BGIOSGA004107

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Revision as of 11:01, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA004107| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA004107, complete gene.| tag = OJ1316_...")
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Gene Name

BGIOSGA004107

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA004107, complete gene.

LocusTag

OJ1316_H05.26

Ensembl Transcript ID

BGIOSGA004107-TA

Ensembl Protein ID

BGIOSGA004107-PA

Length

5830

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:29395422..29401251

Sequence Coding Region

29395422..29395520,29396173..29396277,29396360..29396466,29397191..29397345,29397866..29397954
,29398079..29398601,29399294..29399368,29399528..29399748,29400383..29400465
,29400552..29400663,29400932..29401006,29401072..29401251

Genome Context

<gbrowseImage1> name=IndicaChromosome01:29395422..29401251 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:29395422..29401251 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGGGCGACAAGACGGCGGCGCCCCCTCCGCCAGACGCGGCCGCCTTCTCCCCCGACGGCGAGCTCTTCGCTGCCGTCTCCGATCGGCTAGTCCAGGTATGGCGTACAGGAGGAGGAGAAATAATAGAAGGATGGACTGATCCAATTTCAGCCCCAGATGATTCATACAGTTGTATTGCATGTTGCTCTGTTCAGAAAAAGCATAAAAAGGATGGAAACCTTATTCTTGTTGCTGTTGGTACTACAAATGGTCAAGTTTTAGTTCTCGATTCTACTGGTGTCATATGGAAGAATGCTCCTCATACTTGCAAGGTTGTTTCTCTTCATTTTGCAAGACATGGGCGTGTTCTTTATACTGCTGGCATGGATGGAATTATATGTGAATTGAATTCTCGCACCGGGGAATCCAAAGACACTATTAAAGCTACGAAGAAACCAATTAATTCTTTTACACTTTCTCATGATGAGAAGTTTATGGGTGTATCAAGTAAGATAACAAGATTATTTAGTGTGAGTGAGAAAAAAGAGATCTTGAGGATTCCTTCTGATGTTGGTCCTGTCCAGCTGATGTCTGTATCAGATGATGGACGTTTTTTGGTTTCTCATGTTGACAATAATAAGGAAGTGCAAGTGTGGTCTTGCGATCAGAATAGTTGTACCATCGTTTCTACAGCCTCCCTTACAATGCAAAATCAGCCAAAGATAGTAGAGTGTACAAGGAGCACATCATATGGAGATGGGGGCATTGTTCTCGCAGTATCGAAGAAAGGTGTTGCTCATGTCTGGCATTTACAGACCCTCTCCCAAAATGAAGTACTGCCCACAAAAATCTCAGTCAAAAATTCACTCGATAAAAAAGGCCGTATCCCAATAATTTCAGCTAAATTATGTGACACCAATGAAGACAATACTGTTAAGGTTCATGTTGTATTTGGATCACCAAACTTTTTACAGTTCAAGGTTGTAGAATTGGATGATACTTGCAAGGACATCAACTTGGTTGCAGAGTATGATGAACTAGCTAAACAAGATATGGTGTCTCCGCAGGAAAGGAATTTGGAGCAAGAAGCTAAAGCAAATAGCAAGGATGCAGAACCTGTTCAAGGAAAAGCAAAGAAAAGGACATCATCCGTTTTGGATTCCACTAATGACACAACCAAGGAAGTGAATCCAGAGTACAATCTTGATGAACCGACCATGGAGGAAAAACTTGCAAGTCTGAATTTGCTAAACAAGTCTGAAATTACTGAAGAGCAACCACCCTCTTTAGCGCCACCAAGTGCAGATTCAGTCCATGTTTTGCTGAAGCAAGCTTTGCGTGCTGATGATCACACTGAATTGCTAAAATGCTTGTACAATAGAGATGAAAAGGTCATTGTAAAGTCAGTATCACTCCTAACACCGGCAGACGTCGTTAAGCTTCTCAAGTTCTTTGTATTGCTAATACAATCCAGGGGTGCAAAACTGGTTTGTATGCTCCCATGGCTTCAGGCTTTACTTTGTCGGCACATGAGCAGCATAGTGTCTCAGGAATCTTCTCTACTGTTGCTAAACTCACTCTATCAGCTTATTGATGCAAGAACATCAACCTTCAAGTCAGCACTTCAACTTTCAACTACCCTAGACTATCTTTTCAGCGGGGTTTCTGACGGTGAAACTGATGAGGAGGACGCTGTTCCACCGATAATATACGAGGACAAGGACACAGACGATGAAGAATCTGAAGTTGATGCTATGGAAACTGACGAGGAGAGCCAAGAGCTGGGAGACGTTACTGATGCCTCTGAGCATTCAGATGGGAGTGATATCATGACCGACTGA</cdnaseq>

