BGIOSGA003041

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Revision as of 10:45, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA003041| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA003041, complete gene.| tag = P0492F0...")
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Gene Name

BGIOSGA003041

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA003041, complete gene.

LocusTag

P0492F05.33-1

Ensembl Transcript ID

BGIOSGA003041-TA

Ensembl Protein ID

BGIOSGA003041-PA

Length

3886

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:7434281..7438166

Sequence Coding Region

7434281..7434468,7434596..7434971,7435064..7435147,7435251..7435316,7435816..7435888
,7436742..7437127,7437523..7437563,7438070..7438166

Genome Context

<gbrowseImage1> name=IndicaChromosome01:7434281..7438166 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:7434281..7438166 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGTTCCGACCACCGGGTGCTTTCGGGGTCGCACCCCCGCCGCCGCCGCCGCAGCAGCAGCAGCAGCATCAGCCATGGCAGTGGCAGCCGCCTTTCCAGCCGCCGGCCGCTACATCCTTTTGGCAGCGGGACAATGTGCGGGAGCATGTGGGGAGGCTGCAGGAAACCATCGAATTAGCCACTGCAGTGATAAATGAGCTCGAGGAAATTGCGCAGGCTAGAAACTCGGTCGATGCTAGCACGCAAGGACCTGACTCGTCTTCAGCAAAATTGTCATCAGAGCCTGATGGTTCTTCTGCAGATAGGCCCCGGCATTTCGTTGAGCTTGCTAGAGCTATGAAGATTAGTCAAGACACTCATGAGTCTCTGGCCACAGATGCTGCTAATTATCTTTGTTCTCAGATTCAGAACCTTCTTGCACCTATTTATCCTGCTGTGAACCAAAGGGGTCCTTGGGAAGAGAGGTCTGCAATGATTAGGTTAGCTCAGAAGCTGCAGAAATCCAAGAGAAATAAGCGATGGAGAAAGAGAGAAAGAAAGCATGTTGCAGAGCTTTTCCAGAAGGAGCATGCAGATTATGACAGAATTGATCAGGAAGCTGATGAATGGAGGGCTAGGCAAATAGCCAAGGACATGGCGCAGCGCAAGGTGGAAAACATGAAGCAGATTGCCAAGAAAAAAGCAAATGAGGAAAGAAAGCGTCTAGAATCTGAGCTTGAGCTTGCCCTAATGGTCGAGAAACTACAGGAGCTTCGCTCTATGAGAGTTCAAAAAATGAAGAAACAAGGTCATTTTCTGCCAGAAGAAGATGATAAATATCTTGAGCGTGTTAAGGCTGCAGTTGAGGAAGAGGAGCGCCAAGCTGCAAGTGCTGCTCGGACTGATGCTGCCAAGGATGCTATTCTGACCGCGGAAGAGTCGAGGAAGGCTGTGCAGTGTTCAAATTCAAGAGAAGATGATTCTGATCAAGCCAAAAGTGCACCAACACTGGAACAAAACCAGAGAGATCCAGGAATAAGCGGCAGAAATCATCATGCAAGCCAAAAAACAGAGCATGAACTTCATAAAGATGACAGCAAAGGGCATGGGCATTATGATTCTGTTTCCAGTCTGCCTTTTGAGTTCTACCATTATTATCATGGAAGCAGCTACGACATGGGAACACTCATTGAGGTCCGCAGGATGTGGGATTCCTTTATTAGAGCTGGAGGAAGCCGAATACCTGGGCACTGGGTTCAGCCACCCCCTCCAGCTGATGAAGTATGGGCATCCTATTTAGTGCAGCCCAACTGTCCAAGTAACTCCACTTAG</cdnaseq>

Protein Sequence

<aaseq>MFRPPGAFGVAPPPPPPQQQQQHQPWQWQPPFQPPAATSFWQRDNVREHVGRLQETIELATAVINELEEIAQARNSVDASTQGPDSSSAKLSSEPDGSSADRPRHFVELARAMKISQDTHESLATDAANYLCSQIQNLLAPIYPAVNQRGPWEERSAMIRLAQKLQKSKRNKRWRKRERKHVAELFQKEHADYDRIDQEADEWRARQIAKDMAQRKVENMKQIAKKKANEERKRLESELELALMVEKLQELRSMRVQKMKKQGHFLPEEDDKYLERVKAAVEEEERQAASAARTDAAKDAILTAEESRKAVQCSNSREDDSDQAKSAPTLEQNQRDPGISGRNHHASQKTEHELHKDDSKGHGHYDSVSSLPFEFYHYYHGSSYDMGTLIEVRRMWDSFIRAGGSRIPGHWVQPPPPADEVWASYLVQPNCPSNST</aaseq>

