BGIOSGA003619

From RiceWiki
Revision as of 10:53, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA003619| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA003619, complete gene.| tag = P0455H0...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA003619

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA003619, complete gene.

LocusTag

P0455H03.41

Ensembl Transcript ID

BGIOSGA003619-TA

Ensembl Protein ID

BGIOSGA003619-PA

Length

3326

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:19864942..19868267

Sequence Coding Region

19864942..19866022,19867536..19867627,19867709..19867858,19867950..19868267

Genome Context

<gbrowseImage1> name=IndicaChromosome01:19864942..19868267 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:19864942..19868267 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCATTGCAGCCATTTACCGACGACCTCCTCGCCGAGATCCTTCTCCGCCTCCCGTCGGCGGCCTCCCTCCAACGCGCCGCGCTAGCCTCCAAGTGCTGGCTCGCCGTCGCCTCCGGCCCCGACTTCCTCCGCCGATTCCGTGCCCGCCACACCTCGTCGCCTCTCCTCGGCCTGTTCGTCTCCCACGGGAGCTCCGGCCTCCCCGTGTTCCACCCCGCCGCGACCGTCCGCTCCGACCCCGACCTCGGCGCCGCGGTACTCGGGGGCGACTTCTCGCTCATCCGCGTCGGGGACGGCGAGGATCCCCGCTGGCAACTCCGGGACTGTCGCAACGGCCGCCTGCTCCTCTGCGGATGTAGATCCGTCGCCGTCTACGACCCGGTGTCCCGCCGGCGCGTCTCCATCCGCCGCCCACAGGACGACCCCTTCTCGGACGCCTACATTGCCGACTGCTTGCTGCACGGGCGCGGCGACAACGGCGCGGCGTCGTTCCGCGTGGTGTCCGTGCAGCGCCATGGCCGGAGGATGCGCGCCGCGGAGTACAACTCCGGTACTCGAGAGTGGAGCTTCCACCCGTGGGTGGAAAACATGAGGCGGCCTCGCCGGGGCCAGGCGATGCATGCGGCGGGGATTATCTTCTGGAAATGCGAGGACAATTTTGTGATATTGCTTGACACGCTCACGATGGAATTCTCCATGCTCGGTCTCCCTGTAAGCTTGTTCCAGCCTTCCAAGTACGCCATAGGGGAGATGGAGGATGGCGTGTGCTGCCTTGTATGCCTTGATGGCACCATGGACAACGTCCACATGCAAGTGTGGCTGCTCATGGAGGAGGACGGTGGTGGCAGGAGGTGGGAATTGGAGAAGGAAATGCCGGTTAGTGAAGTGCTTGACAGGCATTCCCTGGTGCGACAAGTCCGAACAGTGGCTAGTGGATTGGTTCTTGTTTCCTGGGATGACCGCTATCCTCAATTTGCCATTGACCTGAAGAATATGAAGGTCATGGCTGAGTTTAGGTGCAGCGGCGAGACTTATCTTTTCCAAACGCCATGGCCACCCGCTTTGTTGGTCGATAGCGAATATGTGGAGCCGCTTCAGATGATCGCTACTCAGAACATGATGAAACATGTTAATCTTGCTGCAGAGAGAACTGATGTTGTGAATTCAGAGGGCCCATTGGATTTGGTATTGGAACCACATGGCCCACTGGACGCACAACAAGCTATGGCTGCTGAAGCGGAGACCTTGGTGGTAACAGCAGACCTGAAATTAGTCAGGTCTACTGAAGCACAAAACCAGTCAGTAGCTGAAAAACCTGAGATCATGAAGGGGCCTGAAGTCCCAGTTTCGAAAAGGAGCATGTCACGTTTGGAAAAAAGAAGAGGGGAAAGATATGAGAGTGCTCTCCACAAGGCAATGGAGAGGAAAGCTCGTTACATGGGTGGTGTGGAACAGCTTAGTACTTCTCTTGGAAGAAACTACAGAAGATCAGAGAAGCCAATTGTTGTGGACTCTAGTTACGAGAGATACTACCAGTGTCGTCAACGTCGAGAGAAGCCAATTGTTGTGGACTCTCGTTACGGTAAATACTACCAGCGTCGTCAACGACGACCAGCCGCAGGAGTTCAGGGAAGGTGA</cdnaseq>

