BGIOSGA004000

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Revision as of 10:59, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA004000| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA004000, complete gene.| tag = OS01G06...")
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Gene Name

BGIOSGA004000

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA004000, complete gene.

LocusTag

OS01G0617900

Ensembl Transcript ID

BGIOSGA004000-TA

Ensembl Protein ID

BGIOSGA004000-PA

Length

2309

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:27624752..27627060

Sequence Coding Region

27624752..27625037,27625393..27625513,27625608..27625657,27625778..27625845,27626074..27626172
,27626263..27626322,27626438..27626497,27626650..27626704,27626792..27626841
,27626962..27627060

Genome Context

<gbrowseImage1> name=IndicaChromosome01:27624752..27627060 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:27624752..27627060 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGGCAGCTGCTCTTCTCTCCCCTCCTCCCTCTCCCTCTCCCTCCCCCACCCCGTCCTCGCTCCACCCCAGGCAAGCCCTCCGCTTCGCGGTTGGCACAGGAGGAGGAGGGCGCGCGCGCGCCACGTCGACGGGGACGAGACGCCGCGCGGCGCTCGTCCCGTGCTCCTCCAGCGTGAGCGCGCGCGGCCCCGCTTCGAGAGGCGACGGGTTGGCCCTGGAGAGGAGGCGCCTGCTGCTGTCCGGCCTCGTGTCTTCGTTCGTGCTCGTCCTCCCGGTTTCAGATTCGCATGCTGTTGCCGAGATGGATGAAGATGTGAAAATGGCTACGCTAGTTGACCCGATCAATGCATATTCTTTTCTTTACCCAGTTGAATTGCCAGGAAAGAAATTCACATTCAAATGGGTAGAATCCAGAAAACCAGAACGATATTCCTCTGCTGCACCACTATCTCCTGATGCACGGCAACGTATTGTATCGGAGCGAGTTGACATGATACATAACGTTGTCATCTCAGTCTCGATTGGGCCGCCAAATTCACGTTTTCCGCCTTCCAAGGACAAGAGCAAGTGGGATCCAAAAGATGTTGCTGATTGGATTTTGGCTGAAAAATCTTCACTGAAGGTGACGACAGGCCAACGCATGACAGAGAGTTCTGTCCTTGATGCACACTCTTCAGATGTCGATGGAGAACCATACTGGTACTATGAGTATCTAGTTCGGAAATCTCCTACACAATCTGCACCAGAACCAAATCTGTTTCGCCATAACGTAGCCTGCACTGCTGAACGAGATGGTTACTTGTACTCCTTGAATGCTTCAACACTCAGCAAGCAGTGGGAATCTATGGGGCCTTCTTTACAGAAAACAGTGGCATCCTTTCACCTCCTACCCCCTACAGAAAATTATGTTCCTCCATACCAGGATCCATGGAGATTTTGGTGA</cdnaseq>

Protein Sequence

<aaseq>MAAAALLSPPPSPSPSPTPSSLHPRQALRFAVGTGGGGRARATSTGTRRRAALVPCSSSVSARGPASRGDGLALERRRLLLSGLVSSFVLVLPVSDSHAVAEMDEDVKMATLVDPINAYSFLYPVELPGKKFTFKWVESRKPERYSSAAPLSPDARQRIVSERVDMIHNVVISVSIGPPNSRFPPSKDKSKWDPKDVADWILAEKSSLKVTTGQRMTESSVLDAHSSDVDGEPYWYYEYLVRKSPTQSAPEPNLFRHNVACTAERDGYLYSLNASTLSKQWESMGPSLQKTVASFHLLPPTENYVPPYQDPWRFW</aaseq>

