BGIOSGA003960

From RiceWiki
Revision as of 10:59, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA003960| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA003960, complete gene.| tag = OsI_027...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA003960

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA003960, complete gene.

LocusTag

OsI_02789

Ensembl Transcript ID

BGIOSGA003960-TA

Ensembl Protein ID

BGIOSGA003960-PA

Length

1401

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:26847296..26848696

Sequence Coding Region

26847296..26847444,26848429..26848696

Genome Context

<gbrowseImage1> name=IndicaChromosome01:26847296..26848696 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:26847296..26848696 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGGAGGAAGGGCAGCGCGGCGGCTACAGCCGGCTCGCCGGCGATGAGGAGGTGGCTACGGCGAGCGGCGGCGGCGGCGGCGGCGACTACGACGAGCGGAAGCTGAGGCTGCTCGGCTACGAGCCGCAGCTCAAGCGCAACCTCTCGCTGCTGTCCAACTTCGCGGTGTCGTTCTCGATCGTGTCGGTGCTGACGGGGATCACGACGCTGTTCGGGACGGGGCTGCAGTTCGGCGGGCCGGCGACGATGGTGTACGGCTGGCCCATCGCCGGCGCCATGACGCTCGTCGTCGGCCTCGCCATGGCCGAGATCTGCTCCGCCTACCCGACCTCCGGTGGCCTCTACTTCTGGAGCGCCAGGCTCTGCAGCCACCGCCGCTGGGGCCCCTTCGCTTCATGGCTCACCGGCTGGTAA</cdnaseq>

Protein Sequence

<aaseq>MAEEGQRGGYSRLAGDEEVATASGGGGGGDYDERKLRLLGYEPQLKRNLSLLSNFAVSFSIVSVLTGITTLFGTGLQFGGPATMVYGWPIAGAMTLVVGLAMAEICSAYPTSGGLYFWSARLCSHRRWGPFASWLTGW</aaseq>

Gene Sequence

<dnaseqindica>1..149#1134..1401#ATGGCGGAGGAAGGGCAGCGCGGCGGCTACAGCCGGCTCGCCGGCGATGAGGAGGTGGCTACGGCGAGCGGCGGCGGCGGCGGCGGCGACTACGACGAGCGGAAGCTGAGGCTGCTCGGCTACGAGCCGCAGCTCAAGCGCAACCTCTCGTACGTACCCCCTCCTCCTCATCATCCGCCATACTCATCTCGTTCGCGCTCGCTGCGATCCGCGCGGTCGTCGATCCGTTTCGATTCTCGTGGCCGGATCATCCTTCTGAACTTGCGGTTGATCGAGGCGCTGAGATGATTGGATTTGGTCGTGTTTTATGTCGTTGCTTACGTGTTTATTAGTTGTGGTTTCGTGTTGACGCGCGATGGGTAGCTAGTAGTACTTGCTTGCGGGCTTTGTGCGCTTCGCTCCCTATTCCCCAATTATGAAGACACGCACACTTTCTAATGCTGGCAAATGGAGGAATTTAAGTTCAAATTGTGAAACTACTAAGGGCTTCTTTAAAACATACGAATTTCATTGTATTTTCGTAGGAATCAGTTAAGTTTCTGTAAAGTTTCTCTAAACATCCTCAATTCGTAAGGAGACTTAAGAAAAAAAAAAAGAAAGGATACTTAAGAATATCCACTTTTTTTTGGCTGTCACTAGGATGCAGAGTTGCAGACTGTCCTTCCCCAATCTATTGGAGTTTTATACATTATATATTTTCTTAGAGATCACCCTATCCCATTAGCCAAACACTGCCTATATATTTTCTTAGAGATCACAGTAGTATAGTACACATAGAGTTGTTGATCTTTAGTGAGCCCAAAGTAGTTGAGGCCTAGATTTCAAACTCGTCCAACAGGGCCTATCTAAAACCAGGCCTTCTGGCCCATCCCCTTCGGCCCATCAGAAAACAGACCCCTTTTTTTCAGTTTTTTTTTTAAGAAGAAGGGCACTTTTTATATATAGTATATACAGCCTTTTTAAATTGTGATCTTAATTCATATAACCACTAGACTACATGTTCTTTCACAGATCTTTTTATATGCTTTTTTTGCATTCATTTTTTTTAAAAAAAAAAGAGGGAGGAAAAGAAATGAACAAAGGAAACAGGGAATCAGCGAAAGGTGTCACTACTGACAATTTTTGGCGTGCAGGCTGCTGTCCAACTTCGCGGTGTCGTTCTCGATCGTGTCGGTGCTGACGGGGATCACGACGCTGTTCGGGACGGGGCTGCAGTTCGGCGGGCCGGCGACGATGGTGTACGGCTGGCCCATCGCCGGCGCCATGACGCTCGTCGTCGGCCTCGCCATGGCCGAGATCTGCTCCGCCTACCCGACCTCCGGTGGCCTCTACTTCTGGAGCGCCAGGCTCTGCAGCCACCGCCGCTGGGGCCCCTTCGCTTCATGGCTCACCGGCTGGTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA003960