BGIOSGA003261

From RiceWiki
Revision as of 10:48, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA003261| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA003261, complete gene.| tag = OS01G02...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA003261

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA003261, complete gene.

LocusTag

OS01G0279200

Ensembl Transcript ID

BGIOSGA003261-TA

Ensembl Protein ID

BGIOSGA003261-PA

Length

6609

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:10826611..10833219

Sequence Coding Region

10826611..10826620,10826709..10826801,10829179..10829257,10830579..10830819,10830902..10830976
,10831068..10831202,10831743..10831930,10832024..10832092,10832169..10832259
,10832371..10832505,10832932..10833044,10833129..10833219

Genome Context

<gbrowseImage1> name=IndicaChromosome01:10826611..10833219 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:10826611..10833219 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGGCTCCGATGCGGACATGGAGGATTACGGGTTCGAGTACTCCGACGACGAGCCGGAGGAGCAGGATGTTGACATCGAGAACCAGTACTACAACTCCAAAGGTATGGTTGAGACAGACCCTGAGGGTGCACTTGCTGGCTTCGATCAAGTAGTACGTATGGAGCCTGAAAAGGCTGAATGGGGTTTCAAAGCTCTGAAACAAACAGTGAAGCTGTATTATAAGCTTGGGAAGTACAAAGAAATGATGGATGCCTATAGGGAGATGTTGACATACATCAAATCTGCTGTGACACGTAACTACAGTGAGAAATGTATAAACAACATTATGGATTTTGTCTCCGGATCAGCTAGTCAAAACTTCTCTCTTCTGCAAGAGTTCTACCAGACAACACTGAAAGCACTTGAAGAGGCAAAGAATGAGAGATTATGGTTTAAGACAAACCTGAAGCTTTGCAAAATTTGGTTTGACATGGGGGAGTATGGCCGGATGAGCAAGATACTGAAGGAGCTGCATAAATCTTGTCAAAGAGAAGATGGTTCTGATGATCAGAAGAAAGGCACACAACTTTTGGAAGTCTATGCTATTGAGATCCAAATGTACACTGAAACAAAGAACAACAAAAAATTGAAGGAACTATATACAAAAGCTCTTTCCATCAAATCAGCGATACCTCATCCAAGAATCATGGGTATAATTCGTGAATGTGGTGGAAAGATGCACATGGCTGAGAGGCAATGGGCAGATGCTGCAACTGATTTCTTTGAAGCATTCAAAAACTATGATGAAGCTGGCAATCCGCGGAGAATTCAATGCCTGAAATATCTTGTTCTTGCAAATATGTTGATGGAATCTGAAGTGAATCCCTTCGATGGGCAAGAGGCTAAGCCGTACAAAAATGATCCTGAGATCCTCGCCATGACAAACTTGATTGCAGCATATCAGAAGAATGACATCATGGAATTTGAAAAGATTCTAAAGAGCAACAGAAGAACAATAATGGACGACCCTTTCATCCGTAATTATATTGAGGACCTATTGAAGAACATCAGAACTCAAGTTCTGCTCAAGCTTATTAAGCCATATACTAGAATCAGGATTCCATTCATTTCACAGGAGCTAAATTTCCCAGAAAAGGATGTCGAGCAGCTCTTGGTCTCACTCATTCTGGATAACCGAATCCAGGGCCACATAGATCAGGTGAACAAGTTACTAGAACGTGGTGACAGGTCGAAGGGAATGAGGAAATACCAAGCCATAGACAAGTGGAATACTCAGCTGAAGAACATCTACCAAACGGTGTCCAACAGAGTTGGGTGA</cdnaseq>

Protein Sequence

<aaseq>MGSDADMEDYGFEYSDDEPEEQDVDIENQYYNSKGMVETDPEGALAGFDQVVRMEPEKAEWGFKALKQTVKLYYKLGKYKEMMDAYREMLTYIKSAVTRNYSEKCINNIMDFVSGSASQNFSLLQEFYQTTLKALEEAKNERLWFKTNLKLCKIWFDMGEYGRMSKILKELHKSCQREDGSDDQKKGTQLLEVYAIEIQMYTETKNNKKLKELYTKALSIKSAIPHPRIMGIIRECGGKMHMAERQWADAATDFFEAFKNYDEAGNPRRIQCLKYLVLANMLMESEVNPFDGQEAKPYKNDPEILAMTNLIAAYQKNDIMEFEKILKSNRRTIMDDPFIRNYIEDLLKNIRTQVLLKLIKPYTRIRIPFISQELNFPEKDVEQLLVSLILDNRIQGHIDQVNKLLERGDRSKGMRKYQAIDKWNTQLKNIYQTVSNRVG</aaseq>