Gene Sequence

<dnaseqindica>1..286#642..762#857..906#1027..1094#1323..1421#1512..1571#1687..1746#1899..1953#2041..2090#2211..2309#ATGGCGGCAGCTGCTCTTCTCTCCCCTCCTCCCTCTCCCTCTCCCTCCCCCACCCCGTCCTCGCTCCACCCCAGGCAAGCCCTCCGCTTCGCGGTTGGCACAGGAGGAGGAGGGCGCGCGCGCGCCACGTCGACGGGGACGAGACGCCGCGCGGCGCTCGTCCCGTGCTCCTCCAGCGTGAGCGCGCGCGGCCCCGCTTCGAGAGGCGACGGGTTGGCCCTGGAGAGGAGGCGCCTGCTGCTGTCCGGCCTCGTGTCTTCGTTCGTGCTCGTCCTCCCGGTTTCAGGTGAGCGGAATCGAAATCGACGAGCTGTGGCTTCTACTTTACTTTTTGCCTCTCGACCGTGAATGGAAACTGTTAATTGTGGGCATGTTTAATCTCCGTTTAACTCGTATTACGTGACTGATGATCTGTCTAAGTGTGGCAATTTTAGGGCATATCATTTCTAAATTTCAGAGTGAAATTGTGAGCTGTATTATCATTTTTCTGAAACTGAACTATTTAGAATGGAGTACTATGGATGATGGGCTCATGGGCATGTGCCACCTGCTGTTCTCTTTCTACTCCGTATTTCATTATCCAGTTTGTACTTTGTATGTGTTGGTGAGTACATTGCTGATGAGTCATGATGATTCTGTAGATTCGCATGCTGTTGCCGAGATGGATGAAGATGTGAAAATGGCTACGCTAGTTGACCCGATCAATGCATATTCTTTTCTTTACCCAGTTGAATTGCCAGGAAAGAAATTCACATTCAAATGGTACTGCAATTTAAAAAATTCTCTGTTCTCCCCGCGAGGCTAATTTTGTTGTTTTGCCATTCTGAATGGAACTTGCTATATATTCTGTTTCCAGGGTAGAATCCAGAAAACCAGAACGATATTCCTCTGCTGCACCACTATCTCGTGAGTAGCCTCTGGTATAACAATAATTCGCAATGTTTCTTTTGCCTTGTTGAGCGCAAGATCTTCCAAATTTCGCATTCTTTATGGTTCATGATAAAAGCTGACTGGAACTTTATACAGCTGATGCACGGCAACGTATTGTATCGGAGCGAGTTGACATGATACATAACGTTGTCATCTCAGTCTCGGTAATTCTTCAAATACTATCCAGTACTAGAAACTGTATAGATTTGCAATGTGCTAGGTTTATACCGATTCAATTGAATTCCGTGGGTAGTTACGATCACAATGTTACCATTTGGCGCAAACTGTCATGTTACGAAACTATCAGTAGGGATCACACCAGTTAAACTGTAACGGTGCAATAAATATATCAGCATAGTAATGTACTAATGTGCATCATTTGACTGGTGCAGATTGGGCCGCCAAATTCACGTTTTCCGCCTTCCAAGGACAAGAGCAAGTGGGATCCAAAAGATGTTGCTGATTGGATTTTGGCTGAAAAATCTTCACTGGTAATTTCTTGTGTTCATGTAAAGGACAATTGCGATTGTGGCTTTGCATGATCCCTATTTATTTCTATAACAAACTGTATCCCATTGCAGAAGGTGACGACAGGCCAACGCATGACAGAGAGTTCTGTCCTTGATGCACACTCTTCAGATGTAAGTTTGATCAGTTTTGCCTATTACCTCTATCCTCATGATACAATTATTCTTCCAAAATAGATTTTGTTTCCTGCAATTGAATGCATCTATACATCTTGAATTTTATTTGTAGGTCGATGGAGAACCATACTGGTACTATGAGTATCTAGTTCGGAAATCTCCTACACAATCTGTAAGTTTCTGGGATGTATACATCTGTAAATAAATGTAGGGACATACAATACAAACTCACAAAGGCAATACAGATAAACTTTTCCTGTTATTGTAGTATTAACAGATTGACAATCAGATAAGTGTTCCTAATGATTACATTTGTTTCTTCAGGCACCAGAACCAAATCTGTTTCGCCATAACGTAGCCTGCACTGCTGAACGAGATGGTATCATTTCATTTTTCTAATTTTGATCATTCACTTCATCCATACATTTGAAGGATTGTTCTGTTCACTCTCCTTTTCTTTGATTAGGTTACTTGTACTCCTTGAATGCTTCAACACTCAGCAAGCAGTGGGAATCTGTGAGTTTTGCATGCCCTGGTGTTTGATTTCATTATCGTTGTTGCAGTTACAGGAGGAACATGTTCTGAGACTGTTTTTTGTTTAGATTCTGATCAATTAATCAAATGTTTGCTACGCAGATGGGGCCTTCTTTACAGAAAACAGTGGCATCCTTTCACCTCCTACCCCCTACAGAAAATTATGTTCCTCCATACCAGGATCCATGGAGATTTTGGTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA004000