BGIOSGA003971

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Revision as of 10:59, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA003971| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA003971, complete gene.| tag = OsI_028...")
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Gene Name

BGIOSGA003971

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA003971, complete gene.

LocusTag

OsI_02820

Ensembl Transcript ID

BGIOSGA003971-TA

Ensembl Protein ID

BGIOSGA003971-PA

Length

5883

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:27139290..27145172

Sequence Coding Region

27139290..27139349,27140538..27140706,27140820..27141265,27142061..27142084,27142257..27142349
,27143364..27143442,27143537..27143621,27144037..27144148,27144230..27144346
,27145029..27145172

Genome Context

<gbrowseImage1> name=IndicaChromosome01:27139290..27145172 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:27139290..27145172 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGAAGGATGGCCGGGATGGGAAAGTTGCCACTGATGCGGTTGGTGCTGGTGGAGTTGATGAAGCTATTGGTGGGAAATGCACTGTGCTTTGCATTTCAAAGGATGAGAGGAATCGTCAACCTTCCCCCAGGGAACTAGCAATGGCTGATTATATCTTCTACAGGTTTTTTGATGTTAACAGTTGCACACTTTCTGAACAATTACCTGAGAAAATTGCAGGGGTGGAAGGAAATCTTTTGCTTAATTCAAAAGTTGAGCAAGTGACATCCTGTTCAGACCAGGAAGTGCATGGTGTTGATCAGAAGATGCTTAATGTCCCAGTTCCCCTTCCCCAGTCAACGGTTATGGAGGATGAAAGTCCAGTTGCTGCAGTTTCCCTTCCCCCGTCAGTATTCAAGGAGGAAAATGTGGCTTCAGCCATTCCCTTTCCCCAGCCAGTGGTCAAGGAGGAAAGTGCGGCTGCTGCCATTCCCCCTCCCCATGTAGCACTGAAAGAGGAGAGTGTGTCCAAATCTACAGAGAACATTACCAAACCTGCACAGAAAGTTCTCCCTGGGGAGAGGCCACCAAAGAGGGTCAAATTTTCTGAAAATGTTACAGTGCAAAATGTGCCATTAGATGTTCCTGAAAGACCAAGTCGCACTGGACCTTTGGAACTAGCAGGTAGACAAGCTGACAGAAGCAAATGGTTCAAGATTCCATGGGATACCAGACTACGAAATGCTGATGAGCAGGGGACACTTGTGTACATTCAAAATCTTGACATACAGTTTGCAGCTGCTGACATAGAGGAGCTTATACGTGATGCTTTACAACTAAATTGTATCGCTAAGCCTATTAACCACCCAACTTATGATGATCCAAACAATGGAAAAGCATATGCTATATTCAAAACAAAAAGTGCCGCAGACTCTGCTATTTCAAAAATTAATTCAGGCTTGGTGGTCGGTGGAAGACCCCTTTATTGCAGCAAAGGATTGCTTAAGGTTCCAAAACCTTCAGAAACTCTTCTCGGGCACTTAACAATCAACAATATTAGAATGGGTATAAGACAACGAGAAGAACAGAAGAAGGCAGTTTCAACCTCGCATTGTTCTCAACCCAATACAATGGAGTATGATTTGGCCTTGGATTGGATGCTTGTCCGAGCAAAGCAAGAAACGAAATTTAGGACACTTCACAAGCTCCTGAATGCAGCCACCGGCCTCGGTAGGTTAAAAATTGACACCGCAAATTCTGGTGATCGCCTAGTAGGTATTGTTGGTATAGCTAAAGATGATCATGTCTTCGTTTTGGATGCTCTTGGTGAACCATATGCTGGTTCTTGA</cdnaseq>

Protein Sequence

<aaseq>MKDGRDGKVATDAVGAGGVDEAIGGKCTVLCISKDERNRQPSPRELAMADYIFYRFFDVNSCTLSEQLPEKIAGVEGNLLLNSKVEQVTSCSDQEVHGVDQKMLNVPVPLPQSTVMEDESPVAAVSLPPSVFKEENVASAIPFPQPVVKEESAAAAIPPPHVALKEESVSKSTENITKPAQKVLPGERPPKRVKFSENVTVQNVPLDVPERPSRTGPLELAGRQADRSKWFKIPWDTRLRNADEQGTLVYIQNLDIQFAAADIEELIRDALQLNCIAKPINHPTYDDPNNGKAYAIFKTKSAADSAISKINSGLVVGGRPLYCSKGLLKVPKPSETLLGHLTINNIRMGIRQREEQKKAVSTSHCSQPNTMEYDLALDWMLVRAKQETKFRTLHKLLNAATGLGRLKIDTANSGDRLVGIVGIAKDDHVFVLDALGEPYAGS</aaseq>

