BGIOSGA004124

From RiceWiki
Revision as of 11:01, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA004124| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA004124, complete gene.| tag = OS01G06...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA004124

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA004124, complete gene.

LocusTag

OS01G0652000

Ensembl Transcript ID

BGIOSGA004124-TA

Ensembl Protein ID

BGIOSGA004124-PA

Length

4372

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:29544894..29549265

Sequence Coding Region

29544894..29546027,29546451..29546576,29546837..29546968,29547063..29547244,29547310..29547472
,29548871..29549005,29549131..29549265

Genome Context

<gbrowseImage1> name=IndicaChromosome01:29544894..29549265 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:29544894..29549265 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGTGGCCGGCCGCGTCAAGGCGGCCATGGGCTTCCAGCGCAGCCCCAAGGTGTCCAAGTCGCCGGCTCACGTCGGGCGGACGCCGGAGACTCCTGGCCGGGGGTCATCGTCTGGCTCCCCGGCGCCGGGCGGCTCGGCGTCCAAGGCTGTCTCCTTCGCGCGGTCCTTAGGCGTGCACTTCCCGCGCTCGTCGGCTCAGGTGCAGCCGGCGCGCGCCCCGCCGGAGGTCGCCGACCTGCTGCGCGCCATCGAGCAGCTCCAAGAGAGGGAGTCGCGCCTCCGCGTGGAGTTGCTGGAGCAGAAGATCCTGAAGGAGACCGTCGCCATCGTCCCATTCTTGGAGGCTGAGCTCGCCGCGAAGAGCAGCGAGCTGGAGAAATGCAAGGACACCGCCGCGCGACTGGAGTCCGAGAACATGCGGCTGTGCGCGGAGCTCGACGCTGCCGTGCTGGAGGTGACGAGTAGGAAACAGAGGATTGTTCACATGGAGAAGGAAATGGCGGAGCTGAAGAAGCAACAGGAGGCTGCCGCTGCTGACGCTGACGACTGCTCGTCCACGGCTTCGGTCTCACACGAGCAACCCGAGAGCGCCAGTTCCGCAGCCAATCCCGCGAGTCTAGTTCAACGTGGACCGCCCATTCCACCGCCCCCGCCGCCAGTGCCACCGGCGGCATTCAAGTCCAAGTCCTACTCTGCCTCGTCGCGCGTGTCGCTTCCGAGTACTTCGGCGCCCTCGCCATCTTCTTCCACCTCGACTTCACCAACGTACTCCTGCTCGTCGTCAGACACCGTGACCACGCCAAGAAACCGAAAACCAGAGCTCTCGAAGCTACCGCCCATACCTCCGCCACCACCAATGCCAGCACTCAGCGTTTGCGGCCGCGCAGCCGCGCCACCTCCTCCTCCGCCGCCTCCTCCGGCTCGGAGAACGTCGGGGGCAGCTTCGCCGGCTGCGTCGGGACCGCGCGTGACGAGAGTGCCCGAGGTGGTAGAGTTCTACCACTCACTGATGCGGAGGGATTCAAGATCAAGGGACGGGAGCGGCGGAGGCGAAACCGCCAACGGCGGCGGAGTGGCCGCGACGAGGGACATGATCGGCGAAATCGAGAATCGTTCGGCTCACCTCCTCGCGGACGAGAGTTTGGTGGCGGTGCTGACAGGAACAGCTGCATGCGCGGAGTCCGGAGAGTACGTGTCAGATTGGCACCGTGGGGCCAGGTGCAAACGCAGTGAATGTGGCATTCAAAGCGTGGTACCGATCAAATCGGACGTGGAGAGGCAGGGCGACTTCATCCGGTTCCTGATCAAGGAGGTGGAGGGCGCGGCGTTCGTCGACATCGAGGACGTTGTCACGTTCGTCAAGTGGCTCGACAACGAGCTGTCGCGCCTGGTGGATGAGCGCGCGGTGCTGAAGCACTTCGAGTGGCCGGAGAACAAGGAGGACGCGCTCCGCGAGGCGGCGTTCGGCTACTGCGACCTCAAGAAGCTGGAAGTGGAGGCCTCCTCATTCCGCGACGACGCGCGCCAGCCCTGCTCCACCGCACTGAAGAAGATGCAGGCGCTCTTCGAGAACTCACGTGTATGTGGCGGCTGTCGATGCGGCCAAAATGGCATTGCACGGCTGGAGCACGGCGTCTACAACCTCGCCCGCTTCCGGGACGGCGCCACGGGCAGGTACAGCCGGTTCCAGATCCCGTGCGAGTGGATGCAGCCAGACACCGGCATCGTCAGCCAGATCAAACTCCAGTCGGTGAAGTTAGCAATGAAGTACTTGAAGCGGGTCTCTTCTGAACTTGAGGCCATAAAGGGTGGTCCTGACGAAGAAGAACTAATGCTTCAAGGAGTGCGATTCGCCTTCAGGGTACACCAGTTTGCAGGCGGGTTCGACGTGGACACCATGCGGGCATTCCAAGAGCTCAAGGAGAAGGCATCTATGTGCCGGATACAACGACAAGAGCAGAACCGTCATCTAAGGAGGCAGCAAAAACTCGTTGCCAGGGCCTGA</cdnaseq>

