BGIOSGA002998

From RiceWiki
Revision as of 10:45, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA002998| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA002998, complete gene.| tag = OsI_008...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA002998

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA002998, complete gene.

LocusTag

OsI_00893

Ensembl Transcript ID

BGIOSGA002998-TA

Ensembl Protein ID

BGIOSGA002998-PA

Length

1395

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:6750324..6751718

Sequence Coding Region

6750324..6750567,6750680..6751047,6751114..6751381,6751465..6751718

Genome Context

<gbrowseImage1> name=IndicaChromosome01:6750324..6751718 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:6750324..6751718 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGATGCAGAAATATCTGTGGATACAGATTTTTGTGTTGCTCTCGAGCTTCTCCTTCTCGGTTGAGACGGATTACGCCTCCATTTTTAGCTTCGGAGATTCCTTCTCCGACACCGGCAACATCGTCCTCATCTACGGTCCGGCGAGAACCGACCTCGTGATGACCAAACCGCCGTACGGAATGACATTCTTTGACCATCCCAGCGGCCGCCTCTCCGATGGAAGATTGATCATCGATTTCATCGCCGAAGCGCTGGGGCTCCCTCTGCTTCCGCCGTCGTTCGCGGCGAACCGGAGCTTCGAGCATGGCGCCAACTTCGCGACGGCCGGCGGCACGGCGCTGGACCGCGCGTTCTTCGTGGCCAACAACTTCACGGTGATGTCCCCGTTCAACATCTCGCTCGGCGACCAGCTCGGGTGGCTCGACGGCATGAAACCGTCGCTCTGCGGCGGCAAGCCAGGTGGGTGCGAGGGTTACTTCTCCGAGTCCCTGTTCTTCGTCGGCGAGCTCGGATGGAACGACTACTCCGCCGTGCTGCTCGCCGGCAGGGGCGTCGACGAGGCGAGGTCTCTCACACCCCGAGTCGTCGGAACCATCCGCGCGGCCACACAGCCAGAAACTCATCGACGGCGGCGCGAGGACGGTGTTCGTGTCGGGAATCACGCCGATGGGGTGCTCGTCAGCGAACCTCGTGCTGTTCGCGGGCTCAAGCGAAGCGGACTACGAGCCGGACACCGGCTGCCTGAGGAGCCTGAACCTGCTGTCCATGGAGCACAACCGCAGCTACGCCACGCCCTGGCGCAGCTCGGCGGCGCGAGGATCATCTACGGCGACTTCTACACCCCCCTCGTCGAGCTCGCCGCGACGCCGCGCCGCTTCGGGATCGACGGGGAGGAGGGCGCGCTGAGAGCTTGCTGCGGCAGCGGCGGTGGGCGGTACAACTTCAAGTTCAACATGAGCGCGCAGTGCGGCATGGCGGGGGTGACCGTGTGCGGCGACCCGTCGGCGTACGTGAACTGGGACGGCGTGCACCTCACCGAGGCGGCGTACCACCACGTCGCCGATGGGTGGCTAAGGGGGCCGTACGCGAACCCGCCCCTACTCAGCTCGTCGTGTTCGGCGCGAGCGCGATAG</cdnaseq>

Protein Sequence

<aaseq>MMQKYLWIQIFVLLSSFSFSVETDYASIFSFGDSFSDTGNIVLIYGPARTDLVMTKPPYGMTFFDHPSGRLSDGRLIIDFIAEALGLPLLPPSFAANRSFEHGANFATAGGTALDRAFFVANNFTVMSPFNISLGDQLGWLDGMKPSLCGGKPGGCEGYFSESLFFVGELGWNDYSAVLLAGRGVDEARSLTPRVVGTIRAATQPETHRRRREDGVRVGNHADGVLVSEPRAVRGLKRSGLRAGHRLPEEPEPAVHGAQPQLRHALAQLGGARIIYGDFYTPLVELAATPRRFGIDGEEGALRACCGSGGGRYNFKFNMSAQCGMAGVTVCGDPSAYVNWDGVHLTEAAYHHVADGWLRGPYANPPLLSSSCSARAR</aaseq>

Gene Sequence

<dnaseqindica>1..244#357..724#791..1058#1142..1395#ATGATGCAGAAATATCTGTGGATACAGATTTTTGTGTTGCTCTCGAGCTTCTCCTTCTCGGTTGAGACGGATTACGCCTCCATTTTTAGCTTCGGAGATTCCTTCTCCGACACCGGCAACATCGTCCTCATCTACGGTCCGGCGAGAACCGACCTCGTGATGACCAAACCGCCGTACGGAATGACATTCTTTGACCATCCCAGCGGCCGCCTCTCCGATGGAAGATTGATCATCGATTTCATCGGTAAATGTCTTTCCAATTGTGTTTGATTCAATTCTTGGCTTCTTGCTCGTGCTTCGATCGAATTGCCAAAATTTGTCGAATTGACAATGGCGTTTGATTTACTGTTTTGTAGCCGAAGCGCTGGGGCTCCCTCTGCTTCCGCCGTCGTTCGCGGCGAACCGGAGCTTCGAGCATGGCGCCAACTTCGCGACGGCCGGCGGCACGGCGCTGGACCGCGCGTTCTTCGTGGCCAACAACTTCACGGTGATGTCCCCGTTCAACATCTCGCTCGGCGACCAGCTCGGGTGGCTCGACGGCATGAAACCGTCGCTCTGCGGCGGCAAGCCAGGTGGGTGCGAGGGTTACTTCTCCGAGTCCCTGTTCTTCGTCGGCGAGCTCGGATGGAACGACTACTCCGCCGTGCTGCTCGCCGGCAGGGGCGTCGACGAGGCGAGGTCTCTCACACCCCGAGTCGTCGGAACCATCCGCGCGGCCACACAGGTGATCAGATCACGGACGAACACCTTGCACCATTAACACTTTTTACTCAACTCAACTTCTCTTGAGCCAGAAACTCATCGACGGCGGCGCGAGGACGGTGTTCGTGTCGGGAATCACGCCGATGGGGTGCTCGTCAGCGAACCTCGTGCTGTTCGCGGGCTCAAGCGAAGCGGACTACGAGCCGGACACCGGCTGCCTGAGGAGCCTGAACCTGCTGTCCATGGAGCACAACCGCAGCTACGCCACGCCCTGGCGCAGCTCGGCGGCGCGAGGATCATCTACGGCGACTTCTACACCCCCCTCGTCGAGCTCGCCGCGACGCCGCGCCGCTTCGGTGAGCCGCGCCATAGCTCAGACCTCAGAGCTAATTAAGCTTCTGGATTTTCATGTCACCGGAACATATATATGGCGGCGCAGGGATCGACGGGGAGGAGGGCGCGCTGAGAGCTTGCTGCGGCAGCGGCGGTGGGCGGTACAACTTCAAGTTCAACATGAGCGCGCAGTGCGGCATGGCGGGGGTGACCGTGTGCGGCGACCCGTCGGCGTACGTGAACTGGGACGGCGTGCACCTCACCGAGGCGGCGTACCACCACGTCGCCGATGGGTGGCTAAGGGGGCCGTACGCGAACCCGCCCCTACTCAGCTCGTCGTGTTCGGCGCGAGCGCGATAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA002998