Protein Sequence

<aaseq>MALQPFTDDLLAEILLRLPSAASLQRAALASKCWLAVASGPDFLRRFRARHTSSPLLGLFVSHGSSGLPVFHPAATVRSDPDLGAAVLGGDFSLIRVGDGEDPRWQLRDCRNGRLLLCGCRSVAVYDPVSRRRVSIRRPQDDPFSDAYIADCLLHGRGDNGAASFRVVSVQRHGRRMRAAEYNSGTREWSFHPWVENMRRPRRGQAMHAAGIIFWKCEDNFVILLDTLTMEFSMLGLPVSLFQPSKYAIGEMEDGVCCLVCLDGTMDNVHMQVWLLMEEDGGGRRWELEKEMPVSEVLDRHSLVRQVRTVASGLVLVSWDDRYPQFAIDLKNMKVMAEFRCSGETYLFQTPWPPALLVDSEYVEPLQMIATQNMMKHVNLAAERTDVVNSEGPLDLVLEPHGPLDAQQAMAAEAETLVVTADLKLVRSTEAQNQSVAEKPEIMKGPEVPVSKRSMSRLEKRRGERYESALHKAMERKARYMGGVEQLSTSLGRNYRRSEKPIVVDSSYERYYQCRQRREKPIVVDSRYGKYYQRRQRRPAAGVQGR</aaseq>

