGGAATGGATGGACAGAGGCCCTTCCATCGACCAACTTGCTTACTGTATCAACAGTTTCAGAGATGCTGCCTTGTCCAAAGATCCGAAGTTTGATCACATTGAGATGGAGGAGAAACAGAAGGTATTCAATGCATCAACTACAAAATTAGCACAATATCTTTTCTCTATACACTGATTGCAATGCTAGTTCACGAACTACGTTCTGCTAGTGAATGGTAACAGAAATAAAATCCTTTTATTAGGGTTACCAAATAATTGACATACGCCCTGCTTGGCCCTACATTGGATTATAGCAATTTTGAATGAATTGTAAAGCTTGATTTTTCAGAATAATTTTAGATAGACTTTTCACTTGTCTTAGTTGATCCCACCGATAGACGGTATTAAATTCATTTGCTTGTCACATGCAGGTGATTAACCAGTGTTCCGAAGCAGAAGTCTGGCTGAGAGAGAAAATACAGCAGCAAGATGCTCTGCCGAAGCATGCTAACCCTGTCCTACTCTCTTCTGATTTAAAGAAAAAGGCCGAAACGGTTGACAGGTCCGTAGATAAATCTCTCTTGACGCCACTTGCTGTTCCTGTATCCTATGTTTAAGCATACTTCTAACGCCCATTCTTTTCACAGGTTCTGCAAACCGATAATGATGAAGCCGAAACCAGCTCCTAAGCCACAGACGCCCCCACAAACGCCACCGACCGAGACCCCGGCTGGCGGAGCCCAAACACCAGAGCAGCAACCTCAGGGAGCTGAAGCGGCTGGCGAGGCCAGCGAGGGCGGCGCCAGCGAATCTACCGGCGAGCAAATGGAGACGGACAAACCGGAGGGAACTGAAGCTGCCTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA002892