BGIOSGA002955

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Revision as of 10:44, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA002955| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA002955, complete gene.| tag = OS01G02...")
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Gene Name

BGIOSGA002955

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA002955, complete gene.

LocusTag

OS01G0201000

Ensembl Transcript ID

BGIOSGA002955-TA

Ensembl Protein ID

BGIOSGA002955-PA

Length

5320

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:5892415..5897734

Sequence Coding Region

5892415..5892567,5893484..5893768,5893941..5894258,5894720..5894947,5895709..5895809
,5896318..5896429,5896722..5897165,5897474..5897734

Genome Context

<gbrowseImage1> name=IndicaChromosome01:5892415..5897734 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:5892415..5897734 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGGCGTGCAGGGTGAGGAGCCCCGTGCCGAGGGCGGTGGAGGGGGAGCAGGTGGCGGCGGGGTGGCCGCCGTGGCTCGTCTCCGTCGCCGCGGAGGCCGTGCGCGGGTGGGTGCCTCGCCGCGCCGAGTCGTTCGAGAAGCTCGACAAGATTGGTCAGGGAACATACAGTAATGTTTACAGAGCTCGCGATCTTGAAAAGGAGAAGATTGTTGCCCTAAAGAAAGTGCGGTTTGATAATTTGGAACCTGAGAGTGTGAAGTTCATGGCCAGGGAAATCCTTATTTTGCGACGGCTTGATCATCCAAATATTATTAAGCTGGAGGGTCTAGTTACTTCAAGAATGTCTTGTAGCTTATATCTTGTTTTTGAGTACATGGAACATGACCTAGCTGGACTAGCTTCTTTTCCTGGAGTGAAATTTACTGAGTCTCAGGTTAAATGTTACATGCAGCAGCTACTCTGTGGCCTTGAGCATTGTCATAGTCGTCACATTCTGCACCGTGACATTAAGGGTTCCAATCTTTTGATTGACAACCGAGGCATTTTGAAGATAGCTGATTTTGGCCTAGCAAGTTTCTTTGATCCTGAACAACGTCACCCTTTGACTAGTCGTGTGGTCACACTTTGGTATAGACCACCAGAACTTTTGCTTGGTGCCACAAATTATGGTGTTGCTGTAGATCTTTGGAGTTCTGGCTGCATTCTTGCTGAGTTATATGCTGGCAAGCCTATCATGCCTGGTAGAACTGAGGTTGAGCAGTTACATAAAATATTTAAACTCTGTGGTTCACCATCAGAGGACTATTGGAGGAAGTCTAAACTTCCTCATGCCACAATTTTTAAGCCACAGCATCCATATGCTAGGCGTGTATCAGAAACATTTAAAGATTTTCCTCCGCCTGCTGTGGCGTTAGTGGATGTTCTTCTTTCAGTTGATCCAGCAGATCGAGGAACAGCATCTTCTGCATTGCAAAGCGAGTTTTTTGCAACAAAACCATATGCTTGCAATCCTTCAAGTCTGCCGAGATATCCCCCAAGCAAAGAGTTTGATGCAAAACGGCGAGAGGAGGAAGCTCGGAGGCAAGGTATTGCTGGAGGAAAGCAACACAAGTATGATCCTGAAAGATGGACTAGAGAGTCGAGAGCAGTTCCTGCACCTGACGCAAATGCAGAATTAGTGTCATCTTTGCAGAAAAGACAAAACCAAGTCAATGCCAAGAGCAGGAGTGAGATGTTCAATCCCAGCAAGGAAGACTCTGCATCTGGCTTTCCGATTGAGCCACCCAGGCCAACTCATCCTGCTGAATCGTCTCAAGACTCTCAACGTGTCTACACAAGAACATTCCATTCTGGGCCTCTAGTTAATCAAAATAAACCTTCAAAGGCTGGACGGAGTGAAAATGGCGATATTCATCTTTCTGGTGTTGCAAACGCATCGGACTTCCGTGTGGTTGTATCAACAAGATCAAATATTAGTTCAGATAATGGCAATGGAACAGTGGTTACTCAAGCCGAAGCCTTTCCGCATGAACGGAGGCTGTCTGAATCTATAAACGAGCGTTTCAGTAGTAGTGGAAAGTATGATCAAGTATTTCAGCAGAAAGATGACAGGAGTAGCAGGGTGGATGGAGCTATTGGCTATGGATCAAAGGGTAACAAGATCCACCATTCTGGGCCTCTAATTTGCCCTTCAGGCAATGTCGATCAGATGCTGAAGGAAAATGACCGCCAAATTCAAGAAGTCTTCCGCCGAACCCGGGTTGAGAAGTCAAGAGCAAGGAGAGGCCATGGGCACTCCGGGGATGGGCATCATCAGTTTGGCCTAAGACCCAGTGACTTTGGCGCTGCCCCGGTCTTCCCTTCAAGCCGCTCCAGCTATCGAGCTGTGCAGCAGTAA</cdnaseq>