Gene Sequence

<dnaseqindica>1..60#1249..1417#1531..1976#2772..2795#2968..3060#4075..4153#4248..4332#4748..4859#4941..5057#5740..5883#ATGAAGGATGGCCGGGATGGGAAAGTTGCCACTGATGCGGTTGGTGCTGGTGGAGTTGATGTGGGCGGTGAGACATCAAAATTGATTGATCAAGACTGCATGGCAATACTTGACGTGCTAGCGAGGAGATACAATTTTCGGCGGCGAATGAAATGGATACTCGAGCTTGATGCAGTTGTCAAAATGATTTATCCACCTCACTAGAAATTTCTCTCTCAAAAACCATTACTATTTGTCATGTCATGTATGCCAAACTTTTCCTATTCACTCGCAGAATCGGCGTACGCCGCTGTGGCTCCGTCCCGGAGGCAGAAATAACGCACGCGCCACGCCCACCATCCGCGTCCGTACTGAGACCCAACCACAAAAATCTCACCTCCTCCTCCTCCTCCCTCTCCCACCGCGGCCTCCTCCTGCTACCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCATATATTTTCCCCTTCGTTTTGAATAGGTTTTCTTGAATATCATTTTACCTTATGCTTTCTTGCAGTATATTTAAATATTTTCATTTGATCACTCAAGGACAGATAATCACTATTATGTGAACACTATATCAAATGTGTTTCTAATTGTGAAAAGTCATTGGATGGGCAATAGTGTCGACATTTNGTTAATTCCAAATATCTGTGGTTGAGAAGCCATATCGGTAGCTAGAATCCTAGAGCTACAAGTTACCTTATCAAGTTGTATCTAGTACTAGTTGATGTGAGGAGATCATTTCCCACTTTTTTTTGTTGGGAATCGTCCACCTTGTATTTGTGGTATATTTAGTTATTCACGCATGACATGAATAATTCGAAGTTAGAGTTTTAATTCTCATGTATAAAAAGTGCATCACAATTTTCAAAGAGCAATATTTAAATTCACATTTTTGGAAGTGAAAATGCAGTCCAACTGAGTTAGACAGAGTAGGCATTAGCGTGTTACCCATTTGCATGACCTGAGAAGAGCCAGCTTGGTTGCGACAATCAACTTGAAAATTGAGATCATTTCTAGCTGGTACAGTTAAACATCCTTTTGAGCTAATTGGCATACCATTTTAGTAGAGCATGGTTAGGTATTAACAGTCATGATACAAGATTGAAACTTTCCTGCTATTGTGTATTACCTGTGAATGTTAAGTCATTTGCCTTTTCCATCCTTTTACTTTTTCTGAGAACTAAAATATTATAATACCCTTTTGTTTATTGGTCACCCAGGAAGCTATTGGTGGGAAATGCACTGTGCTTTGCATTTCAAAGGATGAGAGGAATCGTCAACCTTCCCCCAGGGAACTAGCAATGGCTGATTATATCTTCTACAGGTTTTTTGATGTTAACAGTTGCACACTTTCTGAACAATTACCTGAGAAAATTGCAGGGGTGGAAGGTCAGCAATATATCAGATTTCATCAGTGCATTAAATTGCATTTTTAATATGGCAAAAAATTTCTCCACCCTCAGTATCCAAATTGGTATTTAATTATTTTTCTTCTGGCACAGGAAATCTTTTGCTTAATTCAAAAGTTGAGCAAGTGACATCCTGTTCAGACCAGGAAGTGCATGGTGTTGATCAGAAGATGCTTAATGTCCCAGTTCCCCTTCCCCAGTCAACGGTTATGGAGGATGAAAGTCCAGTTGCTGCAGTTTCCCTTCCCCCGTCAGTATTCAAGGAGGAAAATGTGGCTTCAGCCATTCCCTTTCCCCAGCCAGTGGTCAAGGAGGAAAGTGCGGCTGCTGCCATTCCCCCTCCCCATGTAGCACTGAAAGAGGAGAGTGTGTCCAAATCTACAGAGAACATTACCAAACCTGCACAGAAAGTTCTCCCTGGGGAGAGGCCACCAAAGAGGGTCAAATTTTCTGAAAATGTTACAGTGCAAAATGTGCCATTAGATGTTCCTGAAAGACCAAGTCGCACTGGACCTTTGGAACTAGCAGGTAGACAAGCTGTAAGTATCTGAACCAACACTGAGGATACATTTCCACCTTATCAATGAATAGCTTTATGCCATTGATGTTATGATATCATGTTAACCTTTAAACATTCCCCCAGGTAACTCAGTTAATATTATCTCCACAACTCATCTGCATCTAATCTGTTGTTTGTATATAAGTAAAATAAAACAGTTAACCTGGACTGGCCCTGCAATCTTCCCATAAAAAAGGCCAGACCGAGCTCCTGGGCTGATCCCCTGGACCTGTCCAGCACAAGGGACTATATGAGCAGTTGACCTGGGAAAATCTCAGTGCAACTGCTAGTTTTTTTTCCCCACCTGGGCAAGTCATTCTATCCTCTATCGACCAACGGTGCCCCTATGTGGCATTTGGAGTTAGCAAAAATTACATGAAAGGCTGGCCTGGGAACCCAGGAGGCCAGGATGTGGTACTTAAAGCTCTCATGTGAAACCTACTTGTATGCATTCTTAACTAAGGTATAAAGTACTATATGTGCCTCATGCATTCTGATTGTCAATTGAGCAGTTTTGCCGACTGCCCAGTTACCCAATGCATTGAATGGGTTGATTTACGATCTGGGTCTAAGAGCAATGAGTAAAAGGGCCACATGTTCCTTCAATTATTTCTGTTCAAGAATTTTATTCGGCTGAACATCATCTGCTTTTACTATTAAGGTTCAACCAATTTCTAAGAAACAAGCCATAATCAAAATGTTCTGGTTCTACAATTTTCCTACTGATAGCCGTGTTTACTTTTGTGTGCTTACACCCTTTTCTGCTATTTAACAGGACAGAAGCAAATGGTTCAAGATTGTGAGTAATCATTTTTCCTACATTGTCTCTTCTCTCTTGCGTATATACTATGATTGTACAGAAGATTTACATCTATGCTTCATGAGTCAATGCTTCAAAACTATTAGAAAAACAAAAATATTTCAGTTGACCTTATTTGTGGGTGGGTTTACCTTTTAAATGGAAATTTCAGCCATGGGATACCAGACTACGAAATGCTGATGAGCAGGGGACACTTGTGTACATTCAAAATCTTGACATACAGTTTGCAGCTGCTGACATAGAGGTATTGTCTTGTCTATCTGGTTGACATAAAGCCCAAACTGCTTTTTTTATTATATTCTTGGCTTATAATTTATCACTTCTTTACTAGCTTTGCTATGTTCTCTGTTGCACAAACTTTGCGATTTGTTTTCAATGTCTTACACCTCTTAATTTCCACAAGGCCTTGTATATGAGAATTTGTACAGGGAAGGATTTCATATGGCTCGGAAAGAACTCCCGTCCGAGTTTCCCCAGTGCTGTAGATTTCCCTCTTCATGCGATAAACATGACGCTAACTAATAATACTAATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATTGGGCACCACTTCTGAACGGGTGGGCGAATGGATGAGCAAAAGATGCAACAAAGTGGGGATTATCCCGAGTCTAAAGTGTCATTTTTATGTAACCTATTTGTTTTTTTGTTTTCTCTGCTCTATAAAGTAAAAAAAAAAAGATCCACTTTTACTATTTTTCTCTCGATGAGACAATGGTACATGTTTCTCTATTGAGTGCGCCTTTACGTACGCGTTTCCGCTACCCCTAATTGTGAAGATGTAAAATTGGAAAGAATGTAGGGAGCAGTAAAAAAGAGAAATGTTTTGTTTACAGGAACATATTTGATTTTAGAATCTGTTTTAATCTTTTTTGTGCTTTCTGTTTCCTAATTTTTGCCAATTTTCTTGGGCTGGTGTAGTTAACACTTTTGCTATAAAGAGATTAAAAATATTGGTTCTACAACATCACTTTCTACCCCTAATTTCAGTACCTAAGAGAGGTTGAGTAGGTGTACCATACTATTTGATGCTTCCTTGTTCTGCCATACTTGGACAATAACTTCTAAAATGGATACGTGCATGTCCCACTCTCTTAGGTGTCCATGTTTGCTACTTTCTGTGCCTTATCTGCTCTTTTTTCCAGTATCATCAACATACTTAATGAATATTTATCTTGATTACCATGTTTACAGGAGCTTATACGTGATGCTTTACAACTAAATTGTATCGCTAAGCCTATTAACCACCCAACTTATGATGATCCAAACAATGGTGAGTGAGTTTTGTTTGTAATACCTTGCAAGTTTGCCACATTCAGGCAATGTTCTCGAATGCGATTTAAAACAATCTGCTTCCTTGTTTGTAGGAAAAGCATATGCTATATTCAAAACAAAAAGTGCCGCAGACTCTGCTATTTCAAAAATTAATTCAGGCTTGGTGGTCGGTGGAAGGTATCTCACTCTGTTGCTTGCAGATTTGCTGGACGAAATTTACTACTATATATGTGTTCATGTTGCATTTATTGTGCTCTGTTTTAAGTGGGGTCACTGTCTGTTATAGTTCACATGATGGCATATTGTCATCTCATTACAACCCCAACTGCAGAATTAAGAGATCTTTTCTTTAGGAAAGTTAAGGGAAACTTCTATTAGCAATTGGTTGGTTCTATCTTGATACCACCTCAGGGACACATTACCACACTGCAATTGCTTATTAGGCAATTTGTCAACAAAATTGCATGTGATGCCATTTGCACTTGTTACTTACTGTTATTATTTTTCAAATTTCTACCGTGGATTAAATAACAATATGTTGTTCAATATTTTTGGTTGACCCTTTATAATTCTCTTATTGAATTATTTGCAGACCCCTTTATTGCAGCAAAGGATTGCTTAAGGTTCCAAAACCTTCAGAAACTCTTCTCGGGCACTTAACAATCAACAATATTAGAATGGGTATAAGACAACGAGAAGAACAGGTGCTGATGTTGTCCTATGAAGTTTGCTCTATTTCTTTTCTCTGTCTTAATATTTTTGCACAACCATTATTCTTTCTGCAGAAGAAGGCAGTTTCAACCTCGCATTGTTCTCAACCCAATACAATGGAGTATGATTTGGCCTTGGATTGGATGCTTGTCCGAGCAAAGCAAGAAACGAAATTTAGGACACTTCACAAGGTATGTGCACTTCCACTGGAGATCTCTGTGTATACCAGCTTTCAGTTTTATCCATACAGACCTTAAATTTTGAATGCTCAATTTATATCTATAGAAGCATAAAGATGAGAGGAAGACCTTTGCGAGTAAGATGGGAAAGTAAGTGGCTTCCATGGATTTGGTTAAGCGATGGGAACTGTCCTGTTCCGTGCTTATCTTGGAGTCCTCTACTGAGTACTGACTATCATTCCTCGGAGCTTTATGCACTTTTTGCCTGAAGCAACACTTATCTGCGAGCTTTTCTGCTGCGCAAGAATGAAATGCAACGACCATTTGAGGGGGACAACTAACTGCACCACACTGACTCTGCTCATGTTCCGTAGAGCATTATTTTTAGAAAGGAAAGAATTGTGCCATAGCTTAAGAAACCAAAGTAGCATTGGTAGAAGTAGCCCTTGCAGCAAGTTAGGAAAGCCAGAGGCTGTTTTAGGTTACCCCGCACATCAGTTTGATCTCACATGGACACATCAGTTAGATCTGTTGCTCCATGTTAGATAGCAAATCAACGCGTGCCGTCATGAAATGTGTATGTATATATTTTTAAATTCATGACCTGGCTATTAGTTCATTCATGTGACTGCTTATGTGTCTTGAGTTACAAGTTACAACTTGACTCCGTTCCATTTGTGATGATGAACAACAGCTCCTGAATGCAGCCACCGGCCTCGGTAGGTTAAAAATTGACACCGCAAATTCTGGTGATCGCCTAGTAGGTATTGTTGGTATAGCTAAAGATGATCATGTCTTCGTTTTGGATGCTCTTGGTGAACCATATGCTGGTTCTTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA003971

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA003971&oldid=41695"