BGIOSGA003872

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Revision as of 10:58, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA003872| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA003872, complete gene.| tag = OsI_026...")
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Gene Name

BGIOSGA003872

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA003872, complete gene.

LocusTag

OsI_02641

Ensembl Transcript ID

BGIOSGA003872-TA

Ensembl Protein ID

BGIOSGA003872-PA

Length

1288

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:25682530..25683817

Sequence Coding Region

25682530..25682614,25682758..25682966,25683071..25683417,25683523..25683817

Genome Context

<gbrowseImage1> name=IndicaChromosome01:25682530..25683817 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:25682530..25683817 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGCTAACCATTACAGGACACTCCAGAGGCAAAGACTTCATACAGGATCACAGGACTTCAGAGGCAAGAGACAGTGACAACCAGAATATCACAATAGGAGTACCAAGCAGAGATGCTCGGTCCCAGATCGAAGATCCAAGACCGGATGGCTGGGCTGTTCACCAGGCAGGCTGCCGAGTACGCCGCGGCGCGGCCGCTCTACCCAAGGACCTGTTCGTCAAGCTCGCGTCGCTCACCGCCCACCACCGCGTCGCCTGGGACGTCGGCACCGGCAATGGCCAGGCCGCCATCGGCGTCGCGGAGCACTACGACAGCGTGGTGGCGACGGACGTGAGCGCGGAGCAGCTGCGGCGCGCCGTGCCGCACCCGAAGGTCCGGTACCTCCACACCCCCGACGCCGGTGCCGACGACGACGACCTCGTCGCGGCGCTCGGCGGCGAGGGCTGCGTCGACCTCATCACGGTGGCCGAGGCGGCGCACTGGTTCGACCTCCCGGCGTTCTACGGCGCCGCGCGGCGGCTCCTGCGGAAGCCCGGCGGCGTGATCGCGGTCTGGGGGTACAACTACCGCGTCAGCCCCGTGGAGGACATGATGTCCCGCTTCCTCCACACCACCCTGCCCTACTGGGACTCCAGAGCTCGGTACGTGATCGACGGGTACCGGGACCTGCCGTTCCCGTTCGACGGCGTCGGCCTCGGGAAGGAGGGCGAGCCGGCGGGCTTCGACATGGAGCACGAGATGGCGTTCCCGGGCCTCGTCCGAATGCTGAGGTCGTGGTCGGCGGTGGCGACGGCGAGGCAGCGGGGCGTGGACCTGCTGGACGAGCGCGTGGTGAGGCGGCTGGAGGAAGAGTGGGGTGGCGCGTCGCTGGTCCGCAAGGTCACCTTCAAGGCGTTCCTGCTTGCCGGCACCGTCAGGGCCGACGACCCTGCTTGA</cdnaseq>

Protein Sequence

<aaseq>MLTITGHSRGKDFIQDHRTSEARDSDNQNITIGVPSRDARSQIEDPRPDGWAVHQAGCRVRRGAAALPKDLFVKLASLTAHHRVAWDVGTGNGQAAIGVAEHYDSVVATDVSAEQLRRAVPHPKVRYLHTPDAGADDDDLVAALGGEGCVDLITVAEAAHWFDLPAFYGAARRLLRKPGGVIAVWGYNYRVSPVEDMMSRFLHTTLPYWDSRARYVIDGYRDLPFPFDGVGLGKEGEPAGFDMEHEMAFPGLVRMLRSWSAVATARQRGVDLLDERVVRRLEEEWGGASLVRKVTFKAFLLAGTVRADDPA</aaseq>

Gene Sequence

<dnaseqindica>1..85#229..437#542..888#994..1288#ATGCTAACCATTACAGGACACTCCAGAGGCAAAGACTTCATACAGGATCACAGGACTTCAGAGGCAAGAGACAGTGACAACCAGAGTGATTTCATCAGCCATGTCATCATCCATGATCCATTCGTCTTTAGACAATTGTTTTTCGATCAAGTGGACAACACAGTGAATTGGTGATGTTGTCATCTTGTTTATGCTTTTTTTTCCTCACCTGTGTTTGGTCCTTTGCAGATATCACAATAGGAGTACCAAGCAGAGATGCTCGGTCCCAGATCGAAGATCCAAGACCGGATGGCTGGGCTGTTCACCAGGCAGGCTGCCGAGTACGCCGCGGCGCGGCCGCTCTACCCAAGGACCTGTTCGTCAAGCTCGCGTCGCTCACCGCCCACCACCGCGTCGCCTGGGACGTCGGCACCGGCAATGGCCAGGCCGCCATCGGCGTAAGCACTCCAATTCTCCAGCTTTCTCTAGGATGCCTTCACAAAGCCTGTGCCTACCTAACGTTGACATTTACCGGCATCCCATCCGGGTTGCTGTTTGCAAGGTCGCGGAGCACTACGACAGCGTGGTGGCGACGGACGTGAGCGCGGAGCAGCTGCGGCGCGCCGTGCCGCACCCGAAGGTCCGGTACCTCCACACCCCCGACGCCGGTGCCGACGACGACGACCTCGTCGCGGCGCTCGGCGGCGAGGGCTGCGTCGACCTCATCACGGTGGCCGAGGCGGCGCACTGGTTCGACCTCCCGGCGTTCTACGGCGCCGCGCGGCGGCTCCTGCGGAAGCCCGGCGGCGTGATCGCGGTCTGGGGGTACAACTACCGCGTCAGCCCCGTGGAGGACATGATGTCCCGCTTCCTCCACACCACCCTGCCCTACTGGGACTCCAGAGCTCGGTACATTACCACTTGGGCACAGCACACATTGCAATTTTACAATCTTGCAATTGCAAGCAAGCACCATCCATGGCGAAAAGAAAGCTTGACATGCTGCTCTTGCAGGTACGTGATCGACGGGTACCGGGACCTGCCGTTCCCGTTCGACGGCGTCGGCCTCGGGAAGGAGGGCGAGCCGGCGGGCTTCGACATGGAGCACGAGATGGCGTTCCCGGGCCTCGTCCGAATGCTGAGGTCGTGGTCGGCGGTGGCGACGGCGAGGCAGCGGGGCGTGGACCTGCTGGACGAGCGCGTGGTGAGGCGGCTGGAGGAAGAGTGGGGTGGCGCGTCGCTGGTCCGCAAGGTCACCTTCAAGGCGTTCCTGCTTGCCGGCACCGTCAGGGCCGACGACCCTGCTTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA003872