Protein Sequence

<aaseq>MAACRVRSPVPRAVEGEQVAAGWPPWLVSVAAEAVRGWVPRRAESFEKLDKIGQGTYSNVYRARDLEKEKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNIIKLEGLVTSRMSCSLYLVFEYMEHDLAGLASFPGVKFTESQVKCYMQQLLCGLEHCHSRHILHRDIKGSNLLIDNRGILKIADFGLASFFDPEQRHPLTSRVVTLWYRPPELLLGATNYGVAVDLWSSGCILAELYAGKPIMPGRTEVEQLHKIFKLCGSPSEDYWRKSKLPHATIFKPQHPYARRVSETFKDFPPPAVALVDVLLSVDPADRGTASSALQSEFFATKPYACNPSSLPRYPPSKEFDAKRREEEARRQGIAGGKQHKYDPERWTRESRAVPAPDANAELVSSLQKRQNQVNAKSRSEMFNPSKEDSASGFPIEPPRPTHPAESSQDSQRVYTRTFHSGPLVNQNKPSKAGRSENGDIHLSGVANASDFRVVVSTRSNISSDNGNGTVVTQAEAFPHERRLSESINERFSSSGKYDQVFQQKDDRSSRVDGAIGYGSKGNKIHHSGPLICPSGNVDQMLKENDRQIQEVFRRTRVEKSRARRGHGHSGDGHHQFGLRPSDFGAAPVFPSSRSSYRAVQQ</aaseq>

