BGIOSGA003915

From RiceWiki
Revision as of 10:58, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA003915| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA003915, complete gene.| tag = OsI_027...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA003915

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA003915, complete gene.

LocusTag

OsI_02705

Ensembl Transcript ID

BGIOSGA003915-TA

Ensembl Protein ID

BGIOSGA003915-PA

Length

3776

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:26205924..26209699

Sequence Coding Region

26205924..26206115,26207230..26207347,26207728..26207810,26207894..26207950,26208430..26208538
,26208656..26208708,26209071..26209151,26209242..26209354,26209630..26209699

Genome Context

<gbrowseImage1> name=IndicaChromosome01:26205924..26209699 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:26205924..26209699 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGTCGTGTCATTTTCTGCAAGTCAATCGACAAGAGGATTATCGAAGTACAGATACAGAAGCAGGCGCTGCTGCTAGAAGAGAAGGATATAACAAGCGGCGGCCGGAGACGACGACGGAGAAATCCGGAAGAAGAGGAACTGCCGGCGCTGAGCTGCAATCGCGCCCAAGAATCCATCTCCTCCGGCGGCAGCAAGTGGGTCGTTCAACACATTCCTTGAATCCACGGGAAGCTGTGGCTCTTGCGGCTGAAACATCTTGTGAGAACGTCGATCTACCAGATTTCGTTAATATTGCCACTGGAACACCCTTTACTGTGAATGAAGTTGAGGCATTATATGATCTCTTCAGGAAATTAAGTAATTCAATAATTAAAGATGGTCTGATTCACAAGGAAGAATTCCATCTTGCTCTCTTTAGGAACAAGAAGACAAATCTCTTCGTTGATAGGGTCTTTGATTTGTTTGATCAAAAAGGAAATGGTGTCATCGAATTTGATGAATTTGTTCGATCTCTTAGTGTGTTTCATCCAGATGCACCTGAGGAACAGAAAGCTGGATTTGCATTTAAGTTATATGACCTAAGACAGACAGGGTTTATTGAAAGGCATGAGTTAAAGGAGATGGTGTTGGCTCTTCTGGATGAATCAGATTTGAATATTACAAGTGATGCTGTCGAGATGATTGTTGATAGGACATTTGACCAGGCTGACACAAAAGGCGATGAGAGAATAGACCAGGAGGAGTGGAATGAGTTTGTCAAAAATAATCCATATGTGCTGAGGAATATGACCCTCCCATACCTCAAGGACCTCACCATGGTATTCCCAAGTTTTGTGATTCACTCAGAAGTCAGCGAAGCAGACATGGTTGCCTAA</cdnaseq>

Protein Sequence

<aaseq>MSCHFLQVNRQEDYRSTDTEAGAAARREGYNKRRPETTTEKSGRRGTAGAELQSRPRIHLLRRQQVGRSTHSLNPREAVALAAETSCENVDLPDFVNIATGTPFTVNEVEALYDLFRKLSNSIIKDGLIHKEEFHLALFRNKKTNLFVDRVFDLFDQKGNGVIEFDEFVRSLSVFHPDAPEEQKAGFAFKLYDLRQTGFIERHELKEMVLALLDESDLNITSDAVEMIVDRTFDQADTKGDERIDQEEWNEFVKNNPYVLRNMTLPYLKDLTMVFPSFVIHSEVSEADMVA</aaseq>