Gene Sequence

<dnaseqindica>1..188#316..691#784..867#971..1036#1536..1608#2462..2847#3243..3283#3790..3886#ATGTTCCGACCACCGGGTGCTTTCGGGGTCGCACCCCCGCCGCCGCCGCCGCAGCAGCAGCAGCAGCATCAGCCATGGCAGTGGCAGCCGCCTTTCCAGCCGCCGGCCGCTACATCCTTTTGGCAGCGGGACAATGTGCGGGAGCATGTGGGGAGGCTGCAGGAAACCATCGAATTAGCCACTGCAGTGTGAGTTCCTGAACCGCCTAAAGCTAGCGATAATCATGCAACTTTGTCTCAAAATCGAAGGCATTTCCTTTATTGCTAATTTATTAGACCTTTTTTTTATGGACTGAAAATGGAATTGAATTGGCAGGATAAATGAGCTCGAGGAAATTGCGCAGGCTAGAAACTCGGTCGATGCTAGCACGCAAGGACCTGACTCGTCTTCAGCAAAATTGTCATCAGAGCCTGATGGTTCTTCTGCAGATAGGCCCCGGCATTTCGTTGAGCTTGCTAGAGCTATGAAGATTAGTCAAGACACTCATGAGTCTCTGGCCACAGATGCTGCTAATTATCTTTGTTCTCAGATTCAGAACCTTCTTGCACCTATTTATCCTGCTGTGAACCAAAGGGGTCCTTGGGAAGAGAGGTCTGCAATGATTAGGTTAGCTCAGAAGCTGCAGAAATCCAAGAGAAATAAGCGATGGAGAAAGAGAGAAAGAAAGCATGTTGCAGAGCTTTTCCAGAAGGTGCGCTCATCAATACGTTTTTCTGTTTATATTGTGATCAAATCAAAGTGACAACTGACCATAATGACATCAATTGTCTTGATGTTTCACAGGAGCATGCAGATTATGACAGAATTGATCAGGAAGCTGATGAATGGAGGGCTAGGCAAATAGCCAAGGACATGGCGCAGCGCAAGGTTCTTTCTCATTTTTGAATTTGTCATTTTGTTAGTGGGGTTGTTTTGGGTAAGATACACTGTTGCTCCACAGATGATCAATTCATTGATACTGTGAAATCAGGTGGAAAACATGAAGCAGATTGCCAAGAAAAAAGCAAATGAGGAAAGAAAGCGTCTAGAATCTGAGGTAAAGTTAATGCTTACATTGTGGTGTGGAAATCCTGCTTGTCTGTGGACATCTGCGTGGAAATTGTGAGCGCTATGTTTCATTAATTCATTTTCATACACTGCTGAATTACTATACATTGTGATACCTTGAGTTATGAATTTTGTTAAGTTGTAGTAAGCATTAAGTTACACCATTTTTTATCTTTGACCTTATCTGATTTTCTACGAATTTAGGAAACTCTATAAGCTTGCTTCTAAAATTTCTTAAAGTCTTGTATATTTGTGTTTGATATGCTGCAACCCAACATCTTCAATTACACCACCTACCTACCTGTTTTCTTTCATTCAGAATTATTGTGCAATCAGTTTGTGAATTCTTGAGTGGTTATTTCAGTATGTTATATTTAGATTCCAAACTATTAATATTCTCTGTAGAAATTGTAAATTCAAGAGCGGCAAATACAATAGTCTTGTTTTCTAGAAAACTAATTTTCTCAATACAAATCTTCTATTTTCAGCTTGAGCTTGCCCTAATGGTCGAGAAACTACAGGAGCTTCGCTCTATGAGAGTTCAAAAAATGAAGAAACAAGGCAGGATATATTCATCTACCCATTATTTTTAAGAATTTCCTTCTTTTTATTTATTTCAATATATGAGTCCAACCTATAGTCATAATCTAAAGAGGTGCAAAATGTGGGAAATGGTTAATACATGGGGGTCAATCTTACTGTAATGGGTCAATCACATTGTAATGCTTCAAGAATTTGTCCCTTGTTTAAATGATTGCCAAATTTTGGCATTCCCATTCTTCTCTGTCATATCTGATGCATTTCTTGCCAATCTGTTGTCCAAATGGGTGGTGTCTGAAAACTTCACAAAAATATTTGCTATAAAATTATGGTAGGCTCGCGCGAACACACTAAGGCCCTGTTTGTTTCAGCTTATGATTATTATAATCTAGATTATTAAGCCAGATTACTATAAGCTGGATTATAATAAGCTAGCATAGAATAAGCTGTGAGTTGTTTGTTTGTCTGGATTATTGAAGGCATGGATTATTGGGTCTGAAAGGCTAAAGTCTATAATGCCCTCAGCTATCTGTTCGGTTGATGGCATAGGTGGGTAATTTTTCTCAAGTATGTAGGGGTAGTGGGTCTTTAGCCACTCAATAATCTGAAAAAAGCTCCTCTAGAGCAGCTTATCAGATTATAATAATCTGGCTTATAGATTATAATAATCTGCTATAATTATCTACTTGTTTGTTTCAGCTTACTCCTAATAAGCTAGATTATAATAATCCTAAGCTGAATCAAACAGGGCCTAAAATCACTTGCAAACTTTGCCTTTTCCTTGTTAATAGTTGTTTTTTTCCCCTGTTTTAGTACAGTTGATCAACCTAAACACATGGAACTGATGCATGAGTTACCATGTAATATATTTCAGGTCATTTTCTGCCAGAAGAAGATGATAAATATCTTGAGCGTGTTAAGGCTGCAGTTGAGGAAGAGGAGCGCCAAGCTGCAAGTGCTGCTCGGACTGATGCTGCCAAGGATGCTATTCTGACCGCGGAAGAGTCGAGGAAGGCTGTGCAGTGTTCAAATTCAAGAGAAGATGATTCTGATCAAGCCAAAAGTGCACCAACACTGGAACAAAACCAGAGAGATCCAGGAATAAGCGGCAGAAATCATCATGCAAGCCAAAAAACAGAGCATGAACTTCATAAAGATGACAGCAAAGGGCATGGGCATTATGATTCTGTTTCCAGTCTGCCTTTTGAGTTCTACCATTATTATCATGGAAGCAGCTACGACATGGGAACACTCATTGAGGTAACTTATGCTGGCTTTTCAACTTCATGCTACCATTAAGGTTTTGTGGAGTGTATAAGAATAAGACAGTGTAAATTTGAACTAGGCTTTGCACTATCAGTCTATCACAGCCAAAATTCTGAACTAGGCTTTACATATCAATCTATCAGAGTCATAGATATGGCATGGCGGGTTTCACACTTCCATTGAATACCATAATTGGCTCATCTGGGAGTTTTGCGAATGCTTTATGTGTTAATCAGTTAATGTGATTTCTACCAAGTGAATGTTTTAGGATGATCCTATCGATGGTCTCATATCAATGCAAATGTGCAATTACTGAATATGTTTTTTGATTGGGAATTACTCAATAGATTCACTCAGCCATCATGTATGTATTCCACCTTTGATTGCAGGTCCGCAGGATGTGGGATTCCTTTATTAGAGCTGGAGGAAGGTATGACTTTCACTCTGCTAAATATAATATGCAAACTAAATTCACTCAACAAGCATCTTTGCCATACAACAAAAAACAATGGAAATATATTTTGCTGATTCTCTGAAGAACTAATACCAAGATGAGAAAAAAAGAACTCATGAGAATATATAATGTTCTATTGATTTGGGTTATATATGAGGTTTATGCCATAGGAAAGTGCAATCTCTTTTAGTAAACAGAATGATGGTTGTTGGATACATTCGAAGTTTGTTGGGCTACTTGTATAGTACTCTGGAACGCTTTCTTGTAATTTCAGTACTGGGATAGCATTATAGTGCTGAATGTCCTGTGGTTCTTTCAAGCCATCTACTAATAACTTATGGTAGCATTCATGTTATTTTATTGAAGTGCTCTGATGATAGGATTTAGTACATTGTGCTCTTGATTGTAGTGCTTTACCATGTGAAACGAATTCTATGTAGCATTCTCTTATTTAACAATGCAATTGTCTCACCTGCCTGCAGCCGAATACCTGGGCACTGGGTTCAGCCACCCCCTCCAGCTGATGAAGTATGGGCATCCTATTTAGTGCAGCCCAACTGTCCAAGTAACTCCACTTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA003041