Gene Sequence

<dnaseqindica>1..10#99..191#2569..2647#3969..4209#4292..4366#4458..4592#5133..5320#5414..5482#5559..5649#5761..5895#6322..6434#6519..6609#ATGGGCTCCGGTAATCCCCGATGTCCCGATTCGCGCCCTCGCTCGATTGTCGTTTCCGCACCCCCTTCTCTCATCCCCGTGATCGGTTCCTTTTCCAGATGCGGACATGGAGGATTACGGGTTCGAGTACTCCGACGACGAGCCGGAGGAGCAGGATGTTGACATCGAGAACCAGTACTACAACTCCAAAGGTTCGCTTCCAATCTCTTTCATTCTTGTGTTTCCTCGGCGGTGCGTTTTCTCGGACCCTGTGTATGTAGTGTGGTAGTGTAGTATTCGAGGAGAGGCCACCATGATTGTGTACCAGCCAAATCCCTGATTTTTAGCTGTTCTCTTAGGGTTCCCTTCTATGATGCATGTATGTATGTTGCTTTGCTTTTGCGTGAAATTGCCGGTTTAACTGTGACTTTGTTGATGGGCATGTATGTATATTTTTCTTGAATTTCTTAGGACGTTTTTTTTTAAACCTGACCATGAATATCCTACACCATCAGAATCTTAATAAAGTGAAAGTACTACTTGCTTATTTCCACCGACTGTGTGGTTAGTCCTATTGTGTCCCTTGTAATTAAGAACTAACATTTTGGTTCTGCGAAAAAAAAACACTTCCCAACTAAAAAGGGACATTTAGTTTGTATGAAAACTGAATACCTGATAGTTGTTGCTTCATGAGCTTATAAATCATGCCACTATTAAAATACAAAGACTTAGTTGGGCATGTGCATTGTTTTCTTTGAATACATCTGATTGAACTGCCTTTACCTTTCTGTGTATGGAACATTTGGAAAGATTTTTTTTTAATGATTCACTTTCTACTTTTATGAAAGATAATCTTCACTGCTATAATTTTACATGACTAAATTAATTTGAGGATCGATAATTTCTTGGAATTCATCATTTGCTTCTAAAGATTAACGTAGAAATTTCTAGCCTTATAAAGGAGGTTAAATTAATGCCACCAGTTGTTATAAACATAAGGGCTTTACAAATTTGTGCACATAATCTTAACAGGCGGACTACTAATTATGCAGTGTCTTTCCTCAAAAAAAAAAAGAAGGAAAAAAGCCGACATGTTTGTACAAACCCAATCATGGTTGTTGTGGCATCGCCTAGACAATGCCCTTTTCTTGATCTGGCCTTTTCTTCACTCCGGTAGTTAAGAACCTAGGTCCAGAGTCTGGCCTGCACATCTTACCGATGCCTATACAGTGCCAGTTAGGTGGTGCACCCATCTTTTGGATCAGGAAAGGGAAAAACTGAAGAGGAGGCCCAAGGACTAGTTCTCGCAACATTGAAGAGTCACACTATGTTCCAATTTACCAATACGGAAAATAGAGTTTCTCTAGTAATTGCGCTCTTAGACAACTACCATTTGGATAGGCAGGGACAATTAATCCATAGTTACGTGAATAATGGAATGCATGGGGATCCAAAAAAGGAAAACAAAAATTTCTATGATATCCTTCTTTTCCATGGATATGTATTAAGTGCAATAGTGATGATTCATTCTTGTAAAGTAGTGTATCTGAGATGGCAATTGGGATCTATAATAGAGGGCTGCCTATGCCCAAAACCGATGATTCACTTACCTTACTCCATGAGTGCCCCTTCTTTTTTAGAAAGACGAGTCTCACTTATCAAAAGTCATAGCAGTGGCATCTAGGAGAGTAGGAGGCCTGAGGAGGATGCTGGCAGAGGCTTACCTTGCCTTGGCCATATATGTGGTCATCCAGGATATGCTAGCTGTCCATGGCGAGCATCTGGGTGGGGTCAGCTGGCAGTGTCACGTGACTGTGTGAGGGAGGGGGCATTAACGAGTGTGCATGGCCTATGGTGGAGTAGGTATAGAGAAAAGAAGGTTAAGAGAAGGAATAACCGAAGAAGGGAAGGTGTGGTGTACTGGTGTTGTTGGCGCAGCAATGCAGTCACTGTCTCCAATTATCCATTGCTGCTTCTCATTTGCTCTGCTAACCTGCTAAGCTTGATTTTCTTCTTTCTGCTCAGCTTTGCTCATGTATTCTCCTCTACTAAAGCTCACCTTACCTTGCATTGGGGATGCCAAGGTGGCCGCTTGGACGCCATTGCATCCTCAAGTGCTGTGGCTGTCGGTTTGTCCCATGACGACCTTGGAATCAAATTGATCACAAATAGTGTTATCTGGCAGAAAAAAAAATACTCCCTCTATTGATTTTTATTAGGCATATGCCCGCTTTTGAGAAGTAAAATTTCGTAGATTTTGGTCAACAATTAGTCAAAATATTTTTAAAAAGTTAGTTTTATGGCTATTATGATTATATTTTATTATGTGAAATGAATAGTCAAAGTTTAATCTTGAAGTTTTTTTTTTTCAAAATAAAATATGCCCTAAAAAGCCAACAGAGGTAGATGAATTATGGCTACTCCTATTTCTTGTTTCTGAAATGGAAAGCTAGTTCATATGGTCTGTGAGGTGGGAGCATGGGGATTCTTGCATAAATTGTGTTTGTCTTTTGTTACCACACAATTACAAATGCTACTTCATGTATATGCTGCTTTATGATATGACATTGCTCAAATATCTTATTACAGGTATGGTTGAGACAGACCCTGAGGGTGCACTTGCTGGCTTCGATCAAGTAGTACGTATGGAGCCTGAAAAGGCTGAATGGTAAGCCTTATATAACATTTTACTAGTTGATACCCTGCTGAAATATCTTATTACGCATGTGGTAAGGAAGGTGTCATTTTGAACAAATTCTATGGTTGCAAAATGAAATAAAATATATAATTGAAAACATTCTTCTGGTGATGCCGTATTTTTAACTTTCACATTTAATATTTCATTCTTGAACGTCTGTATGCATCCTATTGGTTAGACATTAAAACCTTGCCTTCTGTGCGGTTCACAAAAGATGTTGGATTTTATTGTCTTGTGGGCTTGCCTAAAGTGTTGGGCTCAGCAGAATGAATCAAACACCCGAGGACCTTTAGTACCGTACCAAACCAGCAGCCTTCGCGCCAAGCGACGACCGCCCTTGTCCCTTTCCTTTTTCCATTCTGCCTACTTCTTAGCTTTGTTCCGTCAGTCTAAGGCAAAGCTTAAGTGGTTCGCCTACCTATCCATCTGTGCCACTGAGTACTCATTCAAAGGTAGAGAATAAGAGGGGTGATATGGCTTTCACCATGTAAGATAGATTTAGTAAGAACTACATTTACTGGGGATCAATTGTATCTATAATGATGTCGATTTTAGTTGCTGTATAGGTCCATCTACAATATAAAGTTCCTGGACATATGAACTCTAAATTCTATTGGCATTCGACTGTCAACATGCCCATATGAGCTACTTGTTATCGTTAAGCTTCAGGGACTCTGTACCTTCATGTACTTGTATGTTTTTTATGGTAGCACAGTGCCTGTATGCTGTTAAGACTTTCAATTAGATATAGTCTGTATTCTGATCCTACAAATGCCAAGATAATTGCCCTAAAAATTTAAAAATAAATAAGGTTGCATGAACCGGTCTTTTATATATTTGAATGAATGTGTGCATGGTGCAGTATTAGAAAAAAATTACAAACAACAAATTCTTGTTTACGTAGATCCATCCACAGAAGATTAACAATTTAAGATATAACATGACATCACTAGCACCTACTCTTTGTGCAGTAAAGATGTATGAAAATTGTTTATCACAAACCATCAGCTCGAGCCTTCTCAAAGTTCAGACCTAAGATCTTAAAACCTCAGGTCATATTATGTTGACCAGGAATCCCCCCAGATTCCCAATATAGGATATGCTTGAGCCACAAATAGAATTCTAACTGAAGTATTAGTGGCCTTTTTGGAGGGCTGCATATTTTGATGGACATCCTTTTTTTTCAATGGTAATGTGTTATAAGTTGTCAGTGAAATCAAGTGTATCTGTATCCAACAGCCACTCATATTTTAGAGATCTGACGTCAGTTCTGTAACTCTTTTCTTTATAGGGGTTTCAAAGCTCTGAAACAAACAGTGAAGCTGTATTATAAGCTTGGGAAGTACAAAGAAATGATGGATGCCTATAGGGAGATGTTGACATACATCAAATCTGCTGTGACACGTAACTACAGTGAGAAATGTATAAACAACATTATGGATTTTGTCTCCGGATCAGCTAGTCAAAACTTCTCTCTTCTGCAAGAGTTCTACCAGACAACACTGAAAGCACTTGAAGAGGCAAAGAATGAGGTTCAGTTTCTTGCCTTATCCAAATTAGAATTTTATGTACCAAAAGATTGTTCTTTATACCTTGCTATTCTTTGCTGCGCAGAGATTATGGTTTAAGACAAACCTGAAGCTTTGCAAAATTTGGTTTGACATGGGGGAGTATGGCCGGATGAGCAAGGTGCTTATACAAGTTTCTCTAGTCAATTGGTTTTCTTTACATATTCTGCAGTCATTACTCTAATTATTTTGCTCGTAACTTCTTCCTGTAGATACTGAAGGAGCTGCATAAATCTTGTCAAAGAGAAGATGGTTCTGATGATCAGAAGAAAGGCACACAACTTTTGGAAGTCTATGCTATTGAGATCCAAATGTACACTGAAACAAAGAACAACAAAAAATTGAAGGTAAGACATATTTGTCAGTCTTTTTACACGTGATTATTTTGGATTACAGGTTACTACTGTTCAAGATTTTGTGTCAGTTTCTTGTTCAATATTGCAGTACTCTAGCTGTATATTTGTTAAAAAACACAGTTGACTGCAGCCAGAACGCAGATATAAAGATAACTTTTCATCCTTCTGCTGTTTTGCCGGTTTATTCCTTTGACAATAATTTGTATAGGTTGATATGTTACTGATACCAGGATATTTGCCACTGAGTATACAATTATACATTTGCATAATATGCTTGCCTGAAATCAGGTGGTATAGTGAGCACACAACTTCCTTGCTAAATTATTGATTTTCTACAGCTTTATAAAATAAAACCTACAAAGCTGATGCCTGTCTTTTGTACCTATTTTGGACAATATGTTTATAAGAGCATTGACTATATTTAGCCTATTTCATTTATAGTACTATGTTGACCCATATTGGGTTCAAACCTTTCTCCTGCCTTAGGCAGTTAGCATGAAATGCACTTTCTGAAGTGAACCTCTGCTGCAGGAACTATATACAAAAGCTCTTTCCATCAAATCAGCGATACCTCATCCAAGAATCATGGGTATAATTCGTGAATGTGGTGGAAAGATGCACATGGCTGAGAGGCAATGGGCAGATGCTGCAACTGATTTCTTTGAAGCATTCAAAAACTATGATGAAGCTGGCAATCCGCGGAGAATTCAATGCCTGAAGTAATCAAATCATCTGCATTTCTTTTCCATGTTAATTTCGTATATTGATAAATTTAGAACTTCCTCATCCTTTTTTATTGTACTGCATATTAGATATCTTGTTCTTGCAAATATGTTGATGGAATCTGAAGTGAATCCCTTCGATGGGCAAGAGGCTAAGCCGTAAGACATTTGATGATTCCCTCATAAATCTTGTATCTTAATTTCATGCCACCCTGTAACTCCTTGATGCTTTCAGGTACAAAAATGATCCTGAGATCCTCGCCATGACAAACTTGATTGCAGCATATCAGAAGAATGACATCATGGAATTTGAAAAGATTCTAAAGGTCAGTGTTATTGAACATTATCCATCTTGCTATTTTCTGCAGCAATTCTAAGCTAGTTATTCTGTTAATTGATTCTGGATTTCTGATGTGATTGTTACAAACAAAATTCAGAGCAACAGAAGAACAATAATGGACGACCCTTTCATCCGTAATTATATTGAGGACCTATTGAAGAACATCAGAACTCAAGTTCTGCTCAAGCTTATTAAGCCATATACTAGAATCAGGATTCCATTCATTTCACAGGTGAATACTCACTCTCTTAAATGTTCATGATAATCTGTGCTGACAGAAATTGATGTGAGCTAAAGATTTGTATTTTGTCTAGATAATCTGTTCTTTGTCCAACACCAGATAATGTGCATTTGCTCAATACCAGAAGAATATGACAATATCTTGTGATAACAAATGGTGCATGAAAATTATTAGTAACATGGAACTTTGGTATATACTCGTGCTATTTTAGGAAGTTGCAAGAAATATAGTTTGAAGCTTGATCTTTTTCTGTCGTGTGCCCAAACTAGGTGATTCCAGTTCAATTGAAATCATGTGCGCTTAATCGTGCAGACCCTATGCTGTTCCTCACGGAGGTCTAGTTTTTTGTGAAATTTGCTTTCGTACAGTGTACAAGATGCCTTGTCATCGATTGTTCTGTCAATGTTTTGCATGTAGGAGCTAAATTTCCCAGAAAAGGATGTCGAGCAGCTCTTGGTCTCACTCATTCTGGATAACCGAATCCAGGGCCACATAGATCAGGTGAACAAGTTACTAGAACGTGGTGACAGGTGCGTATTCCCCCTGCTTTTTCCATCACATTGTTCTATCTATGCGATTGCTTTTCTGAAGGTGATCCGATTCGCATTTCGCAGGTCGAAGGGAATGAGGAAATACCAAGCCATAGACAAGTGGAATACTCAGCTGAAGAACATCTACCAAACGGTGTCCAACAGAGTTGGGTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA003261

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA003261&oldid=40985"