Gene Sequence

<dnaseqindica>1..192#1307..1424#1805..1887#1971..2027#2507..2615#2733..2785#3148..3228#3319..3431#3707..3776#ATGTCGTGTCATTTTCTGCAAGTCAATCGACAAGAGGATTATCGAAGTACAGATACAGAAGCAGGCGCTGCTGCTAGAAGAGAAGGATATAACAAGCGGCGGCCGGAGACGACGACGGAGAAATCCGGAAGAAGAGGAACTGCCGGCGCTGAGCTGCAATCGCGCCCAAGAATCCATCTCCTCCGGCGGCAGGTATGGTGATTTCGTCTTCCTCGAACTCCTCCGTTTCTTTTTCCTTTTTTTTTAAAAAAAAATCATCCATTTCTCCCCTGATGGAGTGGAGTGGAGAGCTCCGTTTCTCGTCTTCTCGGTGGATTTGGTCATTCGGGTAGTGCTACCGTTTCTTGATTTATCCTGCGGAAATCGTGCTCTTCCGCATTGATCTTATAGGCTGGTGGGAGGCGCCGAGCCGCCCATTTGAGTTGAGGGGTTGACCAATCTGAGGAATATTCTGACGGCGTTATATAATTCGGACAATCGATGCACAACTGGGGCCCAAAAACAAAAAAATGTTCCTTTCTTAAACAGTTGGTTCAGAATGGGATTTTTTTTTCTTTTTGGTAATTTTTATTTTTTGTTCCTTCCCGATTACCGTGAACAGTTTTTACAAGCAATCTACATGTCTGGTCATGAACTTAACATCTCTAAAATATTTACTCTATTATATATATCATACACTGTTCAACTGAATTGAGATTGCTTTTTTTTTTCTTTTTTGTAGTTTTATTTGTTTGTTCCCTTCCAAGTACCATGAACAATCTTGCAAATTACAATCCATTTACATGTTTGGCCACGGCTTGAAATGTTAATCCAGTATATGGAGAATCATATACGGCTGAACTGACTTAAAACACTTTAGTGTTTGACAATATAAATCACACTGTTGAACTTTGTTTTAGACTTAAGATACTATATAGTATTTAACAGTAACAGTATGTTGTACTATGTATCATATATGCACTGCTGAACTATCTTAAGAGACTGTAGCGTTTAACAGTAAAAGATTGCCACCTGTAATTTCCTGAAGGATATAAGCAGTTAGGAACATCTTTTTTTCGCCGGGCCGGCAAAGAACACCGGCCACAGTTAGGAACATCTTTGTTGCTGTATATTCGTAATGCACCCCTATATTCCCTTCTTGTTCTGTTCTTATTGCTGTTTTATTTGCATGTACAGCTTACAGGGTCGCTGCTCCATCTCCTTGAATTGTACTAGCTGTTCTTGTGCTTAAGATTTGCGCTCGGCTTCATTTTTGGATTCAAGCTGCTGGGTGTGGATTTTTATGATGGGCTGTCTACCAACAAAGCAAGTGGGTCGTTCAACACATTCCTTGAATCCACGGGAAGCTGTGGCTCTTGCGGCTGAAACATCTTGTGAGAACGTCGATCTACCAGATTTCGTTAATATTGCCACTGGAACACCCTGTGAGAATTGAAATCCATCTTTCCATAAGAAAGAAAAAGGATTTAGTTTGTTTTTGGATATTTTTATGATTCTGTCTTAAAATGTGTGGATTAGCTTTTCTTATGTTAGTCGTTCAAAATCAAACAAAATGACAATGCACTGCATATATGATGTGTATTATCCTGAGTAGAATGGAACTTTGAACCAATAACTTCTTTTCTACCACAGTACGAGTAACCCAATGGATGCCTCCTATTAGATTTGCAGGGTAGGCCAATTTCATCTAAAAAAGCATGTTATACATTATCATGGATTGCGTATAGTTCTGTAATGTTACCTGAAATACATATATTTTTCCGGGTTTTACAACAAGTTTCTTAACATTTTTCTATTATTGCAGTTACTGTGAATGAAGTTGAGGCATTATATGATCTCTTCAGGAAATTAAGTAATTCAATAATTAAAGATGGTCTGATTCACAAGGTAATAAGTGCTTCCGCATAATTTTGATTGGTACAAGTTTTTAAGATATTTGTCATGCAGCTTATTTTGTTTTTCTTATCCAGGAAGAATTCCATCTTGCTCTCTTTAGGAACAAGAAGACAAATCTCTTCGTTGATAGGGTAAGACTTAAGAGTGTTAATATGTTCCAAATTGTCATTGTATAGGTTTTCCTGATGATTCCTCTGTTCTTCAGTGCTAACAGTTTATATTAAAAATAATAATATTTATTCTCCATATTCTTTTTGAATTAATATGTCCAAATGATGTTTGCAGTCCACATTCTTTCTACTTCACAATAGTATGCAAGAGAACTGCATATCATTATATAAATCGTAGAAAAGATTCCCACTTTACATTCTTGTGCTCATTGTTTTTAGTCATCCACCATCAACACTCATATGTTATCCTTCCTAAAGGTGAATCCATATAAGTGGCCTGAAGCAGTGTAATTTCTCTCTTGAGCATTAGAGCAACATTTAAAAACTAACAAATAGAATAGATTTTACATGACAGGCTTCCGGTTTAAAAAAGGGTAATTTTGAATGTATTGGCATTCAGTATTATCAGTAAATATTTATGTGTTTGAAAATAATCGCAGGTCTTTGATTTGTTTGATCAAAAAGGAAATGGTGTCATCGAATTTGATGAATTTGTTCGATCTCTTAGTGTGTTTCATCCAGATGCACCTGAGGAACAGAAAGCTGGATGTAAGGACTCTTCAGTCAATTGTTTATTCTTACCAAAAACATGTCGGGCATAAGAATATAGATGTTTAGATTTGAACATTTGCTTTCACCAATTAATGTTATAACTTCTTATTGCAGTTGCATTTAAGTTATATGACCTAAGACAGACAGGGTTTATTGAAAGGCATGAGGTAAGTGTTACTTTTCTCTTCTTTTAGTTCCAGAAAATTGATTTGAGCACCGTTTGATATACTTTTTAATGCTCAGTAGCACTTTTTTTACTGAATCACAGTCAGATATCTATATTGTCAGGTATAGATATTACCTAGAAAATTATCATCTTAGTGAAACAAATTAACAGATTGGGCAGCTACATAACATGTTTGAAATTGCATGAGAGAAGTTATGCTTGTTTGTATTTCTAAGAGTTGTTGTGTAAACTTTGGTTCTATTTTGGTATTTAATCATTTCTCCCCTCGTCTATAGCAATGAAATCATGCTAACTCTGCTGATTTTATTTTCTCTTTGCTATTCTTTATTTTTTTTTTTGTAGTTAAAGGAGATGGTGTTGGCTCTTCTGGATGAATCAGATTTGAATATTACAAGTGATGCTGTCGAGATGATTGTTGATAGGGTATGGGTCCTAACTCCCTAGAACACCAAGTAAATATGTCCTTCTGTATTGTTCTAAGTCTTTTTAAAAACAAAAAAAAAACAAAAACAGACATTTGACCAGGCTGACACAAAAGGCGATGAGAGAATAGACCAGGAGGAGTGGAATGAGTTTGTCAAAAATAATCCATATGTGCTGAGGAATATGACCCTCCCATACCTCAAGTAAGTGCTATGCACAAATTTACTACCACCATGAATAGAGTTGCTCTGCTATGTAGAATGTTTTTACTTGGAGTCACACTAGCAATTATACTCAACAATATTTCTTAGAACTTGCACTCGTCAGTGCCAAAACGTAGAATCAGACGCTTGTCAATGATAGCGATTGGGGGAAAAAAGGATGATAATGGGCTTCACAATCACAATTGACTATAGTCATGTTTTTGTCATATGTATTGCGCATTAACTAATTATTATTGGTTGGTGATATTCTTTAGGGACCTCACCATGGTATTCCCAAGTTTTGTGATTCACTCAGAAGTCAGCGAAGCAGACATGGTTGCCTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA003915

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA003915&oldid=41639"