BGIOSGA003830

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Revision as of 10:57, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA003830| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA003830, complete gene.| tag = B1097D0...")
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Gene Name

BGIOSGA003830

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA003830, complete gene.

LocusTag

B1097D05.16

Ensembl Transcript ID

BGIOSGA003830-TA

Ensembl Protein ID

BGIOSGA003830-PA

Length

3217

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:24935868..24939084

Sequence Coding Region

24935868..24935915,24936928..24937099,24937190..24937325,24937418..24937631,24937800..24937943
,24938033..24938140,24938229..24938325,24938409..24938540,24938668..24938800
,24938919..24939084

Genome Context

<gbrowseImage1> name=IndicaChromosome01:24935868..24939084 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:24935868..24939084 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGACTCGCCATTTACCCGAGTTGTTCACTTTGCTTCAAGACAACGAACTGCTGCCCATACCCGATGAAAATTCAGTTCTTGATTTGGTCATCATTGGCTGCGGTCCAGCTGGCTTATCCCTAGCAGCAGAGTCAGCTAAGAAAGGGCTCAATGTTGGTCTCATTGGCCCTGATCTTCCATTCACGAACAACTACGGTGTGTGGGAGGATGAATTCAAAGACCTGGGCCTGGAGAGCTGCATTGAACATGTCTGGAAGGATACTATCGTGTACCTAGACGGTAACAAGCCAATAATGATTGGCCGTGCGTATGGCAGGGTTCACAGGGACTTGCTGCACGAGGAGTTGCTGAGACGATGCTATGACGCTGGCGTCACATACCTCAGCTCGAAGGTGGACAAGATCATGGAATCTCCTGATGGACATCGGGTAGTCTGTTGTGAAGGGGATCGTGAGGTACTTTGCAGGCTTGCCATTGTTGCATCTGGGGCAGCATCTGGTAGGCTTCTAGAGTACGAGGTTGGTGGTCCGCGTGTTTGTGTGCAGACTGCATATGGTGTCGAAGTCGAGGTGGAAAACAATCCATATGATCCCAGCTTAATGGTTTTCATGGACTACAGAGATTGCTTCAAAGACAAATTCTCACATCCTGAGCAAGGAAATCCAACGTTCCTCTATGCCATGCCCATGTCATCCACACGAATTTTCTTTGAGGAAACATGCCTAGCTTCTAAAGAAGCAATGCCCTTTGACCTCCTTAAAAAGCGGTTGATGTCTCGGTTGGATGCAATGGGAGTTCATATTCGAAAAGTATACGAGGAGGAATGGTCCTACATTCCTGTTGGAGGGTCCTTACCAAATACAGACCAGAAAAATCTCGCATTTGGTGCGGCAGCAAGTATGGTGCATCCTGCAACCGGATACTCGGTGGTTAGATCATTGTCTGAAGCTCCAAGATATGCATCTGTGATATCTGATATCTTGAGAAACCGTGTCTACCCTGGACAATATTTGCCTGGAACCTCTCAAAGTTCCAGTCCATCAATGCTTGCATGGAGAACATTATGGCCCCAAGAACGGAAACGTCAACGATCATTCTTCCTTTTTGGGCTGGCTTTGATAATCCAACTGAATAACGAAGGCATTCAGACATTCTTTGAAACCTTTTTCCGGTTGCCCAAATGGATGTGGCGAGGATTCCTTGGTTCGACGCTTTCTTCAGTGGATCTCATACTCTTTGCATTCTACATGTTCACAATTGCGCCGAACCAAATGCGAATGAACCTTGTCAGACATCTCCTCTCTGATCCGACCGGCTCAACGATGATCAAGACCTACCTGACCTTGTAA</cdnaseq>

