BGIOSGA002993

From RiceWiki
Revision as of 10:45, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA002993| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA002993, complete gene.| tag = OsI_008...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA002993

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA002993, complete gene.

LocusTag

OsI_00887

Ensembl Transcript ID

BGIOSGA002993-TA

Ensembl Protein ID

BGIOSGA002993-PA

Length

2977

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:6714072..6717048

Sequence Coding Region

6714072..6714624,6714710..6714858,6714954..6715227,6716831..6717048

Genome Context

<gbrowseImage1> name=IndicaChromosome01:6714072..6717048 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:6714072..6717048 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGGCCAACAAGGCCGTCGTCGTCGTCGCCGCCGTCCTCCTCCTCCTCGCCGTCGTCGCCCGGCGAGCGTCGTCGCAGAGCTACAACGCGATATACAACTTCGGTGACTCCATCACCGACACCGGCAACCTCTGCACCGGCGGCTGCCCGTCGTGGCTCACCACCGGCCAGCCTCCCTACGGCAACACCTTCTTCGGCCGCCCCACCGGCCGCTGCACCAACGGCCGCGTCATCATCGACTTCCTAGGCACGCACGACGCATTTTCACCTCGGATCGATTCTGCACAGAATTTTCACTGCAAATTAAAAGATGATGAGCTTAATTTGTTCGCGCGCGCAGCTGATCGCTTCGGATTGCCGCTGCTCCCGCCGTCGAAGGCGAGCGGCGGCGACTTCAAGAAGGGCGCGAACATGGCCATCATCGGCGCCACCACCATGAACTTCGACTTCTTCCAGTCGCTCGGGTTGGGCAACAGCATCTGGAACAACGGCCCTCTCGACACCCAAATCCAGTGGTTCCAGCAGCTCTTGCCCTCCATCTGCGGCAACGATTGCAAGAGCTACCTGAGCAAGTCTCTGTTCATCGTGGGCGAGTTCGGGGGCAACGACTACAACGCCCCTCTCTTCGGCGGCAAGAGCATGGACGAGGTGAAAGGCTACGTGCCTCAGATCATCGCCAAGATCACAAGCGGCGTAGAGACGCTGATCGGGCTGGGAGCGGTGGACATCGTGGTGCCGGGGGTGATGCCGATCGGGTGCTTCCCGCTGTACCTGACGCTGTACCAGAGCTCCAACTCCGACGACTACGACGGCAATGGCTGCCTCAAGAGCTACAACTCCCTCTCCGTCTACCACAACGGCCTGCTCAAGCAGGGGCTCGCCGGCGTCCAGGCCAAGTACCCGGCCGTCCGCCTCATGTACGGCAACTTCTACGACCAGGTCACCCAGATGGTTCAGTCTCCCGGGAGTTTCGGGCTACAATATGGCCTGAAAGTGTGCTGCGGCGCCGGTGGGCAAGGCTCCTACAACTACAATAACAAGGCGAGGTGTGGCATGTCAGGGGCAAGTGCCTGTGGAGACCCGGAGAATTACTTGGTCTGGGATGGCATTCACCTCACCGAGGCTGCCTACCGTTCGATCGCGGATGGATGGCTCAGCGGGCCATACTGTAGCCCAGCTATTCTGCACTGA</cdnaseq>

Protein Sequence

<aaseq>MAANKAVVVVAAVLLLLAVVARRASSQSYNAIYNFGDSITDTGNLCTGGCPSWLTTGQPPYGNTFFGRPTGRCTNGRVIIDFLGTHDAFSPRIDSAQNFHCKLKDDELNLFARAADRFGLPLLPPSKASGGDFKKGANMAIIGATTMNFDFFQSLGLGNSIWNNGPLDTQIQWFQQLLPSICGNDCKSYLSKSLFIVGEFGGNDYNAPLFGGKSMDEVKGYVPQIIAKITSGVETLIGLGAVDIVVPGVMPIGCFPLYLTLYQSSNSDDYDGNGCLKSYNSLSVYHNGLLKQGLAGVQAKYPAVRLMYGNFYDQVTQMVQSPGSFGLQYGLKVCCGAGGQGSYNYNNKARCGMSGASACGDPENYLVWDGIHLTEAAYRSIADGWLSGPYCSPAILH</aaseq>