Gene Sequence

<dnaseqindica>1..1081#2595..2686#2768..2917#3009..3326#ATGGCATTGCAGCCATTTACCGACGACCTCCTCGCCGAGATCCTTCTCCGCCTCCCGTCGGCGGCCTCCCTCCAACGCGCCGCGCTAGCCTCCAAGTGCTGGCTCGCCGTCGCCTCCGGCCCCGACTTCCTCCGCCGATTCCGTGCCCGCCACACCTCGTCGCCTCTCCTCGGCCTGTTCGTCTCCCACGGGAGCTCCGGCCTCCCCGTGTTCCACCCCGCCGCGACCGTCCGCTCCGACCCCGACCTCGGCGCCGCGGTACTCGGGGGCGACTTCTCGCTCATCCGCGTCGGGGACGGCGAGGATCCCCGCTGGCAACTCCGGGACTGTCGCAACGGCCGCCTGCTCCTCTGCGGATGTAGATCCGTCGCCGTCTACGACCCGGTGTCCCGCCGGCGCGTCTCCATCCGCCGCCCACAGGACGACCCCTTCTCGGACGCCTACATTGCCGACTGCTTGCTGCACGGGCGCGGCGACAACGGCGCGGCGTCGTTCCGCGTGGTGTCCGTGCAGCGCCATGGCCGGAGGATGCGCGCCGCGGAGTACAACTCCGGTACTCGAGAGTGGAGCTTCCACCCGTGGGTGGAAAACATGAGGCGGCCTCGCCGGGGCCAGGCGATGCATGCGGCGGGGATTATCTTCTGGAAATGCGAGGACAATTTTGTGATATTGCTTGACACGCTCACGATGGAATTCTCCATGCTCGGTCTCCCTGTAAGCTTGTTCCAGCCTTCCAAGTACGCCATAGGGGAGATGGAGGATGGCGTGTGCTGCCTTGTATGCCTTGATGGCACCATGGACAACGTCCACATGCAAGTGTGGCTGCTCATGGAGGAGGACGGTGGTGGCAGGAGGTGGGAATTGGAGAAGGAAATGCCGGTTAGTGAAGTGCTTGACAGGCATTCCCTGGTGCGACAAGTCCGAACAGTGGCTAGTGGATTGGTTCTTGTTTCCTGGGATGACCGCTATCCTCAATTTGCCATTGACCTGAAGAATATGAAGGTCATGGCTGAGTTTAGGTGCAGCGGCGAGACTTATCTTTTCCAAACGCCATGGCCACCCGCTTTGTTGGTCGATAGCGGTAAGTCTTTCACACATCACTTAGGTACTTCCAAATATATGAGTGGATTGCTTCTTTAGACTACGAGTTGGAACTTACTGTGGATAACTTGCTATGAGAAGTGAGTTGATCTTAATTGATTGCTAGTGTAGTTTTGGTCACTGTGTTGGTAGAGGGCGAGCATTCCAATCACTTCAACAGCAACTTTTGGATTTAATTCTTAAAGAACTCAACTGAATTATAACTCTTTGGTTTCATGCTTCCTGAACTGAACTGACAGAACTACAAATTGGCTAATTTTATCTGTTTAATCCGAACTATTAGTTATGAAGAACATGTACATGTTTTTTGTAAAGTCATGTTTAGACTTTAGATGGCGCCCTGCCAATGGCCGCATTTCATGGTAGGCATACTGGTTTCAATTAGGCATCTATTGTTTTGGAAAGTAATTTAGATGTATCATAAAAATGCTACCCACACAGTTGTTTAGACATCTCATAAGATTTATGTGGTCATTTTTTAGTGGCTAACAAAAAGTAGGCATCACACTAACGAAAAATTGACGTTATTGTTTTGTTGCATTTCAGTTGGTTTGGCCTAAGTCAAGGTCAAGGTTGATTCATTTTCATCATTTTGCTAAACAAAAAATATCCACTCGATGCTGATCCAATGCACCTTAAACCACAGTGACCTTTTCTTGAGGTGTCAGACAAGATGCAGCTTGCTTGAATGTCCTCCTCCCTTGTTCTTATATACTACCTCCGTCCCATATAAATTGCAATTCTAGTTTGTTTAGTACTCCCTCCGTACTCATAAAGGAAGTTGTTTAGGACAATGTTTAAGTCAAACCTTGGGAATATAAATCATGAATAACTCTCAAGTTGTTGAGTTTGAAAATGTAAAAATTATATGAATAGATTTGTCTTGAAAAATACTTTTATAAAAGTATACATATATCACTTTTCAATAAATATTTTTATAGAAACAAGAAATCAAAGTTGTGTTTTGGAGACCGTGTCGCTGTCCTAAATGACTTCCTTTACGAGTACGGAGGGAGTATATATTAAGGTTTGAGAAGAAATACTATGATGCCCCTTATTAAATGGTGTATAGGTAAGAGTGGAAGGGTAGTGGAGGGTAAAATAGAAAAAGATTAAATGAGAAGTGATTAATGAGACCTATTAGTACTCTATTGTGACAATTATTTTGGGACAAATTCAAATCCTAGAAATACAATTATTATGGGACAGATGTAGTAGTTTTCAGCAATGTTCTTGTGATTCCCATGGTGTTAAAGCACTAGAGAAACTTATTACATGGTAGTAATGTTAGTGCCAAGTTCAGTACGGTATACAGTGGCAGTAGGAGGGGAAGGCTGGATGTATGACTGAGAGTCAAGTAGTTAAGAATGGAATAGTATGCTGTTTTCCTGTATTATATTGATGCTCAACCGTACAAAAATCATTGTTTAGCTTATTTGTATACCCTACAGAGGTTCAACCAGCGGATTTGGCTATTCCTTTACAATCTGCAGAATATGTGGAGCCGCTTCAGATGATCGCTACTCAGAACATGATGAAACATGTTAATCTTGCTGCAGAGAGAACTGATGTTGTGAATTCAGAGGTAAAGATCAGCTTCAGAGTTTCCTTTGTGAAATTTGTGTTGTTCTGATAATCTGTAACTAGTAACTACATATGCATGCAGGGCCCATTGGATTTGGTATTGGAACCACATGGCCCACTGGACGCACAACAAGCTATGGCTGCTGAAGCGGAGACCTTGGTGGTAACAGCAGACCTGAAATTAGTCAGGTCTACTGAAGCACAAAACCAGTCAGTAGCTGAAAAACCTGAGGTATTTAGCACTTGCTGCCTGATTTGTTTCTCTGTCAAAATTGTTACTCAAAGCATTACAACTCTGCATATTTTCCCAATGATCGAATCAGATCATGAAGGGGCCTGAAGTCCCAGTTTCGAAAAGGAGCATGTCACGTTTGGAAAAAAGAAGAGGGGAAAGATATGAGAGTGCTCTCCACAAGGCAATGGAGAGGAAAGCTCGTTACATGGGTGGTGTGGAACAGCTTAGTACTTCTCTTGGAAGAAACTACAGAAGATCAGAGAAGCCAATTGTTGTGGACTCTAGTTACGAGAGATACTACCAGTGTCGTCAACGTCGAGAGAAGCCAATTGTTGTGGACTCTCGTTACGGTAAATACTACCAGCGTCGTCAACGACGACCAGCCGCAGGAGTTCAGGGAAGGTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA003619