Protein Sequence

<aaseq>MAGDKTAAPPPPDAAAFSPDGELFAAVSDRLVQVWRTGGGEIIEGWTDPISAPDDSYSCIACCSVQKKHKKDGNLILVAVGTTNGQVLVLDSTGVIWKNAPHTCKVVSLHFARHGRVLYTAGMDGIICELNSRTGESKDTIKATKKPINSFTLSHDEKFMGVSSKITRLFSVSEKKEILRIPSDVGPVQLMSVSDDGRFLVSHVDNNKEVQVWSCDQNSCTIVSTASLTMQNQPKIVECTRSTSYGDGGIVLAVSKKGVAHVWHLQTLSQNEVLPTKISVKNSLDKKGRIPIISAKLCDTNEDNTVKVHVVFGSPNFLQFKVVELDDTCKDINLVAEYDELAKQDMVSPQERNLEQEAKANSKDAEPVQGKAKKRTSSVLDSTNDTTKEVNPEYNLDEPTMEEKLASLNLLNKSEITEEQPPSLAPPSADSVHVLLKQALRADDHTELLKCLYNRDEKVIVKSVSLLTPADVVKLLKFFVLLIQSRGAKLVCMLPWLQALLCRHMSSIVSQESSLLLLNSLYQLIDARTSTFKSALQLSTTLDYLFSGVSDGETDEEDAVPPIIYEDKDTDDEESEVDAMETDEESQELGDVTDASEHSDGSDIMTD</aaseq>

