BGIOSGA003996

From RiceWiki
Revision as of 10:59, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA003996| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA003996, complete gene.| tag = P0686E0...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA003996

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA003996, complete gene.

LocusTag

P0686E09.16

Ensembl Transcript ID

BGIOSGA003996-TA

Ensembl Protein ID

BGIOSGA003996-PA

Length

1137

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:27528973..27530109

Sequence Coding Region

27528973..27530109

Genome Context

<gbrowseImage1> name=IndicaChromosome01:27528973..27530109 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:27528973..27530109 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCCACCGCCGCCGTCTTCTCCGCCTCGGCCTGCCGCCTCCTCTCCACCGTCGCCGGCGGCGCCGGGGCCGGATCCGCCGCCGAGCTCCCCGTCTCGATTGGCCACCTCCGCAGCCTCGCCCGCGCGGGCCGCCTCGCCGACATCGACGCCGCCCTCGCGCCGCACCTGGCGTCCCACTCCGTCGCGGCGGTCTCCGCCCTCTCCTCGGTGGGCCTCCCCGACCGCGCCTCCGCGCTCCTCGCCACCATCCGGAACCCAACCGCCGCGCACCTCAACGCGCTCCTGGCCCCGCTCCTCCGCCGCCACCGCCTCGTGGGCCTCATCCCCACCCTCCTCGCGGCGCACCCCTCCGTCCCGCGCGACGACGCCACGGAGGGCATCCACGCCAAGGCCCTCTGCATCGCCACCGGCGCCGACTCCGCGCTCCACCTCCTCCAGCGGGAGTCGCCGCCGCCGTCCCTCCAGCTCTTCACCAGCGTCATCGACTCCTACTATAAGCAGCGCAAGCCCCACCGCGCCGAGCAGCTGTGGCGCGAGATGGTCGAGGACCACGGCATCGTCCCCGACGCCGCCGCCCACAACGTCAGGATCACCTACAAGGCCGCCACCGGCACGGTGGAGGAGGTCAAGGAGCTGATCCGCGCCATGCGCGAGGACGCCGGCCTCCAGCCGGACATCGTCTCCCACAACGGGCTGATGCGCGCGATGGCGCGGCACGGGAGGGTGGACGAGATGATGGAGGTGTACAAGAGGCTGGAGAAGGGTAGCGCCTCCGCCGCGGCGGAGGGCAAGTCGGCGCCGGACTGCGCGACGTACACCTGCGTGGTGGCCGCGCTGTGCAAGGCGGGGCGGTGGTCGGAGGCGGACGACGTGTTCTACGAGGCGGTGAAGCGGAGGAAGCTGGCCGACCTCGGGACGGCGCGCGTTCTGGTGCGAGGCCTCAAGGAGGCCGGCAAGGGGCGGGCGGCGAGGCGGGTGGTGATCGGGCTGCGCAAGAAGTTCCCCGACCGCTTCGACGGCCCGTGGAAGGATCTCGAGGAGTTGGCCGGGATCGCCGGCGAGGATGAGGAGGGCGATGTCGAAGGGGAGGACGACGAGCAGCCGCCGGCGACGACGACGACCACTGCCGCGTGA</cdnaseq>

Protein Sequence

<aaseq>MATAAVFSASACRLLSTVAGGAGAGSAAELPVSIGHLRSLARAGRLADIDAALAPHLASHSVAAVSALSSVGLPDRASALLATIRNPTAAHLNALLAPLLRRHRLVGLIPTLLAAHPSVPRDDATEGIHAKALCIATGADSALHLLQRESPPPSLQLFTSVIDSYYKQRKPHRAEQLWREMVEDHGIVPDAAAHNVRITYKAATGTVEEVKELIRAMREDAGLQPDIVSHNGLMRAMARHGRVDEMMEVYKRLEKGSASAAAEGKSAPDCATYTCVVAALCKAGRWSEADDVFYEAVKRRKLADLGTARVLVRGLKEAGKGRAARRVVIGLRKKFPDRFDGPWKDLEELAGIAGEDEEGDVEGEDDEQPPATTTTTAA</aaseq>

Gene Sequence

<dnaseqindica>1..1137#ATGGCCACCGCCGCCGTCTTCTCCGCCTCGGCCTGCCGCCTCCTCTCCACCGTCGCCGGCGGCGCCGGGGCCGGATCCGCCGCCGAGCTCCCCGTCTCGATTGGCCACCTCCGCAGCCTCGCCCGCGCGGGCCGCCTCGCCGACATCGACGCCGCCCTCGCGCCGCACCTGGCGTCCCACTCCGTCGCGGCGGTCTCCGCCCTCTCCTCGGTGGGCCTCCCCGACCGCGCCTCCGCGCTCCTCGCCACCATCCGGAACCCAACCGCCGCGCACCTCAACGCGCTCCTGGCCCCGCTCCTCCGCCGCCACCGCCTCGTGGGCCTCATCCCCACCCTCCTCGCGGCGCACCCCTCCGTCCCGCGCGACGACGCCACGGAGGGCATCCACGCCAAGGCCCTCTGCATCGCCACCGGCGCCGACTCCGCGCTCCACCTCCTCCAGCGGGAGTCGCCGCCGCCGTCCCTCCAGCTCTTCACCAGCGTCATCGACTCCTACTATAAGCAGCGCAAGCCCCACCGCGCCGAGCAGCTGTGGCGCGAGATGGTCGAGGACCACGGCATCGTCCCCGACGCCGCCGCCCACAACGTCAGGATCACCTACAAGGCCGCCACCGGCACGGTGGAGGAGGTCAAGGAGCTGATCCGCGCCATGCGCGAGGACGCCGGCCTCCAGCCGGACATCGTCTCCCACAACGGGCTGATGCGCGCGATGGCGCGGCACGGGAGGGTGGACGAGATGATGGAGGTGTACAAGAGGCTGGAGAAGGGTAGCGCCTCCGCCGCGGCGGAGGGCAAGTCGGCGCCGGACTGCGCGACGTACACCTGCGTGGTGGCCGCGCTGTGCAAGGCGGGGCGGTGGTCGGAGGCGGACGACGTGTTCTACGAGGCGGTGAAGCGGAGGAAGCTGGCCGACCTCGGGACGGCGCGCGTTCTGGTGCGAGGCCTCAAGGAGGCCGGCAAGGGGCGGGCGGCGAGGCGGGTGGTGATCGGGCTGCGCAAGAAGTTCCCCGACCGCTTCGACGGCCCGTGGAAGGATCTCGAGGAGTTGGCCGGGATCGCCGGCGAGGATGAGGAGGGCGATGTCGAAGGGGAGGACGACGAGCAGCCGCCGGCGACGACGACGACCACTGCCGCGTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA003996