Gene Sequence

<dnaseqindica>1..553#639..787#883..1156#2760..2977#ATGGCGGCCAACAAGGCCGTCGTCGTCGTCGCCGCCGTCCTCCTCCTCCTCGCCGTCGTCGCCCGGCGAGCGTCGTCGCAGAGCTACAACGCGATATACAACTTCGGTGACTCCATCACCGACACCGGCAACCTCTGCACCGGCGGCTGCCCGTCGTGGCTCACCACCGGCCAGCCTCCCTACGGCAACACCTTCTTCGGCCGCCCCACCGGCCGCTGCACCAACGGCCGCGTCATCATCGACTTCCTAGGCACGCACGACGCATTTTCACCTCGGATCGATTCTGCACAGAATTTTCACTGCAAATTAAAAGATGATGAGCTTAATTTGTTCGCGCGCGCAGCTGATCGCTTCGGATTGCCGCTGCTCCCGCCGTCGAAGGCGAGCGGCGGCGACTTCAAGAAGGGCGCGAACATGGCCATCATCGGCGCCACCACCATGAACTTCGACTTCTTCCAGTCGCTCGGGTTGGGCAACAGCATCTGGAACAACGGCCCTCTCGACACCCAAATCCAGTGGTTCCAGCAGCTCTTGCCCTCCATCTGCGGCAACGGTAAATCAATGCTCAAATCAAATCATTTCTGTTTTCATTTTTTGGTTTTTTTGAGAGGGATTTTGTTCTTCCTGAACAATCGCAGATTGCAAGAGCTACCTGAGCAAGTCTCTGTTCATCGTGGGCGAGTTCGGGGGCAACGACTACAACGCCCCTCTCTTCGGCGGCAAGAGCATGGACGAGGTGAAAGGCTACGTGCCTCAGATCATCGCCAAGATCACAAGCGGCGTAGAGGTACAAAACCATCGCCGATCGATCGAAATTGGCAACAAGATTTTCTACAGATTTCTAAGCAATCAATACATCAATCACTACTGTTGTTGATGCAGACGCTGATCGGGCTGGGAGCGGTGGACATCGTGGTGCCGGGGGTGATGCCGATCGGGTGCTTCCCGCTGTACCTGACGCTGTACCAGAGCTCCAACTCCGACGACTACGACGGCAATGGCTGCCTCAAGAGCTACAACTCCCTCTCCGTCTACCACAACGGCCTGCTCAAGCAGGGGCTCGCCGGCGTCCAGGCCAAGTACCCGGCCGTCCGCCTCATGTACGGCAACTTCTACGACCAGGTCACCCAGATGGTTCAGTCTCCCGGGAGTTTCGGTACGTCAGAACTTCAGATTCATGAAAAGTTATTTCCCCTTTTAATTAATTAGCTCTATAAACTTGGCATTGCAAACGATCAAAGCAGTATCAGGGTGAAACTAACAGTCGATTAATTAGCGAAAAGCCTGAAACTTTGAATCGTTCAGGACAGGCGGCTAAGATAGCTAGCACTGAATGATCCAAAATGTGAAATTGATGACTATGAGCACCGCTCCTGCGAGTAGATTGACACGCACTACTTGTGACGCCACCGGCTGCGTTCGGCAGCAGTAGATTTTGAGAGAAAATGACAATATGCCACTCCATTCGTTGGGTTTAGATGAAATGCCATCCACTAAAATGCAAATGATAAAATACCACTCAATATGTTACCTTCAGGATATTTTGCCACTTTAGAAAATTTTAAGACCAAAATACCCTTTGCCTGTGAAGAGAGAGGAAGAAAGGGAACGGCTCTGCTTACCAATGACGGAGGACGGCGGCGCTGACGGGAGGGAGGGGGACGGCGGTGATTGGTGGAGGAGGACGGCGGCGCTATCGGGATGGCTTCGCGCGCTCGCAGCTTGCCGCCTCCGGCGCCGCCCGAACATGGGCGTGCGGCACCGCCGTCCTCCTCCCCTGTCGTCGCCCGCCCTTGCGCACTCACCACCCGCCGACGGTGAGCACGGAGCCACGGATGCCGCCCAGCTTGACCTTCTCTGGCGCTGCTCTCTTCTTTCTTCCTCTTTCTCCACAGCCAAGGGTATTTTAGTATTAAAATCCCTTAAAGTGGCAAAATATTTTGAAGGTAATCTATTGAGTGGCATTTTAACCTTTGCATTATAGTGGGTGTCATTTCGTCTAAACCCAATGAATGGAGTGGCGTATTGTCCTTTTTCTCTTTTTTCACACCCACGTTTCTCGAAAGGTTAAAATGTTGTTTTTGAAAAAGAACTTATCTACATAGAAGTTACTTTAAAAATATATATTGATTTATTTTTCAAGCTAAAAATAATTTATACTTAATTATTGATGATGCGCTAATGGCTCAACTCAATGTACACATTTTCTCAATTTTCTCCTTTTCACCTCCTCTCCTCTCAAACATAGCAGACACAACACCAGTGTAATAGTAGCACACATCACTCTCCTGTATAAGACAAATGCAGCTGGGCTCAGCGAGGCTGCAAGCGTCTCAGGCTCTCAGCCATGACGTGATCAGGTTTGGATGGCATCCTGGGTGATCAGGTTCAGGCCACGAGATGGGGTACAGATCCAGTGATCCTCCCGGTATAAGAACACTTGCAGTGGGCACATTGTTCGTCTGAAAGGTCTAGCCCAACTAACCGGAAATCCGGAATAACAAACACACTCATTACGCACTAGCTGCGTGTACCTGAACATGACACAATTGACACGGACATTTGCACATAATGCAACACATGGCCTTCTTAATTGCCAGGCAAATGTTCAGATTGATTGGCCAGATATGTATCTCTCTGTACCATGATAGCAAAAAGAACTTGCATTCTAACGTTCAGTACCTGCCTGAACACTGTAGCCACATTATTAAGGACTAGTAATGTACTGATATTATGTATGGTTTGTAATGTTTTTGCAGGGCTACAATATGGCCTGAAAGTGTGCTGCGGCGCCGGTGGGCAAGGCTCCTACAACTACAATAACAAGGCGAGGTGTGGCATGTCAGGGGCAAGTGCCTGTGGAGACCCGGAGAATTACTTGGTCTGGGATGGCATTCACCTCACCGAGGCTGCCTACCGTTCGATCGCGGATGGATGGCTCAGCGGGCCATACTGTAGCCCAGCTATTCTGCACTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA002993