BGIOSGA003448

From RiceWiki
Revision as of 10:51, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA003448| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA003448, complete gene.| tag = B1045F0...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA003448

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA003448, complete gene.

LocusTag

B1045F02.6

Ensembl Transcript ID

BGIOSGA003448-TA

Ensembl Protein ID

BGIOSGA003448-PA

Length

2887

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:14977384..14980270

Sequence Coding Region

14977384..14978209,14978863..14979023,14979175..14979308,14979733..14980042,14980217..14980270

Genome Context

<gbrowseImage1> name=IndicaChromosome01:14977384..14980270 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:14977384..14980270 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGCTCAACCTCCTCCTCCTCCTCGTGCTAGCCACCACCTCATGGTCACCGGCGGCGAGCGGCCAGGACACCTCCTCCGCCACGGTGAGCCCGCTGAACACGCACTGCAACGCGACCGCCGGCAACCACACGGCCGTGGGCAGCGCGTACCTCTCCAACCTGCGCGCCCTCGGAGGCGCGCTCTCCAGGCGCGCCCTCGCCACCGGCTTCGCGTCGGGGAGCTACGGCGCGGCGCCCGACGAGGTGCACGGCCTGGTGCTCTGCCGGGGCGACTTCACCGGCGGCAACTGCACCGACGGCCTCGCGTCGGCGTTCCGCGACGCCGCGGCGCAGTTCTGCCCGGGCGCCGCGGACGCCACCGTCTACTACGACCAGTACATGATCCGCTACACCAACGACGGCCGCCTCCTCTCCGACCCCGGCGACAACGAGCCGCTCTGGTCGGGCAAGAACATGAACGAGGTCGCCGGTGCCGACGCGGCGGCGCGGTTCATGGCGAAGGCCACGGAGCTGATGAACAGGACGGCCGACCTCGCCGCCTTCGGGTCGTCGTCGTCGCCGAGCCGGTACGCCACGGGGGAGACGTGGTTCGACGAGCAGGGGGTGAGCGTGGTGTACGGGCTGGTGCAGTGCACGCCGGACCTCACCGGCGAGCAGTGCCGGAGCTGCCTCGCCGGCATCATCGCGCAGATGCCGAAGCTGTTCGGCGACGCTTCGTCACGGCCGGTCGGTGGGAGGATCCTCGGAGTCCGGTGTAACCTCCGTTACGAGAAGGATGTCTTCTTCAAGGAGACCAGCACCACTATCAAGCTCAACATGCCCAAAAAGTTATTGTTGCAGAGGGATCTAGTCATATTGGAAAGGGAAATCGTGAGTGAAAGCGATGAAAGATTTTCACTGTTCAAGTTTTCTAAGATAAAAGATGCCACGGACAATTTCTCCAGGGAAAATAAGCTAGGAGAAGGTGGATTTGGTCATGTTTACAAGGGCCGTTTGACTACGAACCAAGACATTGCAGTGAAAAGACTTGCCCCAAATTCTGCACAGGGATTCAAGGAGTTCAAAAACGAAATTAAACTCATAGCATGCCTTCAGCATAGGAATCTTGTTAGGCTCCTTGGCGGGACCCATATGTCAGCCTTCTACATCACTTTCTTCCTCATTATCCTGCTCCCCCTCTTCCCCAAGCCCTTTTTGCTTGCGGCAGTGGTGCCCGCCCGCGGCGACGGCGGGGCAGCGGTGGCAGCGCGTGGCGACGGTGGGGCGGTGGTGGCCGCGCGCGGCGACGATGGGGCGGCGGTGCTCGTGCCCGACGACGACGGGGCGACGGTGGCCGGGTGCGACGACGACGGAGCGTTCCTCCTAATGGCGACCCTACTACTTATTGCTCGTCTCCCCACTCGGCACCCCCCATCTCTCTTTGTGCCAAAGATCCTACAAACTCGCCTCGCGAATAACGATGGCATCGTCGCTGCCGTCGTCTGA</cdnaseq>

Protein Sequence

<aaseq>MLNLLLLLVLATTSWSPAASGQDTSSATVSPLNTHCNATAGNHTAVGSAYLSNLRALGGALSRRALATGFASGSYGAAPDEVHGLVLCRGDFTGGNCTDGLASAFRDAAAQFCPGAADATVYYDQYMIRYTNDGRLLSDPGDNEPLWSGKNMNEVAGADAAARFMAKATELMNRTADLAAFGSSSSPSRYATGETWFDEQGVSVVYGLVQCTPDLTGEQCRSCLAGIIAQMPKLFGDASSRPVGGRILGVRCNLRYEKDVFFKETSTTIKLNMPKKLLLQRDLVILEREIVSESDERFSLFKFSKIKDATDNFSRENKLGEGGFGHVYKGRLTTNQDIAVKRLAPNSAQGFKEFKNEIKLIACLQHRNLVRLLGGTHMSAFYITFFLIILLPLFPKPFLLAAVVPARGDGGAAVAARGDGGAVVAARGDDGAAVLVPDDDGATVAGCDDDGAFLLMATLLLIARLPTRHPPSLFVPKILQTRLANNDGIVAAVV</aaseq>