Protein Sequence

<aaseq>MVAGRVKAAMGFQRSPKVSKSPAHVGRTPETPGRGSSSGSPAPGGSASKAVSFARSLGVHFPRSSAQVQPARAPPEVADLLRAIEQLQERESRLRVELLEQKILKETVAIVPFLEAELAAKSSELEKCKDTAARLESENMRLCAELDAAVLEVTSRKQRIVHMEKEMAELKKQQEAAAADADDCSSTASVSHEQPESASSAANPASLVQRGPPIPPPPPPVPPAAFKSKSYSASSRVSLPSTSAPSPSSSTSTSPTYSCSSSDTVTTPRNRKPELSKLPPIPPPPPMPALSVCGRAAAPPPPPPPPPARRTSGAASPAASGPRVTRVPEVVEFYHSLMRRDSRSRDGSGGGETANGGGVAATRDMIGEIENRSAHLLADESLVAVLTGTAACAESGEYVSDWHRGARCKRSECGIQSVVPIKSDVERQGDFIRFLIKEVEGAAFVDIEDVVTFVKWLDNELSRLVDERAVLKHFEWPENKEDALREAAFGYCDLKKLEVEASSFRDDARQPCSTALKKMQALFENSRVCGGCRCGQNGIARLEHGVYNLARFRDGATGRYSRFQIPCEWMQPDTGIVSQIKLQSVKLAMKYLKRVSSELEAIKGGPDEEELMLQGVRFAFRVHQFAGGFDVDTMRAFQELKEKASMCRIQRQEQNRHLRRQQKLVARA</aaseq>

