BGIOSGA003395

From RiceWiki
Revision as of 10:50, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA003395| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA003395, complete gene.| tag = B1135C0...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA003395

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA003395, complete gene.

LocusTag

B1135C02.24-1

Ensembl Transcript ID

BGIOSGA003395-TA

Ensembl Protein ID

BGIOSGA003395-PA

Length

3958

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:13768893..13772850

Sequence Coding Region

13768893..13769129,13771921..13772355,13772449..13772850

Genome Context

<gbrowseImage1> name=IndicaChromosome01:13768893..13772850 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:13768893..13772850 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCTCCGAGAGGCAGCTACTGCAGGCGGGTGATGGGCGTGGCCGTCGCCGTGGCGGCTTGCGCGCTGTGCCTCCTGCCGGCGACGACCAGCGGCGCGCTCCGCGTCGGGTTCTACCAGAGCAGCTGCCCCAACGCCGAGGCGCTCGTCCGCCAGGCCGTCGCCGCGGCCTTCGCCAGGGACGCCGGCGTCGCCGCCGGCCTCATCCGCCTCCACTTCCACGACTGCTTCGTCAGGGGGTGTGATGCATCCGTCCTCCTGACCAAGAACCCCGCCGGTGGCCAGACGGAGCGCGACGCGGCGCCGAACAACCCGAGCCTCCGGGGCTTCGAGGTGATCGACGCCGCCAAGGCCGCCGTCGAGGCGGCCTGCCCGCGCACCGTCTCCTGCGCCGACATCATCGCGTTCGCCGCCCGCGACAGCGTCAAGCTAACCGGCAACGTCGACTACCAGGTCCCCGCCGGCCGCCGCGACGGCAGCGTGTCCAACGGCAACGAGGCCCTCCACAACCTGCCCCCGCCCAACGCCACGGCGCAGCAGCTCGCCGACACGTTCTTCGCCAACAAGTTCCTCACCCTCGAAGACATGGTCGTCCTCTCCGGCGCCCACACCGTCGGCCGCTCCTTCTGCGCCTCCTTCTTCAACCGCGTCTGGAACGGCAACACCCCCATAGTGGACGCCGGGCTGGACCCGGCGTACGCGGCGCAGCTGCGGGCGCTGTGCCCCACAAGGGACACGCTGGCGACGACGCCGATGGACCCGGACACGCCGGCGACGCTGGACAACAACTACTACAAGCTGCTGCCGCAGGGGAAGGGGCTCTTCTTCTCCGACAACCAGCTGCGGGTGAACGCCACCATGAACGCGCTGGTGACCCGGTTCGCGGCGAACGAGGCGGAGTGGAAGCAGCGGTTCGCCGACGCCATGGTGAAGATGGGCCACATCGAGGTGCAGACCGGGCGGTGCGGCCAGATCAGGGTCAACTGCAACGTCGTCAACCCGTCGACCTCCTCGCCGGAGGTCGAGCTGGCCGGCGAGGATCAGGAGACCGGAGGCGCCGTCGCGGCAAGCTAG</cdnaseq>

Protein Sequence

<aaseq>MAPRGSYCRRVMGVAVAVAACALCLLPATTSGALRVGFYQSSCPNAEALVRQAVAAAFARDAGVAAGLIRLHFHDCFVRGCDASVLLTKNPAGGQTERDAAPNNPSLRGFEVIDAAKAAVEAACPRTVSCADIIAFAARDSVKLTGNVDYQVPAGRRDGSVSNGNEALHNLPPPNATAQQLADTFFANKFLTLEDMVVLSGAHTVGRSFCASFFNRVWNGNTPIVDAGLDPAYAAQLRALCPTRDTLATTPMDPDTPATLDNNYYKLLPQGKGLFFSDNQLRVNATMNALVTRFAANEAEWKQRFADAMVKMGHIEVQTGRCGQIRVNCNVVNPSTSSPEVELAGEDQETGGAVAAS</aaseq>