Gene Sequence

<dnaseqindica>1..153#1070..1354#1527..1844#2306..2533#3295..3395#3904..4015#4308..4751#5060..5320#ATGGCGGCGTGCAGGGTGAGGAGCCCCGTGCCGAGGGCGGTGGAGGGGGAGCAGGTGGCGGCGGGGTGGCCGCCGTGGCTCGTCTCCGTCGCCGCGGAGGCCGTGCGCGGGTGGGTGCCTCGCCGCGCCGAGTCGTTCGAGAAGCTCGACAAGGTCACACACTCTCTTCTCCTCTCTCTCTCTCTCTACATCTCCATTTTGGCTCTGTTCATTTTCTGCTCTCATCTTTGATCTCTAATTTGGAACATTGGAACGGCGAGAATTTGGAGCAATGCGGGCTGCGAATTCCCCCTTTTGGATTTCTGTTTCTCGTTGAGAATATAAATTGATGCATTAACAATGTGCTTCCCACCTTCATACTTTCTCTAATGGAAGGAAAAAAGGTAAAATTGGGCTGTAAAATGTGGGGAGTTTACCCCTCTTACAGGGATATTTACTGACGATTGATGAGGGTGGGTACTATCGCGATGTTTTTATTTGGGTTGTCTATTAAGTGGATTCTTGGTAGCTAGGACGACTGGAAACAGTACAAATCTGTTATTAGTGGGAGGCACCTTTTACGTTGGATGCGAAAATGCGGTGGCATTTTCTTTATTTTGGATTTCTTGATAATTTTGGTGGACCTTGGAACCTGGGAACAGTGGGCATTACTAGCAACTCATGCCCTTCTATTAATGGGGTGGGGTGAACAATGCTATTCTAGTAGTAGTACTACATTGCTATGGGATCTGAGAGTATGGTGGCAACTTTTTTTTTTCACCTGCAAACTTGGTTTAAAATTTAAATAGTAATAGTAATAATGTAATATATTCTGCTAACAGTTGATCCAGTTTCAGTTTAGCTGAATCACTGGTGTTTAGCTGTTATAATACCGCGGTTTCCTGTTTTGTTTGCTACGGGATACTTTATTTCTCTGAACTTCAAAATTTTAGGAACTTCTATTTGGTTGACAATTATGTCCCTTTTTCTTTGTAACTAGATTGTGCACTGTTAAACTTTACTTTGCACCTGGACTGATTGTGCCCTTTATACCATGGTGTGTTCAGTTGTTGTTATTTTGTTTATACAGATTGGTCAGGGAACATACAGTAATGTTTACAGAGCTCGCGATCTTGAAAAGGAGAAGATTGTTGCCCTAAAGAAAGTGCGGTTTGATAATTTGGAACCTGAGAGTGTGAAGTTCATGGCCAGGGAAATCCTTATTTTGCGACGGCTTGATCATCCAAATATTATTAAGCTGGAGGGTCTAGTTACTTCAAGAATGTCTTGTAGCTTATATCTTGTTTTTGAGTACATGGAACATGACCTAGCTGGACTAGCTTCTTTTCCTGGAGTGAAATTTACTGAGTCTCAGGTATATTGATATTACCTCTTCTGGAATCTGTACTCGTTATTAAATCTTATTAGCTGTAAAGAAAGACTAAAGGAATATATTGCATCCTATAGTAGTCCTAAAAAAGCCTCAAGTAGCTGTTTACTTAAAATACGAGTAAAGCAAGCGGGCAATGATCATTCTGTTGTTGCAGGTTAAATGTTACATGCAGCAGCTACTCTGTGGCCTTGAGCATTGTCATAGTCGTCACATTCTGCACCGTGACATTAAGGGTTCCAATCTTTTGATTGACAACCGAGGCATTTTGAAGATAGCTGATTTTGGCCTAGCAAGTTTCTTTGATCCTGAACAACGTCACCCTTTGACTAGTCGTGTGGTCACACTTTGGTATAGACCACCAGAACTTTTGCTTGGTGCCACAAATTATGGTGTTGCTGTAGATCTTTGGAGTTCTGGCTGCATTCTTGCTGAGTTATATGCTGGCAAGCCTATCATGCCTGGTAGAACTGAGGTATGCTGTCGACCACTATTTTACTTGGAAGTACTCCCTCCATTCATGTTTATAAGGTGCATTTTAATTGCAGAATGTTTTTAAGACTAAACTTTGACCACTAATTTCTCATTAAATATAATCCCAATAGCTGTAAAACCAATATTATGTGAAATTACTTTGAAGTATGAATCTAATGCTATAAGTTTGACACACTAAATGTGCTTGTATGGTACTCCCTCTGTCCAAAATACAACAACTTCTAGCTATGTATCTGGACAGGGGTATGTCTAGATACATAGCTAAAAATTGTTATATTTTGGGACAGAGGTAGTAACTAATCATTGGTCAAAATCTTTCAAATTTGAATTTCTGTAATCAAAACACGTTTTATAATAGTGGGCAGAAGGAGTAAACGCTATTAGTGAATGCTTTGAATTTGTCTTGAAATAGTGTTCATATTGTTTTTTTTCTTTTTGTAGGTTGAGCAGTTACATAAAATATTTAAACTCTGTGGTTCACCATCAGAGGACTATTGGAGGAAGTCTAAACTTCCTCATGCCACAATTTTTAAGCCACAGCATCCATATGCTAGGCGTGTATCAGAAACATTTAAAGATTTTCCTCCGCCTGCTGTGGCGTTAGTGGATGTTCTTCTTTCAGTTGATCCAGCAGATCGAGGAACAGCATCTTCTGCATTGCAAAGCGAGGTATTCAAATTCCTTGGACTTTTCTCCAGCTGCTGGAGACATTCCTGTTTATTTCCATATAGAGATTCTTTTTTATTTCGAGAGAGAATCCATATAGAGATTCTATTTGATTATACGTTACTCATTTCAATTCTCAATTGTCCCCTCTGTTTACAAATGTATGTCAACATGGCATGTGTGCCGTGAACTCTCAGACAATAAATGCTAACCCACATAACACTATCAAGATTAATCAGATGAAAGCCTTACCATTACATTTGCTGTAAAATAATACTCTCACTCTCTCAGAATATAAATTAAAAGTAACAGTCAAAGGCACATGTTGGAGAGCGTACAATTCCAGAAACACCAGAGATTTGTAACAGAGGGAGTAATGTGCTGCATTCAAATATTCCGCTGTTTGAAGTTTTAAAATAGCAAAGTATCACTGTTAAAACGTTATTTTCCTTTTTTTTAGAAACTTCAGATCAGCTATATTTGTTTGGAAGTAAATACTTTCTGCAAAATAATTCCTCCTGAACCATCTCTAATGTCTATGAAAGTCATCATGTCCTAGTTGGATCAAGGTTTTGGATTTAGAAGTATAAAAGCTCTGTTGCTATTCATTTCTGTGTACCATGATCCACTAGATGTTATGTTAGAGGAGGTTGTTAATCTTTCACAATACATCTCAAAAGTTTTTTTTTTTTTTTTTTACTTTTAATCATCATAGTACCCAATCTTTGGGATATTAACAATGTGCTTGTTATTGTCTTCTTCAGTTTTTTGCAACAAAACCATATGCTTGCAATCCTTCAAGTCTGCCGAGATATCCCCCAAGCAAAGAGTTTGATGCAAAACGGCGAGAGGAGGAAGCTCGGAGGTACTTACGACAAACATTATGTTTACAATATTACATCTTATCTCTGAATCATAAAACTTCCTTAGAGAACTTGGATCAATGTTCTGCTGACCTATGCATACCTTCATGGCTTCATAATAATAAGGAAAACACACTCTTGCAAATTAGAGTGTTAAAGTCAATCAACAGGTGTATCATGAATCTGACCTTATCACCGATTTTATACCTGGCTGGTCGTGTGCATATGGTATCAGCTGACCAGATATATAATATGATTGGACCCATTCCTGTTCTGGTATTCTGCATTCCACTCTGGAACCTCTCTCCCCCCTCCCACCTCCCCTATTTCTACGTATTTCCCTGTGTTATAAACATCTTTTACACATGAATTCACTTTTATTGTCTATAGTTCTTGTCTGTGTTTATTTGTCTCTATACTTTTAGTGCTTAAATGGAAAAGAAACAATCTTATCATGAATCTGCAATGCCTGCATTTTCTTTCAAAATTGACATTTGCACATTTCTGTAGGCAAGGTATTGCTGGAGGAAAGCAACACAAGTATGATCCTGAAAGATGGACTAGAGAGTCGAGAGCAGTTCCTGCACCTGACGCAAATGCAGAATTAGTGTCATCTTTGCAGGTAATACCTTGTTGACTGTTATTGAATATATTGTACTATTCATATTTAGGTTGATGAGGTATATCCGTATATGCTTATTTGTAAGTTACATTCACATACATAGTGATCACTGGCTCTATATTGTGATCTTCATATGTGTCTAAGCTGTGCGCTTTGTCTCCTTTTTTTCCACAAGTACATGAAGCCTTTAATAGCCAGCACACATTCCAAGTGTATTTTTCCTCTACAATCTTGCTATCCAAGTTGTTCTATTTTTTTAGATGAATATATTTATTTTTGTGTACAATTTCAGAAAAGACAAAACCAAGTCAATGCCAAGAGCAGGAGTGAGATGTTCAATCCCAGCAAGGAAGACTCTGCATCTGGCTTTCCGATTGAGCCACCCAGGCCAACTCATCCTGCTGAATCGTCTCAAGACTCTCAACGTGTCTACACAAGAACATTCCATTCTGGGCCTCTAGTTAATCAAAATAAACCTTCAAAGGCTGGACGGAGTGAAAATGGCGATATTCATCTTTCTGGTGTTGCAAACGCATCGGACTTCCGTGTGGTTGTATCAACAAGATCAAATATTAGTTCAGATAATGGCAATGGAACAGTGGTTACTCAAGCCGAAGCCTTTCCGCATGAACGGAGGCTGTCTGAATCTATAAACGAGCGTTTCAGTAGTAGTGGAAAGTATGATCAAGTATTTCAGCAGAAAGATGACAGGAGTAGCAGGGTGGATGGAGCTATTGTAAGTATCTCCAGACCTAAGTAGCAAAAGTATGAAAACAGTTTGTTATGCCATTTAATTCATAGTTGGCAGTTTTTTTGCAAATCTCAGTTGTCAAATTGAAAAGTTTCTTTCAGCAAATCCAAGGTCCTCATATATTATGTATTCAGTTCCAGCAGGTTATTATGAGGTTTACCTAGCATTATTTGTAGTTCACGATTAACACATTTGGAAAAACCGAAAAATATTATAGCACTAGCTTTGATGTCAGATAACTTTACTTTGTTCCCCTGTCTAGATTTCTAATTGACTATTTCTTGTCTGAACAGGGCTATGGATCAAAGGGTAACAAGATCCACCATTCTGGGCCTCTAATTTGCCCTTCAGGCAATGTCGATCAGATGCTGAAGGAAAATGACCGCCAAATTCAAGAAGTCTTCCGCCGAACCCGGGTTGAGAAGTCAAGAGCAAGGAGAGGCCATGGGCACTCCGGGGATGGGCATCATCAGTTTGGCCTAAGACCCAGTGACTTTGGCGCTGCCCCGGTCTTCCCTTCAAGCCGCTCCAGCTATCGAGCTGTGCAGCAGTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA002955