Gene Sequence

<dnaseqindica>1..826#1480..1640#1792..1925#2350..2659#2834..2887#ATGCTCAACCTCCTCCTCCTCCTCGTGCTAGCCACCACCTCATGGTCACCGGCGGCGAGCGGCCAGGACACCTCCTCCGCCACGGTGAGCCCGCTGAACACGCACTGCAACGCGACCGCCGGCAACCACACGGCCGTGGGCAGCGCGTACCTCTCCAACCTGCGCGCCCTCGGAGGCGCGCTCTCCAGGCGCGCCCTCGCCACCGGCTTCGCGTCGGGGAGCTACGGCGCGGCGCCCGACGAGGTGCACGGCCTGGTGCTCTGCCGGGGCGACTTCACCGGCGGCAACTGCACCGACGGCCTCGCGTCGGCGTTCCGCGACGCCGCGGCGCAGTTCTGCCCGGGCGCCGCGGACGCCACCGTCTACTACGACCAGTACATGATCCGCTACACCAACGACGGCCGCCTCCTCTCCGACCCCGGCGACAACGAGCCGCTCTGGTCGGGCAAGAACATGAACGAGGTCGCCGGTGCCGACGCGGCGGCGCGGTTCATGGCGAAGGCCACGGAGCTGATGAACAGGACGGCCGACCTCGCCGCCTTCGGGTCGTCGTCGTCGCCGAGCCGGTACGCCACGGGGGAGACGTGGTTCGACGAGCAGGGGGTGAGCGTGGTGTACGGGCTGGTGCAGTGCACGCCGGACCTCACCGGCGAGCAGTGCCGGAGCTGCCTCGCCGGCATCATCGCGCAGATGCCGAAGCTGTTCGGCGACGCTTCGTCACGGCCGGTCGGTGGGAGGATCCTCGGAGTCCGGTGTAACCTCCGTTACGAGAAGGATGTCTTCTTCAAGGAGACCAGCACCACTATCAAGCTCAACATGCCCAAAAGTATGTCGTCTTCTCGTTGATTTCAATTCATATATGCACTAGCTCCTTGCATGAGCATGTCCTTGCAAGATTAACTACAGCAATTTAATCATATTTTCAGACAACCATGCATACATAATTGCATATATATCACCTGATTAATGTATGTAATCTAATCCAATATATCTATAAAATTCGTCCCTACTAAATTTTAAGTGTTGTTAATATTATTTATCTCTTCTCTAATTAAATTAAGTCACATCATCTCAATTCATAGCTCTTGAATGATTAACTTATGGTCTAAATTATCTTTCTCATTTTCTTCTCTTATAAAGTCATATCATATTTGTTTGCACACTTATCTCTTTTTCATCTAGCTAGTATCTTTTAATTGCACACTTACTTGCATCTAGAGGGACTGAGCACGATGCTGAAGATCGTCATATTTGGCGTGCCGTGCTTGGTACTGATCATATCCGTGGTGCTGCTCAGGCCTTACATCGTCAAGGAGATAAGAGGCGAGTTAACTAAAATTTCTTTGACTGTTGACCGATATGTTGTTTTCTTGCTCTCTAGTTAATATATATATATACACAAGATTATGGTCAATACTGTATTCTTCATTGTCACTTCATATTGATTTTTGCTTACAATTTGATCTGTGGCAACGACAGAGTTATTGTTGCAGAGGGATCTAGTCATATTGGAAAGGGAAATCGTGAGTGAAAGCGATGAAAGATTTTCACTGTTCAAGTTTTCTAAGATAAAAGATGCCACGGACAATTTCTCCAGGGAAAATAAGCTAGGAGAAGGTGGATTTGGTCATGTTTACAAGGTAAATGCGTATTCTCTAAATATAGTATAAGTACTTCTGTTCCAAAATATAACGGATTTTAGTTATGCATTTAGAGTCTGGACAAATAATTGATCACCAATAATCCTCTAACATGCAACTATATAAATATATATCTATGTTTCATCATCAGGGCCGTTTGACTACGAACCAAGACATTGCAGTGAAAAGACTTGCCCCAAATTCTGCACAGGGATTCAAGGAGTTCAAAAACGAAATTAAACTCATAGCATGCCTTCAGCATAGGAATCTTGTTAGGCTCCTTGGGTGCTGCATCAAAAGCAAGGAGAGGATATTAGTCTATGAATATATGCCTAATGGAAGCTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTTGTGTTCGCCACCTGTGGAACTAAACTGATTGCAGATTAATTTCCCATGCTCTTGGCTAATTTGTACAGATTGAAAATCAAACTGCTTTGCTGTATTTTCCAACTAGAGGATTCATGAACAACACAGCCCAGCTTGGTTTGTTGACATGATCATTTTCTTCTTTTTGTTGATTTAGAGCATCTCCAACAGTCTCTCCAAATTCCACTCTTCAAATATCTATTTAGCCAACTATCCATTTAATTTGACAAGTTAAATCCGTTATTTACTCCAACAGCCTCTCCATTCATCCTCTCTATTATGAGTCTGTAACAGCGGGACCCATATGTCAGCCTTCTACATCACTTTCTTCCTCATTATCCTGCTCCCCCTCTTCCCCAAGCCCTTTTTGCTTGCGGCAGTGGTGCCCGCCCGCGGCGACGGCGGGGCAGCGGTGGCAGCGCGTGGCGACGGTGGGGCGGTGGTGGCCGCGCGCGGCGACGATGGGGCGGCGGTGCTCGTGCCCGACGACGACGGGGCGACGGTGGCCGGGTGCGACGACGACGGAGCGTTCCTCCTAATGGCGACCCTACTACTTATTGCTCGTCTCCCCACTCGGCACCCCCCATCTCTCTTTGTGCCAAAGGTAATCCATCCATTCCATCCATCGAATCCTGCTTCTTTTTTGCTTGTGCCTTGTGTTGCAAAGCAGTCTTGGATTCCTTCTGTTCGCATTGCCATGAGAGTTCTAGTTCGATCCCCAACTAAGAGCGTTTTGTTTTCGTTTTTTATTCTGTTCGTTCGTTCTTTCGATCTGCAGATCCTACAAACTCGCCTCGCGAATAACGATGGCATCGTCGCTGCCGTCGTCTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA003448