Gene Sequence

<dnaseqindica>1..237#3029..3463#3557..3958#ATGGCTCCGAGAGGCAGCTACTGCAGGCGGGTGATGGGCGTGGCCGTCGCCGTGGCGGCTTGCGCGCTGTGCCTCCTGCCGGCGACGACCAGCGGCGCGCTCCGCGTCGGGTTCTACCAGAGCAGCTGCCCCAACGCCGAGGCGCTCGTCCGCCAGGCCGTCGCCGCGGCCTTCGCCAGGGACGCCGGCGTCGCCGCCGGCCTCATCCGCCTCCACTTCCACGACTGCTTCGTCAGGGTACCTACTACTGAAACCCAGCTAGTGCATATAGTAGTATAATGCAGAAATTATTGACCACCATCTCCATGAATATCTGTTTGTATAATGTTTATAGAAGCACATGCATATACGTATATGCCTGCAAAATGTCTGGCTTGCAAACGGGAAATAATCGACTTATGTTTGATGTGCTTAACTTTTTTCTTAAGACAATGTTTAACTAAACACTTGAGAACAGCTAGCCCAGATTTTCCCAGTTGGGGAACCAAAATAAAACACTTATTTTGTTAATGATGATTAGTTTATCTACTTTTCACAAATTAATCCTGAAGATTTGAATTTTCTAATATGTTGGCGATCTGCATATTTGCCACATTATTAGAAACTGGATCGAGTAAACATCTACCCAACTAAACTTATTCAGGTCTATGCTCCATCTATGCATAGCTCATACAAATACTTAAATTGGAAAAGAACTCAACAATTTTTCAAAATAGTTCTTTGCAAGTTAGTTTCCATGAATCCTTACATGTGTGAGGATCAATATATGCACGGTGAAAATGGACTTGTAGGGGGCTTTTGACATCTCTCTCTAAATCTGTAATTGTCGTTTGTGTTGCTTTTCAATTAGTTTTACTAATTAATATCATGTCTGCCTTGGGCCTTGGCTAGCTTATTTTTATGCTTCTCCGTTGCTAACTTGAGCTTAATTACCTCTTTTCAACCATGCATCCCTCAAGCGATCTACCAGCAGTATTGATTTTTTTCATTTACTTTTCGTCCCCAGAATGCATGAATTAAGCTATTAATTTAAGACTAAGACCACCAGCAAATATTCAAGTACTAGTATTTAGATTTTCCATAGAAAAGATATATTTGTCATCACACCAAATTAAATTAAGAACTACACGCAAAAAAAAAGAACTTTGATTCCATTGTATATTTAACAAAATCTATCGATATACTTTTGAAAAAGATAATGCTCAAACATGTGTCTAAAAATGAAGACATTAAAGAACAATTAAAGAGACCCTGGTCATGCTTAATGAAAACCAAAAAAAGGTAGAGTTGTCTCTGAAGACAAAGGGAACAAAGTTAAAAGCCATAAAAGAAAAGCTACCAAAATCAGAAAGCATAAGTGTATATAGTTACAGAATCAAAGCAGCTTTCTTTCTTTCAAGGGAACCGCATATACCCTGCTTGCAATGGGTGACAAACAAAAAGCCTCCCAGGCTCCCATTTGGCGAATCTCAGTATGTTCCTTTCGTTTCCTCAATCCCCATTGATCCTTCATTTTTTCAGGTGTCGTATTAACATCCAGTACTGCTTGACACTGGCAGTCGTAAATATGTACTCCTTAGTTTGATAGTATCAAAAATGGTATTTAACTCGTTGAATATCATATTTTGATGGAACAATAAGGTGTGATTTAGTTCAAGTCTTCAAGAGTATAATAAGGATGTGTTCGTTTGGCGACAGGAATGCTCCCTCTCGGCACACAAAATAGAGCGGCGAAATAGCGCATGATTAATTAAATATTTACATAAACAAACTTAAAAAATAAATTAATATGATTTTTAAGCAACTTTTCTATAGAGAAAAGTTTTTGCGAAAACCGTTGAGCAGTTTAGAAAGTAGAAAGTATATGCACCGAAAATGAGGAGACAGAAGAAGTTGAGAAAATGTGGTATAGACTACAACTTAAGATGTACTTTAGTCTATGTAGAGCTAGGCAACATATATATGACACAATAGGAGGTTAATGGCCGGAGTTTACAGCACGTGTATGTAGAGGAGTAATGTAGTTGACTATGTCACTAGGAGGTGGAAGAAGGGACGTGACATTGGATCTAACGATGCGAAACATGGACGGAGTCACAAATCAGGTTGGAGGAGCTTCTCGCTGAAACCAGAAATAAGCTAGGAGGTGGAGGAAGGGGTTGGTATGTTGTCCTTAATAAGAGCTAAAATCGATTGATTATTTGTTTTTTACAGCTATTTAAGGTTATAAACAAATAAATTAGCTATTAAAAAGTTGGAAAAATATTTTATAAATTTTCTAGTAGAAGATCGAGTAGGATAGAGGTGAAATGAATCTTCTAGTAATAATGCCTCAAAAAATTCTAGTCGACCTCACACAATAAAACAATAAGCATGTTAGTTAAACTGAGCATTACTAAAAACATATTAATTTGTTTGTTTGGATTACAATAAAGACGTAGACATGTACACATAGCTATATTAGTTAAACCGGGTGTCATCAATTTACCTGTTGATTTGAATATATAGTTGTAAGCTTCTTCAGTACTCCCTTCATTCCATAATATGTACTCCCTTCATTCTATAATATAAGAGTCAAACTTGGCACAGTCTATAATTTCTCATATACTATAAGGTTTAAACAAAATTATAACCATCTTAAAGTAAATTTAAATGTCAATCTAATGATATTAATTTTAGCAAATGAAATTTAATTTATATTATAATAATTGTTGGTCAAATGTTTTTATTTATGAATTTTGGAATATGTGCACACCTTATATTATGGGATAGATGGATTATATTTTTTAAAATACTTCAGTAATCAGTCAGTGCTAGAATTTACACAAGCATGTACTATCTACATACTCTCTCCGTCCCATAAAAAATTAACCTAATATTGGATGTGACACATCCTAATACAATGAATCTAGACATTGTACTAGATTCACTTTTTTCTGGGACGGATGGAGTACAAGATGAAACATTTTGAGTTACCTTTTTTTTTTCTTTTTTCTGAAAGAAATTCCTTCCTGTTACTGCAATGCAGGGGTGTGATGCATCCGTCCTCCTGACCAAGAACCCCGCCGGTGGCCAGACGGAGCGCGACGCGGCGCCGAACAACCCGAGCCTCCGGGGCTTCGAGGTGATCGACGCCGCCAAGGCCGCCGTCGAGGCGGCCTGCCCGCGCACCGTCTCCTGCGCCGACATCATCGCGTTCGCCGCCCGCGACAGCGTCAAGCTAACCGGCAACGTCGACTACCAGGTCCCCGCCGGCCGCCGCGACGGCAGCGTGTCCAACGGCAACGAGGCCCTCCACAACCTGCCCCCGCCCAACGCCACGGCGCAGCAGCTCGCCGACACGTTCTTCGCCAACAAGTTCCTCACCCTCGAAGACATGGTCGTCCTCTCCGGCGCCCACACCGTCGGCCGCTCCTTCTGCGCCTCCTTCTTCAACCGCGTCTGGAACGGCAACACCCCCATAGTACGTCGCCTCGCCGCGCCGCCGTCGTCCATGGCGCCCCCCATGCTTTTTCGCAGTTACGCGGTGTGACGGTGCGTGCGCGTGTGTGTGCAGGTGGACGCCGGGCTGGACCCGGCGTACGCGGCGCAGCTGCGGGCGCTGTGCCCCACAAGGGACACGCTGGCGACGACGCCGATGGACCCGGACACGCCGGCGACGCTGGACAACAACTACTACAAGCTGCTGCCGCAGGGGAAGGGGCTCTTCTTCTCCGACAACCAGCTGCGGGTGAACGCCACCATGAACGCGCTGGTGACCCGGTTCGCGGCGAACGAGGCGGAGTGGAAGCAGCGGTTCGCCGACGCCATGGTGAAGATGGGCCACATCGAGGTGCAGACCGGGCGGTGCGGCCAGATCAGGGTCAACTGCAACGTCGTCAACCCGTCGACCTCCTCGCCGGAGGTCGAGCTGGCCGGCGAGGATCAGGAGACCGGAGGCGCCGTCGCGGCAAGCTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA003395