Gene Sequence

<dnaseqindica>1..99#752..856#939..1045#1770..1924#2445..2533#2658..3180#3873..3947#4107..4327#4962..5044#5131..5242#5511..5585#5651..5830#ATGGCGGGCGACAAGACGGCGGCGCCCCCTCCGCCAGACGCGGCCGCCTTCTCCCCCGACGGCGAGCTCTTCGCTGCCGTCTCCGATCGGCTAGTCCAGGTCCTCGCTCGGAACCCGTCACCTGAATCCCCCCTTCCTTACGCGCTGTTCCCCTCGTCCTTCGGTCGTTGTTGATTAGGGGGGAATACTTCCGCTGCTGGAGCGTTATACGGTCGCTGCGCTACGATGTAGTAGTGTGCTTTTGGTTTTCGAGATGTCTCGTGGCTCGCGAGTGATTGCTGTATGGTTGGGGAACTAGGTTCGAACGCTTGCTCTCTCACGGCGATTAAATAGGGGAGTTTGGTGAAGTTGGTTTTTGTTTCTTCCGGGTGAAGTGCTGCTTGGTTGTAGGCAATAGTTTTCATGATGTATCACTATTTAAATACGTTGGGCGTCTACCTCAAGACTCAAGAGTATATAATTTTGCTTATAAGCTGTTTGTAGAGAGTGATAGAAGTTAAAAGCTGAGATCTGTGAATGGTAGATAGCCTATCTATTTTAGAAATGGTACTTCGGAGAGGTGAAAGTCTACTACTACTAACAAAAAGAGGGTGAAAAGTTGAGCTTTACATGATGGAGGAAATTCGGATGGATATGTGTTTAGCATTAAAATCTTTCCTTCGCTCAAAACATCAATCCAAATTGTGAGATTGTAGCTTTGATGTATGCTAACCTATCCATTTTTTCTGCTTGTGCTTTTCTAATTGAGAAGGTATGGCGTACAGGAGGAGGAGAAATAATAGAAGGATGGACTGATCCAATTTCAGCCCCAGATGATTCATACAGTTGTATTGCATGTTGCTCTGTTCAGAAAAAGGTAATTTTTTAGGATTGAAATTAGGCTCTGTCTCATTTCTGTCTTACAATTTGCTGTTTTTGATTGGGTATTTTTTTTGTAGCATAAAAAGGATGGAAACCTTATTCTTGTTGCTGTTGGTACTACAAATGGTCAAGTTTTAGTTCTCGATTCTACTGGTGTCATATGGAAGAATGCTCCTCATACTTGGTAGGTGCAATCTTATTATGATCTATGAGCTTGATGTTCTTGACCTTTAACTTGACTGATAGGGGTTCTTCTGCAATGTTCTGAATTTCGTTTAGTACTTCTAATTCAAACTAGAATGTTTGGCATTTTGAAACAAGGAGTTTGGCCATTTCTCCCTTCGATATAAACATACATAACATTCAGTACTTTGTTCCCCTACTTAACTGCGCTGTAGGCTTATCACGTGTACTATGCTATATCTTAGTCATTGCTTAAAAGTTAAAACAATATTTGAACTTACAAGTATTTTTTTTAATCTAAATGGCTGGTTCTGCATGGATATGCTGCTCTCTGCCGGGAAAAAAAAAACTTCTTTTGGCGTATTTGTTGTAGCTCAAGACTCAGTTTCTTTCTTTCCTTCTGTGCTTGAAGCTCAAGCTTCAATTTATCACCTAAATGGAAGAGTTGTAATTTTTCCTGTTTAACTAAATAACGAGATATTCATATTGGAACACACTTAAGCAGGCAACATGAGCTTAATTGGATTATTACAAGCATCCCATGGCCTGTAAACCAAATTTTTGACAAGCCATTCTGATGATTTATGTTATGAGCCAACTTGCCTCTGAAGAAAAGAGTCATAGTCTGTGCTGCAGAACAAAACAAGTTAGATCAATATGTCTCTGGTGTAACTTTATTGTGAAAATTCCATGCCTACCTTAACATGCTTTCCTTTTTCTACTAGCAAGGTTGTTTCTCTTCATTTTGCAAGACATGGGCGTGTTCTTTATACTGCTGGCATGGATGGAATTATATGTGAATTGAATTCTCGCACCGGGGAATCCAAAGACACTATTAAAGCTACGAAGAAACCAATTAATTCTTTTACACTTTCTCATGGTGAGCGCAACTTTAATTTCATCTGTTCACCTGATGCATGCTTGAAAAAACCTTTATTAAAATCCAGTCTTCCGGATGTTTATTATGTTAATAGAAGGTTTTTACCAAAAATGGATGGCTTGTTTTTGATGTATCATGAAGTGGAAAATTCATTTCTAATTATTTGTTGATCTTAACATGTAGTAGTGTAGTAGCTGATAGTGATAGAGCATGACAACACATATGCAATTGCCAGGTAAAAAAAAAACAATTTTTCATGTACCAATTATTTTATATGGGATATCAAGAACATACGGAGCTGGCAGAACACTAATTCTTTTAATCTCTTTCGCATCTTTCGATTATTAATTGCCAATCGGGTAGTTCAAATGAAATTTAGTTTACATAACCCAGGGTTTCAGCAAAATGAGTTGAATGTGAACTCTTTCTTTGATATGACATCTTATGTTATTATTGCCAATTTCTTTCTTTGTCATTTCTTTGTGTATCTCAACTAAACTTTTGGCATTGTATTTTGCAGATGAGAAGTTTATGGGTGTATCAAGTAAGATAACAAGATTATTTAGTGTGAGTGAGAAAAAAGAGATCTTGAGGATTCCTTCTGATGTTGTATGTCATTATCTCAAACTTGCGCTCCTCTCTCCCTGTTGATACACCCCACGAGATGAATTTGTAATATGTCATGTACTCAATAGAGGCTTTCAACTCTTATTGATGCTATTGTCAAATGCAGGGTCCTGTCCAGCTGATGTCTGTATCAGATGATGGACGTTTTTTGGTTTCTCATGTTGACAATAATAAGGAAGTGCAAGTGTGGTCTTGCGATCAGAATAGTTGTACCATCGTTTCTACAGCCTCCCTTACAATGCAAAATCAGCCAAAGATAGTAGAGTGTACAAGGAGCACATCATATGGAGATGGGGGCATTGTTCTCGCAGTATCGAAGAAAGGTGTTGCTCATGTCTGGCATTTACAGACCCTCTCCCAAAATGAAGTACTGCCCACAAAAATCTCAGTCAAAAATTCACTCGATAAAAAAGGCCGTATCCCAATAATTTCAGCTAAATTATGTGACACCAATGAAGACAATACTGTTAAGGTTCATGTTGTATTTGGATCACCAAACTTTTTACAGTTCAAGGTTGTAGAATTGGATGATACTTGCAAGGACATCAACTTGGTTGCAGAGTATGATGAACTAGCTAAACAAGATATGGTGTCTCCGCAGGAAAGGAATTTGGAGCAAGAAGCTAAAGGTTTGTTGTTGTATCTGCCTGCTGCTCTTATAATCATTATCAGTGCAGTAAATTGAATAGTTAAGTGTGTTAGAATTATCCTGGTATAAATAACCCGGTTTGCATAATGGAAAAGGCATGCCATCATTCTTGAGCTGCTTTGTACTGTTGCTGGTTCCTATATATCTGCAATAAGTTCTTATTTCAAAAATGTTCTCAATTGTTAAACAGAACATTGAGCTTTAGTTAGTCAAAACACGGTTAGATTTAGGACTGATCTACTTGATCCGCGTTGTTCTTTTTCACAATTTTTCCAGATCGCTCTGCTTGAACCTTGTTTTAGTTTTCTCTGCAATGACAAGAACTGTTGTTTCTTCCTGTTCAGATGAATTCCAATCCAGACAGCAGCTTGTCTGCTCTTAACTAATGGATAATGATTTGGATTAATCAACTAGCCAAGAGATCGAAGTAATGTAGATGTTATTTATGACTAGTGCCTAGTGGTGCACTCCACCAAGCACTAATGGCATGTATGTAGTTTCATTTCAGCCATCCACTAGTTTAATGCTAACTTCATATCGTGCACCTTTCGAACTGATAAAAAATCTATTGGAATTGCTCTCCATAATTACCCTCCACTATATGGTATGATAATCAAGTTGCAAATTATATACTTTGTCTAGATGCCTGACATTGATTATTTCTTTGCCCAGCAAATAGCAAGGATGCAGAACCTGTTCAAGGAAAAGCAAAGAAAAGGACATCATCCGTTTTGGATTCCACTAATGGTGAGACATTGCTTGTTACATTACCTCCAAAACCTTACACTAACATTTTCTTTTACCTTTTCTACCTCTAAATAGTGAAAGGACAGAATTAAGGGTGCCCTCTATATTGTTTTTTTTATTACCACATCACTAATTTTTGTTTTTATTTGGGATGTTTAGACACAACCAAGGAAGTGAATCCAGAGTACAATCTTGATGAACCGACCATGGAGGAAAAACTTGCAAGTCTGAATTTGCTAAACAAGTCTGAAATTACTGAAGAGCAACCACCCTCTTTAGCGCCACCAAGTGCAGATTCAGTCCATGTTTTGCTGAAGCAAGCTTTGCGTGCTGATGATCACACTGAATTGCTAAAATGCTTGTACAATAGAGATGAAAAGGTATGGCTCCGTTTTTTCCTGTGCACTGTGTGGTTGAGACTTCTGTCGCCCCTTATCTTCACTCAATCATTTTTCATATTTTGAAAACAGTCTCACTTAGAATCTTATTCTGCTTTCAATTTTTCCGTATAATTCATCATTTTTATTTGGCTCAGACAAGGTAGTTGACGTTACAATAATTTGATTTTGGATGTTTGTTTTACTGGGCTATGATGGTTATGTACATGATTAGGAAAACATGTAGAACAAGACATGATTACGCTTGGCTATGTCAAACTTAGGCTATGGTTACTTGTATTCTTATTTCTTATTATTGCCATTTTTAATGATATTTCACATAGCAAGTAAAATTGAAAATAAAAAGAAGGGTAGCCCAGAATGAAAGAAAAGACAAAGTAGTCTGAACCTCTTAATCCAGTCTTGTTGGACTGCTTTGTAAGTTGCAATTAAACTTGGTTAGCCTAATTTACTAAACTAAAAACTGGCCTCCTTTTCTCCATGAGGCCATAACCAATCTAATAGTATTCATTCCTAGCAGCAGTCTTCCAATGCATTGATATGAATTTTCCTGTTGCAATTTCATGGAACATTTCCTCTTGTCTGATAATTGTATTGTTGGCTGGGTTACATCCAGGTCATTGTAAAGTCAGTATCACTCCTAACACCGGCAGACGTCGTTAAGCTTCTCAAGTTCTTTGTATTGCTAATACAATCCAGGTAGGTTTTCTGTTAGTGTAAATCTCTAATATTTCCATTACAATTTGGTGGAAAGGTTGCACATGATATGTTTTTCCTCTCCACAGGGGTGCAAAACTGGTTTGTATGCTCCCATGGCTTCAGGCTTTACTTTGTCGGCACATGAGCAGCATAGTGTCTCAGGAATCTTCTCTACTGTTGCTAAACTCACTCTATCAGGTTAGTACCATCTTCTGCTGCAGTTGCAGTAACAGTAAGTGGCATGGCATCATCTATACTGGATTATGCTTTTTCTGATTAAGATTATTAGATTACTAGTTTGCATCGTTCCTGAACAATGCTGCATTTAGATGTCATGTGTCAGGAATTTTTTGAAGTTTTGACTTCCTTGATTATCAAATTTTTAGGGCACAAGCACAGACAGGAATGGCAATTGTGAGTCAGGTTGAGTTCTGAATACTAATGTTACTATCTGCCAATTTTGCAGCTTATTGATGCAAGAACATCAACCTTCAAGTCAGCACTTCAACTTTCAACTACCCTAGACTATCTTTTCAGCGGGGTAAGTTTCTTTCCTCCAAATGGCGCGGTCTTTTTAATCACTGCAGTAACTCAAAACTTTTCCAGGTTTCTGACGGTGAAACTGATGAGGAGGACGCTGTTCCACCGATAATATACGAGGACAAGGACACAGACGATGAAGAATCTGAAGTTGATGCTATGGAAACTGACGAGGAGAGCCAAGAGCTGGGAGACGTTACTGATGCCTCTGAGCATTCAGATGGGAGTGATATCATGACCGACTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA004107

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA004107&oldid=41831"