Gene Sequence

<dnaseqindica>1..1134#1558..1683#1944..2075#2170..2351#2417..2579#3978..4112#4238..4372#ATGGTGGCCGGCCGCGTCAAGGCGGCCATGGGCTTCCAGCGCAGCCCCAAGGTGTCCAAGTCGCCGGCTCACGTCGGGCGGACGCCGGAGACTCCTGGCCGGGGGTCATCGTCTGGCTCCCCGGCGCCGGGCGGCTCGGCGTCCAAGGCTGTCTCCTTCGCGCGGTCCTTAGGCGTGCACTTCCCGCGCTCGTCGGCTCAGGTGCAGCCGGCGCGCGCCCCGCCGGAGGTCGCCGACCTGCTGCGCGCCATCGAGCAGCTCCAAGAGAGGGAGTCGCGCCTCCGCGTGGAGTTGCTGGAGCAGAAGATCCTGAAGGAGACCGTCGCCATCGTCCCATTCTTGGAGGCTGAGCTCGCCGCGAAGAGCAGCGAGCTGGAGAAATGCAAGGACACCGCCGCGCGACTGGAGTCCGAGAACATGCGGCTGTGCGCGGAGCTCGACGCTGCCGTGCTGGAGGTGACGAGTAGGAAACAGAGGATTGTTCACATGGAGAAGGAAATGGCGGAGCTGAAGAAGCAACAGGAGGCTGCCGCTGCTGACGCTGACGACTGCTCGTCCACGGCTTCGGTCTCACACGAGCAACCCGAGAGCGCCAGTTCCGCAGCCAATCCCGCGAGTCTAGTTCAACGTGGACCGCCCATTCCACCGCCCCCGCCGCCAGTGCCACCGGCGGCATTCAAGTCCAAGTCCTACTCTGCCTCGTCGCGCGTGTCGCTTCCGAGTACTTCGGCGCCCTCGCCATCTTCTTCCACCTCGACTTCACCAACGTACTCCTGCTCGTCGTCAGACACCGTGACCACGCCAAGAAACCGAAAACCAGAGCTCTCGAAGCTACCGCCCATACCTCCGCCACCACCAATGCCAGCACTCAGCGTTTGCGGCCGCGCAGCCGCGCCACCTCCTCCTCCGCCGCCTCCTCCGGCTCGGAGAACGTCGGGGGCAGCTTCGCCGGCTGCGTCGGGACCGCGCGTGACGAGAGTGCCCGAGGTGGTAGAGTTCTACCACTCACTGATGCGGAGGGATTCAAGATCAAGGGACGGGAGCGGCGGAGGCGAAACCGCCAACGGCGGCGGAGTGGCCGCGACGAGGGACATGATCGGCGAAATCGAGAATCGTTCGGCTCACCTCCTCGCGGTGCGTAATTACTCCTCCTGTTCCTCCCAACCGCACATGAAAAAACCGCATTAAGTTATCGCTAGTGAAGAGATCGCACATTCTTGAAGTAAACATTTTACTGTTAGTAAAGCAAGATTAGTGTTCAACGTTGCTTCGTGAGACCGTCACGTTTAAGGTGGTGGTGGTGGTAGTAGTGGTTCATGTTGGTGGGAGGGGTCATTCTGTGCAATCATGGAAAGAGAGTACATGTGTACAAGTGATTAGGTAGCACAGCGACGATAGTTATTGGTGAGCCTGCATACGCCATGCTGCCGTTCTTGCCGGTACACACACCATCGCAAACCAAAAAAAAAAAAACAAAGAGTGATATTCGATTATTAAAGTACTGGTTATGGCTCCGTTAGCATGGGCGAGGGCAGGCGATCATCTATCTATCTGCAGGACGAGAGTTTGGTGGCGGTGCTGACAGGAACAGCTGCATGCGCGGAGTCCGGAGAGTACGTGTCAGATTGGCACCGTGGGGCCAGGTGCAAACGCAGTGAATGTGGCATTCAAAGCGTGGTACCGGTTTGCCTAGCTAAATCGAGATTAGATTTGCGACTTACCACGGCCTCGAATTAACCCGGTCATTACTGCGACCGTGTAGTTGTCTCTTTCCCAACTGAATTACTCGTTTTAAGGATGATAGTCGCATTGAATTGGATGGAAAATATTCAGTGAACTGTTTTGCGACTGAATTACTACTCGTTTTAAGGATGATAATCGCACTGAATTGAATGACAAAGAGATGAAAAATATTTAGTGAACTGTTTTGCGTTTCACTGCAGATCAAATCGGACGTGGAGAGGCAGGGCGACTTCATCCGGTTCCTGATCAAGGAGGTGGAGGGCGCGGCGTTCGTCGACATCGAGGACGTTGTCACGTTCGTCAAGTGGCTCGACAACGAGCTGTCGCGCCTGGTACGCACTGTGCGCGCGCGTGGAACGATCACGAGAGGACGTCCGCTACGACGGTGAAACTAACCCGTGCCCGTGGCCGCGGCCGTGCGTGCAGGTGGATGAGCGCGCGGTGCTGAAGCACTTCGAGTGGCCGGAGAACAAGGAGGACGCGCTCCGCGAGGCGGCGTTCGGCTACTGCGACCTCAAGAAGCTGGAAGTGGAGGCCTCCTCATTCCGCGACGACGCGCGCCAGCCCTGCTCCACCGCACTGAAGAAGATGCAGGCGCTCTTCGAGAAGTAAGCCGCTGTACTTACCTGTATGCGTGTAGCTCGATTGGTTGCTCCCTAGCTGGCTCGGTTAGCTCACGTGTATGTGGCGGCTGTCGATGCGGCCAAAATGGCATTGCACGGCTGGAGCACGGCGTCTACAACCTCGCCCGCTTCCGGGACGGCGCCACGGGCAGGTACAGCCGGTTCCAGATCCCGTGCGAGTGGATGCAGCCAGACACCGGCATCGTCAGCCAGGTACCTACAACTTGCTAGCCCCGGCACGTTGTCGTGCCACTTAATTTGGCGGTTCACGCCGAGCGACACCTTAATTTTGGCAGCGTAGCTAGACCAACCCCCCTCGCGGGTGTGACCGTGACGAGCGTTCGTTTCGTTGGTTGGTTCTTTCACATGCGTGCACGAGGCGTATGTACGTAGCCGCGCTCGCGGTGGTACAGCGCAAAGGGAAATTCTAGGTGGATTTGGCCACAAGCCACGGCTGGGGCCTGGGAACCCGGGGACCGGGCCGACGGACGGAGGCGTGGCGTTTTGGTCGCCGCCCTCCGTTGGTGATACGGCGTACGGGCGTGGGACGCGGTGGTGTACGTGCACGTGAGCCTGTGCGGGTTGCATCTCGTGAGCTTGCCTTGTTCTCTCCTCGCGCTGCCCTTCTGTACAACAGCTACAGACACAAGAGGCTCATTACGCCTCGACAGCCGCTTCGTCCTGCGCTGCGTATGTGCGTCAACCGGAACAGCGCGAACGATCCGGATTTGTCAGCGATGCGTATACTTAGCTCAGGCTGAGGAACGTTTCGTCATTTCCATGGTCCAGTGCACCGTGTGGATGTTTGTGTGGATTTGCTGCTTGTGTGTTTCGGCAGGATTTGGAGCCTCACGAGAGAAGCTAAGCTAGTACTACTAGTGTAAAATTTCTTGGATACCGTTTGATCTGAGATCTACAGTTTTGTCACTTCGTTAGATTGTAAGTAGCGAGAACATCTGACAAGTGGATAGTTGTTCTGTTCTGCGGCAGCTAGGTTTGTTTAAGGCTTCTGAAAGAAAAAGATAATTGTCACGTTTGGCTTGAATAAGTTAAGCATTTTCTGATCACTACGTACTGAAAGATGGGGCTCCATGGCTGCTCAGGTGTCAGATTTCCCTCATGCATCTGTGACTGTGAGCATGCATTTGCATTTGGTACCTTTGCAGCTTTGCTGATCAATCGGGACAATTCTTCACCTGTGCACATCTTATCGTTGTAGACTTGTAGAAAGAAGACATGATATGAACTATTATGAAGTTTGTAATTGGCCTATCAGTTTGTAAATTGCACATGAAGTCTTTACATTTACAGTTTATTGCATTCGCGAAAAAACATTTACAGTTTACAAATTGGTAGGAAAATTAGAAACATAAACACATGCCCTCATCAATCTGCAATCACTGAGTTGATTGGTCTGTCCTGTCGTTTGGCCGCTTCATATCCTAACTTTTGAGGCTAACAAATGAAAGCAGTCCTCTCTTTCTCTGAATGATGTCCATTTGATTCATGGGCAAGTAATTTGGGCATATCTGTGATTTCTTTTATCGATAAAATGCATGAATAAACGTGTACGTTTGATGATTACTCATGAATGTAACCTTTGGTGTACAGATCAAACTCCAGTCGGTGAAGTTAGCAATGAAGTACTTGAAGCGGGTCTCTTCTGAACTTGAGGCCATAAAGGGTGGTCCTGACGAAGAAGAACTAATGCTTCAAGGAGTGCGATTCGCCTTCAGGGTACACCAGGTATATATTTACTCGCTAAGATGTTAAGATGCGCATGAATAATTTCTGAAAAGAATTCATGCTTACATTTTCTTCCAAGGTGCAACTTTGAAACGAATCACATCCATACTCCTCGTTTGCTGCAGTTTGCAGGCGGGTTCGACGTGGACACCATGCGGGCATTCCAAGAGCTCAAGGAGAAGGCATCTATGTGCCGGATACAACGACAAGAGCAGAACCGTCATCTAAGGAGGCAGCAAAAACTCGTTGCCAGGGCCTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA004124