BGIOSGA003934

From RiceWiki
Revision as of 10:58, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA003934| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA003934, complete gene.| tag = OsI_027...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA003934

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA003934, complete gene.

LocusTag

OsI_02751

Ensembl Transcript ID

BGIOSGA003934-TA

Ensembl Protein ID

BGIOSGA003934-PA

Length

2039

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:26592479..26594517

Sequence Coding Region

26592479..26592526,26594166..26594306,26594395..26594517

Genome Context

<gbrowseImage1> name=IndicaChromosome01:26592479..26594517 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:26592479..26594517 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGAGAGTTTCCAACCCAAGGGCTGAAGAAAGAGCCGATGAAAAGTGGGCCATCCAAAACGTCATCCGCGCCAGTGACTACATCACGCTGTTGCACGTCTGCCCGCCAGCGAGGTTGCGCAGCCTACGCCTCGGCGGCTTCCAGTTCGCCCTCGCCTTCAGGGAGCTCTGCAACGGCATCGCGGAGGCGAAGTTGGAGATAGTGTTTAGGGAGGGGAAGGTCGGGGAGACGGTGGTGGTAACGGTGAACCAGCTCGCCGCCACCACGCTCGTCGTCGGTCTCCACGACAAGATTCCTCAACTGAACTGA</cdnaseq>

Protein Sequence

<aaseq>MARVSNPRAEERADEKWAIQNVIRASDYITLLHVCPPARLRSLRLGGFQFALAFRELCNGIAEAKLEIVFREGKVGETVVVTVNQLAATTLVVGLHDKIPQLN</aaseq>

Gene Sequence

<dnaseqindica>1..48#1688..1828#1917..2039#ATGGCGAGAGTTTCCAACCCAAGGGCTGAAGAAAGAGCCGATGAAAAGGTATGAAGTGCAGTGGATGTGGCGTTCGCGAAGCAAGCGTGGATGCGGCGGAAGAAATCGCCGAAGTCAGCGAAGAAGCCCCTCTTTGTGTGGACCTCTTGCTCATCTTCCTGTTCGTTGTCCTCCTCATCCTCCCTCCATGACCCTCACCGCACCAAACGTGCTTCCGCCACCCACATATCCACCTTTTCTCGCCACAAATCCATCCATCCACTGCGCGGTTGGTGCCCACCTCCTCCAACTACACATCCATGATCCATCCATCTGTGGCCGTGGTCGGCTGCCCTTCTCTTCGCCACCCGCGGCCGGCCACCTTTCTCCCTATCGCCTGTTGGATGGCAACCGCCGCCTCCTCCTGCCACAAATACATCAATCCATCGTTGTGATCAGTTGCCCTTCTCCCCACCACCCGCCAGATGGTGGACGCTGCCCCTATCCACGCCGCTTGCGCCTACCTCCCGCTACCTAAACGGCCTTATCCTTCTAGCCCTACCTTATCCGCCTGTTGCCTTCTAGGGAAGAGGCTGCTAACATGTGGGGCCCGCGTGGGGCCCACGTTGACTCAGCACAAACTGACTAGAGTCAAAGCGCCACGTCGTACGAAACCAAGAGCCATATTATTTAGGGATGAAAGTTGACACAGTTTGTGAGTTCAGGAACGGGTTATACCTAGACCTAAAGTGAACTTATTCCTTCACCCAAACACAATCCACAAGCAGCTTCAACCTTGTGCCTCGGGCCTCGCTTAGAGTTTAGGCTCAGTCTGTTCGATTTTGCTATATATTTATCGACAAATTTTCTCTCTAAAATTAGTTTAATTACACTATAACTCGTATATAACTACAGTGTAACTTGTATATAACCTTCTTATAATTTTAAACTTTTAGATTTTCTTTAAGGCTTATGCAAGTGAGAGAGAAAAAAATCACAGTGCGAGCGGGTTCGGTCCCAAGATCTCCGTTTTACGGTAAAAGCATGGTAATGAGGGATTTTTGAAAGTTATACATTATAGTTATATGCAAATTACAATGTAATTATATCATGATTATATTATTACTTACATCTGTTATATTTTTGGAGGAAAATTTGTCAATAAATATATAGGCAGTCCCGGTCCGTTCGTGTTCCACGCACTGTGGGCACTGTGAATGTGTGACTAAATGGGCCGAGCCCAACTACTATAGCTAAGTCGCGGTGTCCATCTCACCATATCCCGGAAGGCAAAAAGTACACCGAAGGTCCCTCAACTTGTCATCGAGTTACAAAATCGTCCCCCAACCGTAAAACCGGATACAACACATCCCCTAACTTACAAAAACAGTGTAAATTAGGTCCCTCAGCGGTTTTGACCCGGTTTTGTCTCACGTGGCGGCTGAGTCAGCGTGAGACCCACGTGGACCCCGCATGGCAGGGTGTCCCTGTCAGCTCCTGCTCTCTTTCCTCTCTTCTCTTTTTTTTTTCTCTTCTCCTTTCCTCCCTCTCGCTCTCTGCTCTCGCACAGGCGACGGCGCGCGCGGCCGGCGACGGCGGCTCCCGGGTGGCGGCGCGCGGGTTCAGGGCGGCGCGCGGCTACGGCCATCATCACATCTCGACGACGCCGCCATCAGTCGCTGCCATCGGCGATGGCGGCACGCTGCAGTGGGCCATCCAAAACGTCATCCGCGCCAGTGACTACATCACGCTGTTGCACGTCTGCCCGCCAGCGAGGTTGCGCAGCCTACGCCTCGGCGGCTTCCAGTTCGCCCTCGCCTTCAGGGAGCTCTGCAACGGCATCGCGGAGGTAAACCCATCAATCAATGGTGGTAGTTGGCTCAACTCAAAACAAAGAAAGAAGCAAATCATCTTTTTAATTGTGAAATGGTATGCAGGCGAAGTTGGAGATAGTGTTTAGGGAGGGGAAGGTCGGGGAGACGGTGGTGGTAACGGTGAACCAGCTCGCCGCCACCACGCTCGTCGTCGGTCTCCACGACAAGATTCCTCAACTGAACTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA003934