Protein Sequence

<aaseq>MTRHLPELFTLLQDNELLPIPDENSVLDLVIIGCGPAGLSLAAESAKKGLNVGLIGPDLPFTNNYGVWEDEFKDLGLESCIEHVWKDTIVYLDGNKPIMIGRAYGRVHRDLLHEELLRRCYDAGVTYLSSKVDKIMESPDGHRVVCCEGDREVLCRLAIVASGAASGRLLEYEVGGPRVCVQTAYGVEVEVENNPYDPSLMVFMDYRDCFKDKFSHPEQGNPTFLYAMPMSSTRIFFEETCLASKEAMPFDLLKKRLMSRLDAMGVHIRKVYEEEWSYIPVGGSLPNTDQKNLAFGAAASMVHPATGYSVVRSLSEAPRYASVISDILRNRVYPGQYLPGTSQSSSPSMLAWRTLWPQERKRQRSFFLFGLALIIQLNNEGIQTFFETFFRLPKWMWRGFLGSTLSSVDLILFAFYMFTIAPNQMRMNLVRHLLSDPTGSTMIKTYLTL</aaseq>

Gene Sequence

<dnaseqindica>1..48#1061..1232#1323..1458#1551..1764#1933..2076#2166..2273#2362..2458#2542..2673#2801..2933#3052..3217#ATGACTCGCCATTTACCCGAGTTGTTCACTTTGCTTCAAGACAACGAAGTGAGATTGCTTTTACAGTTTTACGTGGCTGCGAAAAATAAAGTTAGGCATGGGCAACGTGGCAAACACGTGCATTATCAGCCTTATGATGATCAGCACAGGTACTACCACGCAACAGCGAGTAGATATTCATGCTTTCAGATGCGCCGCTTACTTACACACGAGGCAACCCATCGATCGATCCATCTGCATTCGAGCTCACATTTTTCATCACAAGAAGGGCTGCAATTAATTAGGCAGCTCCATATCATAAGCCAAAGTTTATACATTAAAATTTGGATCTGTTTGACAATATAAGTTTTTCCGAAAGTTATAATATAAATTATAAGATGAAAAATAATTGTGATTGGTTGAGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGACGGGTGTGGAATGTTGATTCACGTGATGCTATCACGAATCTGGTTGCCCATGCTTGCTGCTGCCTGCCATATCTCTGTGGAGCTTGGACTATTCTCCATGTCTCCTGTAATGGGAGCTCACGTCGTCGCCTGTACAAAAGGTGTTAATTAGGGGATAAGTTAAGAGTATCTCATACTGTGCTCAACTCAACTGCTGACTAATTACACCTTCGGATGCAACTTGGAACGTACTGTTGCATTAATTATTGTCTGCTTGCAAATTTCTCAGAGATGTTGAATTTGATGAAGTGTACGTGCGTCGCATTTGCAGTCCAACATCACACCTTTGACTTGATGTGATTCAAGCAACAAGTGAAGTGCTAGGCTAAACACAAGCACAGTTCCCCGAAATCATGCCATTTATTCTTGACACATGGACATCCTGGAAATTGTTCAAAGTTTCTAGACTGCTAGGAATGCGAATAACTTGTACTGAACTTTTGAAACATTTTTGTCAGCCCAATCAGGATTTTTTTTAGTTTATTTCCTGAAACTCTGCATTGGAACGAATAAATAAACGGTGTCTCAAGAAAATAAAGCACGTGCTCTGAATCTTTGTGTGCAGCTGCTGCCCATACCCGATGAAAATTCAGTTCTTGATTTGGTCATCATTGGCTGCGGTCCAGCTGGCTTATCCCTAGCAGCAGAGTCAGCTAAGAAAGGGCTCAATGTTGGTCTCATTGGCCCTGATCTTCCATTCACGAACAACTACGGTGTGTGGGAGGATGAATTCAAAGGTAGCATACTATTTTCAGCACTGAATAACATTGTTGCCATCATAATTTGGTACATGATGGACTTATGGCTCTTGATCTTTTGCTATCCAGACCTGGGCCTGGAGAGCTGCATTGAACATGTCTGGAAGGATACTATCGTGTACCTAGACGGTAACAAGCCAATAATGATTGGCCGTGCGTATGGCAGGGTTCACAGGGACTTGCTGCACGAGGAGTTGCTGAGACGGTAAATTTTCAGTTAGCAATCTTGAGAGTAAACAGAGTCAGGCAAAGTGATACAAAATTATTGATGAAAAATTATACTCTAAAAACTGTCAGATGCTATGACGCTGGCGTCACATACCTCAGCTCGAAGGTGGACAAGATCATGGAATCTCCTGATGGACATCGGGTAGTCTGTTGTGAAGGGGATCGTGAGGTACTTTGCAGGCTTGCCATTGTTGCATCTGGGGCAGCATCTGGTAGGCTTCTAGAGTACGAGGTTGGTGGTCCGCGTGTTTGTGTGCAGACTGCATATGGTGTCGAAGTCGAGGTATGCACAACTCCTATAGAACTTACTCCCCTCGAGAGTTTAGAATAGTTTCCCTTCTGTCGTCGTGTTTCTACGAGCATTTTATTCATATTGTTTCAAGCTGAAAATTTTAGATATGTTATTTGGGCACATGTCATTCATCTTTCACAATGATTTGAAAATTTTCAGGTGGAAAACAATCCATATGATCCCAGCTTAATGGTTTTCATGGACTACAGAGATTGCTTCAAAGACAAATTCTCACATCCTGAGCAAGGAAATCCAACGTTCCTCTATGCCATGCCCATGTCATCCACACGAATTTTCTTTGAGGTCCATATGAGAAACTTTATCACAATTTATTCCTCCGACTAGTATTTTCCCATGCTTTTGTGTTGCTGATGATAATTATTTCAAGACAGGAAACATGCCTAGCTTCTAAAGAAGCAATGCCCTTTGACCTCCTTAAAAAGCGGTTGATGTCTCGGTTGGATGCAATGGGAGTTCATATTCGAAAAGTATACGAGGAGGTAACAAGTTATGGCTTGGTGTCACTAGTTGTTTCTCTTGCATAGGTGAAGTGGAAACTTAACCTAAATGCTGAACTCTTGATTTCAGGAATGGTCCTACATTCCTGTTGGAGGGTCCTTACCAAATACAGACCAGAAAAATCTCGCATTTGGTGCGGCAGCAAGTATGGTGCATCCTGCAACCGGTACTTACAAATCCTCAATCCGTACTTTCAATTTCTCTTGTATTTACAGGCAATAATATAATATTTATCTGTCAAAAACATAGGATACTCGGTGGTTAGATCATTGTCTGAAGCTCCAAGATATGCATCTGTGATATCTGATATCTTGAGAAACCGTGTCTACCCTGGACAATATTTGCCTGGAACCTCTCAAAGTTCCAGTCCATCAATGCTTGGTAAGCTTACACAAGCACACCAGTATTACAAATTGGAGTACATTGCTTCAGATGAGGGCAGTATTTTAGTATAATTTTGGAAATGTCAGGAACATTTTCTGGTACTAATTGCTATGCGGTGTTGCAGCATGGAGAACATTATGGCCCCAAGAACGGAAACGTCAACGATCATTCTTCCTTTTTGGGCTGGCTTTGATAATCCAACTGAATAACGAAGGCATTCAGACATTCTTTGAAACCTTTTTCCGGTTGCCCAAATGGTAATTCTACTCTTGATTGCATTTGCCTCTGTTTTCAGTCTATTTACAAATACCATTATGTATGACCTGAAGATTGCCACCCAACAAAGTGTTCATCACTGTTCTTTGTTACTATCAGGATGTGGCGAGGATTCCTTGGTTCGACGCTTTCTTCAGTGGATCTCATACTCTTTGCATTCTACATGTTCACAATTGCGCCGAACCAAATGCGAATGAACCTTGTCAGACATCTCCTCTCTGATCCGACCGGCTCAACGATGATCAAGACCTACCTGACCTTGTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA003830

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA003830&oldid=41554"